RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 HYDINQ4G0P3 5121 aa13.19□□□□□ -0.3
CSPG4P13-201ENST00000565545 H0Y8G0 127 aa13.19□□□□□ -0.3
CSPG4P13-201ENST00000565545 FGF6P10767 208 aa13.19□□□□□ -0.3
CSPG4P13-201ENST00000565545 ZNF25P17030 456 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P13-201ENST00000565545 MRPS36P82909 103 aaKnown RBP13.19□□□□□ -0.3
CSPG4P13-201ENST00000565545 PMVKQ15126 192 aa13.19□□□□□ -0.3
CSPG4P13-201ENST00000565545 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
CSPG4P13-201ENST00000565545 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
CSPG4P13-201ENST00000565545 A0A087WX48 190 aa13.18□□□□□ -0.3
CSPG4P13-201ENST00000565545 PKIAP61925 76 aa13.18□□□□□ -0.3
CSPG4P13-201ENST00000565545 LELP1Q5T871 98 aa13.18□□□□□ -0.3
CSPG4P13-201ENST00000565545 AMMECR1LQ6DCA0 310 aa13.18□□□□□ -0.3
CSPG4P13-201ENST00000565545 LINC00518Q8N0U6 118 aa13.18□□□□□ -0.3
CSPG4P13-201ENST00000565545 CHCHD5Q9BSY4 110 aa13.18□□□□□ -0.3
CSPG4P13-201ENST00000565545 LYPD5Q6UWN5 251 aa13.17□□□□□ -0.3
CSPG4P13-201ENST00000565545 TMEM101Q96IK0 257 aa13.17□□□□□ -0.3
CSPG4P13-201ENST00000565545 VCX2Q9H322 139 aa13.17□□□□□ -0.3
CSPG4P13-201ENST00000565545 ODF1Q14990 250 aa13.16□□□□□ -0.3
CSPG4P13-201ENST00000565545 AMELXQ99217 191 aa13.16□□□□□ -0.3
CSPG4P13-201ENST00000565545 PRSS29PA6NIE9 313 aa13.15□□□□□ -0.3
CSPG4P13-201ENST00000565545 GAGE6Q13070 117 aa13.15□□□□□ -0.3
CSPG4P13-201ENST00000565545 OR5A1Q8NGJ0 315 aa13.15□□□□□ -0.3
CSPG4P13-201ENST00000565545 C12orf57Q99622 126 aa13.15□□□□□ -0.3
CSPG4P13-201ENST00000565545 CST9LQ9H4G1 147 aa13.15□□□□□ -0.3
CSPG4P13-201ENST00000565545 A0A1B0GUV1 79 aa13.14□□□□□ -0.31
CSPG4P13-201ENST00000565545 F8VRH5 84 aa13.14□□□□□ -0.31
CSPG4P13-201ENST00000565545 LY6G6CO95867 125 aa13.14□□□□□ -0.31
CSPG4P13-201ENST00000565545 CEMP1Q6PRD7 247 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-201ENST00000565545 TEX43Q6ZNM6 134 aa13.14□□□□□ -0.31
CSPG4P13-201ENST00000565545 FAM104AQ969W3 186 aa13.14□□□□□ -0.31
CSPG4P13-201ENST00000565545 OPRPNQ99935 248 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P13-201ENST00000565545 CHTOPQ9Y3Y2 248 aaKnown RBP13.14□□□□□ -0.31
CSPG4P13-201ENST00000565545 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
CSPG4P13-201ENST00000565545 S100A12P80511 92 aa13.13□□□□□ -0.31
CSPG4P13-201ENST00000565545 DPM2O94777 84 aa13.12□□□□□ -0.31
CSPG4P13-201ENST00000565545 ZNF664Q8N3J9 261 aa13.12□□□□□ -0.31
CSPG4P13-201ENST00000565545 LINC00476Q8WZB0 136 aa13.12□□□□□ -0.31
CSPG4P13-201ENST00000565545 C2orf88Q9BSF0 95 aa13.12□□□□□ -0.31
CSPG4P13-201ENST00000565545 KRTAP17-1Q9BYP8 105 aa13.12□□□□□ -0.31
CSPG4P13-201ENST00000565545 CDC42SE2Q9NRR3 84 aa13.12□□□□□ -0.31
CSPG4P13-201ENST00000565545 ALMS1Q8TCU4 4167 aa13.11□□□□□ -0.31
CSPG4P13-201ENST00000565545 TMEM262E9PQX1 116 aa13.11□□□□□ -0.31
CSPG4P13-201ENST00000565545 PLNP26678 52 aa13.11□□□□□ -0.31
CSPG4P13-201ENST00000565545 Q6ZUT4 128 aa13.11□□□□□ -0.31
CSPG4P13-201ENST00000565545 MRPL35Q9NZE8 188 aaKnown RBP13.11□□□□□ -0.31
CSPG4P13-201ENST00000565545 PLECQ15149 4684 aaKnown RBP13.11□□□□□ -0.31
CSPG4P13-201ENST00000565545 IGLL5B9A064 214 aa13.1□□□□□ -0.31
CSPG4P13-201ENST00000565545 IGKCP01834 107 aa13.1□□□□□ -0.31
CSPG4P13-201ENST00000565545 ESRGQ1W209 222 aa13.09□□□□□ -0.31
CSPG4P13-201ENST00000565545 CDPF1Q6NVV7 123 aa13.09□□□□□ -0.31
CSPG4P13-201ENST00000565545 PMCHL2Q9BQD1 86 aa13.09□□□□□ -0.31
CSPG4P13-201ENST00000565545 TRAV9-2A0A087WT02 112 aa13.08□□□□□ -0.32
CSPG4P13-201ENST00000565545 NUPR2A6NF83 97 aa13.08□□□□□ -0.32
CSPG4P13-201ENST00000565545 RBX1P62877 108 aa13.08□□□□□ -0.32
CSPG4P13-201ENST00000565545 ZC2HC1BQ5TFG8 222 aa13.08□□□□□ -0.32
CSPG4P13-201ENST00000565545 VAMP8Q9BV40 100 aa13.08□□□□□ -0.32
CSPG4P13-201ENST00000565545 HSBP1L1C9JCN9 74 aa13.07□□□□□ -0.32
CSPG4P13-201ENST00000565545 ATOH7Q8N100 152 aa13.07□□□□□ -0.32
CSPG4P13-201ENST00000565545 KLK5Q9Y337 293 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P13-201ENST00000565545 IGLV4-69A0A075B6H9 119 aa13.06□□□□□ -0.32
CSPG4P13-201ENST00000565545 IGLC3P0DOY3 106 aa13.06□□□□□ -0.32
CSPG4P13-201ENST00000565545 TCTAP57738 103 aa13.06□□□□□ -0.32
CSPG4P13-201ENST00000565545 MPV17L2Q567V2 206 aa13.06□□□□□ -0.32
CSPG4P13-201ENST00000565545 NFE4Q86UQ8 179 aa13.06□□□□□ -0.32
CSPG4P13-201ENST00000565545 IGLV4-60A0A075B6I1 120 aa13.05□□□□□ -0.32
CSPG4P13-201ENST00000565545 UBE2D1P51668 147 aa13.05□□□□□ -0.32
CSPG4P13-201ENST00000565545 CCL18P55774 89 aa13.05□□□□□ -0.32
CSPG4P13-201ENST00000565545 SEC11AP67812 179 aa13.05□□□□□ -0.32
CSPG4P13-201ENST00000565545 RNASE13Q5GAN3 156 aaKnown RBP13.05□□□□□ -0.32
CSPG4P13-201ENST00000565545 FAM19A3Q7Z5A8 133 aa13.05□□□□□ -0.32
CSPG4P13-201ENST00000565545 TINCRA0A1B0GVN0 87 aa13.03□□□□□ -0.32
CSPG4P13-201ENST00000565545 CCL25O15444 150 aa13.03□□□□□ -0.32
CSPG4P13-201ENST00000565545 MRPS16Q9Y3D3 137 aaKnown RBP13.03□□□□□ -0.32
CSPG4P13-201ENST00000565545 A0A0J9YXV3 536 aa13.02□□□□□ -0.33
CSPG4P13-201ENST00000565545 C11orf86A6NJI1 115 aa13.02□□□□□ -0.33
CSPG4P13-201ENST00000565545 CHAC1Q9BUX1 264 aa13.02□□□□□ -0.33
CSPG4P13-201ENST00000565545 APLNQ9ULZ1 77 aa13.02□□□□□ -0.33
CSPG4P13-201ENST00000565545 SPATA45Q537H7 98 aa13.01□□□□□ -0.33
CSPG4P13-201ENST00000565545 PAM16Q9Y3D7 125 aa13.01□□□□□ -0.33
CSPG4P13-201ENST00000565545 hDV102S1A0JD36 115 aa13□□□□□ -0.33
CSPG4P13-201ENST00000565545 HERVK_113P63121 156 aa13□□□□□ -0.33
CSPG4P13-201ENST00000565545 WFDC10BQ8IUB3 73 aa13□□□□□ -0.33
CSPG4P13-201ENST00000565545 GEMIN7Q9H840 131 aaKnown RBP13□□□□□ -0.33
CSPG4P13-201ENST00000565545 TRAV13-1A0A0B4J241 112 aa12.99□□□□□ -0.33
CSPG4P13-201ENST00000565545 ANGP03950 147 aaKnown RBP12.99□□□□□ -0.33
CSPG4P13-201ENST00000565545 MAJINQ3KP22 176 aa12.99□□□□□ -0.33
CSPG4P13-201ENST00000565545 UPK3BQ9BT76 320 aa12.99□□□□□ -0.33
CSPG4P13-201ENST00000565545 LINC00588Q9Y4M8 146 aa12.99□□□□□ -0.33
CSPG4P13-201ENST00000565545 HERVK_113P61574 105 aa12.98□□□□□ -0.33
CSPG4P13-201ENST00000565545 SS18Q15532 418 aa12.98□□□□□ -0.33
CSPG4P13-201ENST00000565545 LINC01556Q5JQF7 62 aa12.98□□□□□ -0.33
CSPG4P13-201ENST00000565545 LINC00242Q5T6M2 205 aa12.98□□□□□ -0.33
CSPG4P13-201ENST00000565545 STPG4Q8N801 248 aa12.98□□□□□ -0.33
CSPG4P13-201ENST00000565545 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
CSPG4P13-201ENST00000565545 LINC00959A0A1B0GUT2 108 aa12.97□□□□□ -0.33
CSPG4P13-201ENST00000565545 ZNF22P17026 224 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P13-201ENST00000565545 TMEM170BQ5T4T1 132 aa12.97□□□□□ -0.33
CSPG4P13-201ENST00000565545 LINC00269Q8N2A0 174 aa12.97□□□□□ -0.33
CSPG4P13-201ENST00000565545 DNAH10OSP0CZ25 163 aa12.96□□□□□ -0.33
CSPG4P13-201ENST00000565545 REG3AQ06141 175 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms