RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PAPPA-AS1Q5QFB9 102 aa5.3□□□□□ -1.56
CDH1-208ENST00000565810 Q8N976 141 aa5.3□□□□□ -1.56
CDH1-208ENST00000565810 TMEM141Q96I45 108 aa5.3□□□□□ -1.56
CDH1-208ENST00000565810 PYGO1Q9Y3Y4 419 aa5.3□□□□□ -1.56
CDH1-208ENST00000565810 KMT2AQ03164 3969 aa5.3□□□□□ -1.56
CDH1-208ENST00000565810 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.29□□□□□ -1.56
CDH1-208ENST00000565810 LEPROTL1O95214 131 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 NPSP0C0P6 89 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 MRPS36P82909 103 aaKnown RBP5.29□□□□□ -1.56
CDH1-208ENST00000565810 ERASQ7Z444 233 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 FAM19A2Q8N3H0 131 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 ZNF664Q8N3J9 261 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 UBE2WQ96B02 151 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 TIMM17AQ99595 171 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 VCX2Q9H322 139 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 CDC42SE2Q9NRR3 84 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 HSPB8Q9UJY1 196 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 KLK12Q9UKR0 248 aa5.29□□□□□ -1.56
CDH1-208ENST00000565810 IGLV4-60A0A075B6I1 120 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 TRAV8-3A0A0A6YYJ7 113 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 IGIPA6NJ69 53 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 IBA57-AS1B1ANH7 110 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 NUPR1O60356 82 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 S100A2P29034 98 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 LINC00310P59036 64 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 TEX43Q6ZNM6 134 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 LINC00269Q8N2A0 174 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 Q8N3U1 123 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 RMI2Q96E14 147 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 C2orf88Q9BSF0 95 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 DNAH6Q9C0G6 4158 aa5.28□□□□□ -1.56
CDH1-208ENST00000565810 IGLV4-3A0A075B6K6 122 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 A0A096LNJ9 63 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 IGKV3OR2-268A0A0C4DH90 116 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 LCE6AA0A183 80 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 M0R2N4 97 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 PRSS1P07477 247 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 FABP4P15090 132 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 REG3AQ06141 175 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 SS18Q15532 418 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 PDZD11Q5EBL8 140 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 Q6ZUT4 128 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 IFI27L1Q96BM0 104 aa5.27□□□□□ -1.57
CDH1-208ENST00000565810 TMA7Q9Y2S6 64 aaKnown RBP5.27□□□□□ -1.57
CDH1-208ENST00000565810 DNAH2Q9P225 4427 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 TRAV13-1A0A0B4J241 112 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 TRAV8-4A0A0B4J246 113 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 IFITM10A6NMD0 228 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 CCL25O15444 150 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 SNRPEP62304 92 aaKnown RBP5.26□□□□□ -1.57
CDH1-208ENST00000565810 PMVKQ15126 192 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 MIAQ16674 131 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 RNASE13Q5GAN3 156 aaKnown RBP5.26□□□□□ -1.57
CDH1-208ENST00000565810 CLPSL2Q6UWE3 100 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 NFE4Q86UQ8 179 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 PACRGQ96M98 296 aaPredicted RBP5.26□□□□□ -1.57
CDH1-208ENST00000565810 OPRPNQ99935 248 aaPredicted RBP5.26□□□□□ -1.57
CDH1-208ENST00000565810 C1orf43Q9BWL3 253 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 TM2D2Q9BX73 214 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 MAP1LC3CQ9BXW4 147 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 Q9HAA7 133 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 PRR34Q9NV39 138 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 COX11Q9Y6N1 276 aa5.26□□□□□ -1.57
CDH1-208ENST00000565810 IGKV2D-24A0A075B6R9 120 aa5.25□□□□□ -1.57
CDH1-208ENST00000565810 ENHOQ6UWT2 76 aa5.25□□□□□ -1.57
CDH1-208ENST00000565810 BAALCQ8WXS3 180 aa5.25□□□□□ -1.57
CDH1-208ENST00000565810 AMELXQ99217 191 aa5.25□□□□□ -1.57
CDH1-208ENST00000565810 LINC00959A0A1B0GUT2 108 aa5.24□□□□□ -1.57
CDH1-208ENST00000565810 C5orf52A6NGY3 159 aa5.24□□□□□ -1.57
CDH1-208ENST00000565810 SEC11AP67812 179 aa5.24□□□□□ -1.57
CDH1-208ENST00000565810 C1orf134Q5TEV5 83 aa5.24□□□□□ -1.57
CDH1-208ENST00000565810 HIST3H2BBQ8N257 126 aa5.24□□□□□ -1.57
CDH1-208ENST00000565810 C6orf223Q8N319 242 aa5.24□□□□□ -1.57
CDH1-208ENST00000565810 CST9LQ9H4G1 147 aa5.24□□□□□ -1.57
CDH1-208ENST00000565810 TENM2Q9NT68 2774 aa5.24□□□□□ -1.57
CDH1-208ENST00000565810 DNAH10Q8IVF4 4471 aa5.24□□□□□ -1.57
CDH1-208ENST00000565810 IGLV10-54A0A075B6I4 117 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 TRAV12-1A0A0B4J245 112 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 PRSS29PA6NIE9 313 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 H0Y8G0 127 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 PSCAO43653 123 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 XCL1P47992 114 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 ZC2HC1BQ5TFG8 222 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 Q6ZR54 194 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 LINC00173Q6ZV60 143 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 CHCHD10Q8WYQ3 142 aaPredicted RBP5.23□□□□□ -1.57
CDH1-208ENST00000565810 FAM104AQ969W3 186 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 KRTAP1-5Q9BYS1 174 aa5.23□□□□□ -1.57
CDH1-208ENST00000565810 GEMIN7Q9H840 131 aaKnown RBP5.23□□□□□ -1.57
CDH1-208ENST00000565810 KMT2CQ8NEZ4 4911 aaKnown RBP5.22□□□□□ -1.57
CDH1-208ENST00000565810 GAGE12HA6NDE8 117 aa5.22□□□□□ -1.57
CDH1-208ENST00000565810 UBE2D1P51668 147 aa5.22□□□□□ -1.57
CDH1-208ENST00000565810 HERVK_113P63121 156 aa5.22□□□□□ -1.57
CDH1-208ENST00000565810 CD164L2Q6UWJ8 174 aa5.22□□□□□ -1.57
CDH1-208ENST00000565810 HIST1H2BLQ99880 126 aa5.22□□□□□ -1.57
CDH1-208ENST00000565810 CHTOPQ9Y3Y2 248 aaKnown RBP5.22□□□□□ -1.57
CDH1-208ENST00000565810 DNAH17Q9UFH2 4485 aa5.21□□□□□ -1.57
CDH1-208ENST00000565810 TINCRA0A1B0GVN0 87 aa5.21□□□□□ -1.58
CDH1-208ENST00000565810 C20orf202A1L168 122 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms