RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 TRBV6-4A0A1B0GX49 114 aa10.13□□□□□ -0.79
CX3CL1-204ENST00000565912 HRCT1Q6UXD1 115 aa10.13□□□□□ -0.79
CX3CL1-204ENST00000565912 K7ERS5 55 aa10.12□□□□□ -0.79
CX3CL1-204ENST00000565912 C6orf99Q4VX62 202 aa10.12□□□□□ -0.79
CX3CL1-204ENST00000565912 M0QY20 66 aa10.12□□□□□ -0.79
CX3CL1-204ENST00000565912 C9orf85Q96MD7 179 aa10.12□□□□□ -0.79
CX3CL1-204ENST00000565912 LINC00526Q96FQ7 95 aa10.12□□□□□ -0.79
CX3CL1-204ENST00000565912 SONP18583 2426 aaKnown RBP10.12□□□□□ -0.79
CX3CL1-204ENST00000565912 LY6LH3BQJ8 138 aa10.12□□□□□ -0.79
CX3CL1-204ENST00000565912 CCKP06307 115 aa10.12□□□□□ -0.79
CX3CL1-204ENST00000565912 C3orf84H3BNL1 204 aa10.11□□□□□ -0.79
CX3CL1-204ENST00000565912 MLST8Q9BVC4 326 aa10.11□□□□□ -0.79
CX3CL1-204ENST00000565912 ZFAND3Q9H8U3 227 aa10.11□□□□□ -0.79
CX3CL1-204ENST00000565912 CSPG4Q6UVK1 2322 aa10.1□□□□□ -0.79
CX3CL1-204ENST00000565912 ZNF843Q8N446 348 aa10.1□□□□□ -0.79
CX3CL1-204ENST00000565912 UBE2D4Q9Y2X8 147 aa10.1□□□□□ -0.79
CX3CL1-204ENST00000565912 LY6G6CO95867 125 aa10.09□□□□□ -0.79
CX3CL1-204ENST00000565912 RBX1P62877 108 aa10.09□□□□□ -0.79
CX3CL1-204ENST00000565912 OTOGLQ3ZCN5 2332 aa10.09□□□□□ -0.79
CX3CL1-204ENST00000565912 SORL1Q92673 2214 aa10.09□□□□□ -0.79
CX3CL1-204ENST00000565912 KPRPQ5T749 579 aaPredicted RBP10.09□□□□□ -0.79
CX3CL1-204ENST00000565912 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
CX3CL1-204ENST00000565912 A8MZ25 164 aa10.08□□□□□ -0.8
CX3CL1-204ENST00000565912 SRCAPQ6ZRS2 3230 aa10.08□□□□□ -0.8
CX3CL1-204ENST00000565912 TRIAP1O43715 76 aa10.08□□□□□ -0.8
CX3CL1-204ENST00000565912 EBI3Q14213 229 aa10.08□□□□□ -0.8
CX3CL1-204ENST00000565912 PCDH15Q96QU1 1955 aa10.08□□□□□ -0.8
CX3CL1-204ENST00000565912 Q6ZPA2 131 aa10.08□□□□□ -0.8
CX3CL1-204ENST00000565912 CRIP1P50238 77 aa10.07□□□□□ -0.8
CX3CL1-204ENST00000565912 MT-ATP8P03928 68 aa10.07□□□□□ -0.8
CX3CL1-204ENST00000565912 MAPKAPK5-AS1Q8N8E1 139 aa10.07□□□□□ -0.8
CX3CL1-204ENST00000565912 ZNF702PQ9H963 129 aa10.07□□□□□ -0.8
CX3CL1-204ENST00000565912 LOC100131303A0A0U1RQF7 123 aa10.07□□□□□ -0.8
CX3CL1-204ENST00000565912 FAM236DA0A1B0GTK5 79 aa10.07□□□□□ -0.8
CX3CL1-204ENST00000565912 FAM236CP0DP71 79 aa10.07□□□□□ -0.8
CX3CL1-204ENST00000565912 WFDC13Q8IUB5 93 aa10.07□□□□□ -0.8
CX3CL1-204ENST00000565912 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
CX3CL1-204ENST00000565912 LINC01006Q8NI28 216 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 PTPN13Q12923 2485 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 CLUHP3Q96NS8 147 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 C18orf65Q6ZTR6 163 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 CUL9Q8IWT3 2517 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 ARHGAP21Q5T5U3 1957 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 RPL37AP8A6NKH3 93 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 ATP5EP2Q5VTU8 51 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 CD164L2Q6UWJ8 174 aa10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 ZNF706Q9Y5V0 76 aaPredicted RBP10.06□□□□□ -0.8
CX3CL1-204ENST00000565912 UBE2D3P61077 147 aa10.05□□□□□ -0.8
CX3CL1-204ENST00000565912 C11orf71Q6IPW1 123 aa10.05□□□□□ -0.8
CX3CL1-204ENST00000565912 TRBV6-5A0A0K0K1A5 114 aa10.05□□□□□ -0.8
CX3CL1-204ENST00000565912 RNF185Q96GF1 192 aa10.05□□□□□ -0.8
CX3CL1-204ENST00000565912 FSTL3O95633 263 aa10.05□□□□□ -0.8
CX3CL1-204ENST00000565912 Q6ZQY7 126 aa10.05□□□□□ -0.8
CX3CL1-204ENST00000565912 IGLV9-49A0A0B4J1Y8 123 aa10.04□□□□□ -0.8
CX3CL1-204ENST00000565912 M0R378 163 aa10.04□□□□□ -0.8
CX3CL1-204ENST00000565912 ZNF295-AS1Q8N0V1 137 aa10.04□□□□□ -0.8
CX3CL1-204ENST00000565912 IGLV4-69A0A075B6H9 119 aa10.04□□□□□ -0.8
CX3CL1-204ENST00000565912 UQCRQO14949 82 aa10.04□□□□□ -0.8
CX3CL1-204ENST00000565912 NCOA6Q14686 2063 aaPredicted RBP10.03□□□□□ -0.8
CX3CL1-204ENST00000565912 PRM2P04554 102 aa10.03□□□□□ -0.8
CX3CL1-204ENST00000565912 DHRS4-AS1Q9P1J3 65 aa10.03□□□□□ -0.8
CX3CL1-204ENST00000565912 MBD6Q96DN6 1003 aa10.03□□□□□ -0.8
CX3CL1-204ENST00000565912 PRR15LQ9BU68 103 aa10.03□□□□□ -0.8
CX3CL1-204ENST00000565912 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
CX3CL1-204ENST00000565912 LELP1Q5T871 98 aa10.03□□□□□ -0.8
CX3CL1-204ENST00000565912 EIF4EBP1Q13541 118 aaPredicted RBP10.03□□□□□ -0.8
CX3CL1-204ENST00000565912 LOC107984640A0A0U1RRK4 108 aa10.02□□□□□ -0.81
CX3CL1-204ENST00000565912 TSHBP01222 138 aa10.02□□□□□ -0.81
CX3CL1-204ENST00000565912 TRBV27A0A0K0K1C4 114 aa10.02□□□□□ -0.81
CX3CL1-204ENST00000565912 LINC00959A0A1B0GUT2 108 aa10.02□□□□□ -0.81
CX3CL1-204ENST00000565912 ANKHD1Q8IWZ3 2542 aaKnown RBP10.02□□□□□ -0.81
CX3CL1-204ENST00000565912 MUC22E2RYF6 1773 aaPredicted RBP10.01□□□□□ -0.81
CX3CL1-204ENST00000565912 PYGO1Q9Y3Y4 419 aa10.01□□□□□ -0.81
CX3CL1-204ENST00000565912 FREM1Q5H8C1 2179 aa10.01□□□□□ -0.81
CX3CL1-204ENST00000565912 PRR14LQ5THK1 2151 aa10.01□□□□□ -0.81
CX3CL1-204ENST00000565912 NANOS2P60321 138 aaKnown RBP10.01□□□□□ -0.81
CX3CL1-204ENST00000565912 PLAC8L1A1L4L8 177 aa10.01□□□□□ -0.81
CX3CL1-204ENST00000565912 CACNA1AO00555 2505 aa10.01□□□□□ -0.81
CX3CL1-204ENST00000565912 U3KQK5 164 aa10□□□□□ -0.81
CX3CL1-204ENST00000565912 IGHV4-30-4P0DP06 118 aa10□□□□□ -0.81
CX3CL1-204ENST00000565912 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
CX3CL1-204ENST00000565912 PRR4Q16378 134 aa10□□□□□ -0.81
CX3CL1-204ENST00000565912 Q6ZS46 218 aa10□□□□□ -0.81
CX3CL1-204ENST00000565912 NDUFC2-KCTD14E9PQ53 114 aa9.99□□□□□ -0.81
CX3CL1-204ENST00000565912 FAM240AA0A1B0GVK7 77 aa9.99□□□□□ -0.81
CX3CL1-204ENST00000565912 MRPS12O15235 138 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-204ENST00000565912 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
CX3CL1-204ENST00000565912 PRR9Q5T870 116 aa9.99□□□□□ -0.81
CX3CL1-204ENST00000565912 SNURFQ9Y675 71 aa9.99□□□□□ -0.81
CX3CL1-204ENST00000565912 CEP192Q8TEP8 1941 aa9.99□□□□□ -0.81
CX3CL1-204ENST00000565912 SERP1Q9Y6X1 66 aa9.99□□□□□ -0.81
CX3CL1-204ENST00000565912 CRIP3Q6Q6R5 217 aa9.98□□□□□ -0.81
CX3CL1-204ENST00000565912 Q8N9L7 120 aa9.98□□□□□ -0.81
CX3CL1-204ENST00000565912 A0A0U1RQV1 116 aa9.98□□□□□ -0.81
CX3CL1-204ENST00000565912 UBE2D2P62837 147 aa9.98□□□□□ -0.81
CX3CL1-204ENST00000565912 FAM19A3Q7Z5A8 133 aa9.97□□□□□ -0.81
CX3CL1-204ENST00000565912 IGLV2-11P01706 119 aa9.97□□□□□ -0.81
CX3CL1-204ENST00000565912 SMIM11BQ8TCY0 68 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms