RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 IGLV1-51P01701 117 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 RBP4P02753 201 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 CSN2P05814 226 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 SAA2P0DJI9 122 aaPredicted RBP0.93□□□□□ -2.26
PALB2-203ENST00000565038 MGST1P10620 155 aaKnown RBP0.93□□□□□ -2.26
PALB2-203ENST00000565038 FXYD3Q14802 87 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 HMGN3Q15651 99 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 SNCBQ16143 134 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 Q1T7F1 81 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 ZNF833PQ6ZTB9 187 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 STX19Q8N4C7 294 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 GRPEL2Q8TAA5 225 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 NEK7Q8TDX7 302 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 C9orf16Q9BUW7 83 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 TMEM138Q9NPI0 162 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 MRPL36Q9P0J6 103 aaKnown RBP0.93□□□□□ -2.26
PALB2-203ENST00000565038 METTL1Q9UBP6 276 aaKnown RBP0.93□□□□□ -2.26
PALB2-203ENST00000565038 LSM2Q9Y333 95 aaKnown RBP0.93□□□□□ -2.26
PALB2-203ENST00000565038 MUC17Q685J3 4493 aa0.93□□□□□ -2.26
PALB2-203ENST00000565038 MUC2Q02817 5179 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 TRBV6-7A0A0A0MS04 114 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 A0A0D9SG52 128 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 FUOMA2VDF0 154 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 C2orf70A6NJV1 201 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 M0QZK8 103 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 HMGB3O15347 200 aaKnown RBP0.92□□□□□ -2.26
PALB2-203ENST00000565038 CYB5BO43169 146 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 LY6G6CO95867 125 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 CTSDP07339 412 aaPredicted RBP0.92□□□□□ -2.26
PALB2-203ENST00000565038 CBLN1P23435 193 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 ZNF137PP52743 207 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 TPPP2P59282 170 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 LSM3P62310 102 aaKnown RBP0.92□□□□□ -2.26
PALB2-203ENST00000565038 RHOGP84095 191 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 PLGLAQ15195 96 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 RHEBQ15382 184 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 MPV17LQ2QL34 196 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 IAH1Q2TAA2 248 aaPredicted RBP0.92□□□□□ -2.26
PALB2-203ENST00000565038 HSD17B12Q53GQ0 312 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 AKIRIN2Q53H80 203 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 SPINK9Q5DT21 86 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 RNASE10Q5GAN6 216 aaKnown RBP0.92□□□□□ -2.26
PALB2-203ENST00000565038 Q8IYB0 196 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 TTC9CQ8N5M4 171 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 FAM24BQ8N5W8 94 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 C9orf163Q8N9P6 203 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 C15orf53Q8NAA6 179 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 C4orf3Q8WVX3 66 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 GPR146Q96CH1 333 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 OR4C12Q96R67 309 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 S100A13Q99584 98 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 ATG5Q9H1Y0 275 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 COA4Q9NYJ1 87 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 OR5AC2Q9NZP5 309 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 APLNQ9ULZ1 77 aa0.92□□□□□ -2.26
PALB2-203ENST00000565038 IGKV3D-7A0A0C4DH55 119 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 IGKV3OR2-268A0A0C4DH90 116 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 F8W036 122 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 GGCTO75223 188 aaKnown RBP0.91□□□□□ -2.26
PALB2-203ENST00000565038 TCL1BO95988 128 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 CD2P06729 351 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 SAA1P0DJI8 122 aaPredicted RBP0.91□□□□□ -2.26
PALB2-203ENST00000565038 SDC2P34741 201 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 G6PCP35575 357 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 ETV6P41212 452 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 FXYD4P59646 89 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 YPEL3P61236 119 aaPredicted RBP0.91□□□□□ -2.26
PALB2-203ENST00000565038 PPP3R1P63098 170 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 WT1-ASQ06250 92 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 ZNF846Q147U1 533 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 CCDC58Q4VC31 144 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 LYRM7Q5U5X0 104 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 TOMM20LQ6UXN7 152 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 Q6ZQT0 140 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 ZNF818PQ6ZRF7 136 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 C8orf59Q8N0T1 100 aaPredicted RBP0.91□□□□□ -2.26
PALB2-203ENST00000565038 TMEM167AQ8TBQ9 72 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 TAS2R8Q9NYW2 309 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 ABRACLQ9P1F3 81 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 JPT1Q9UK76 154 aa0.91□□□□□ -2.26
PALB2-203ENST00000565038 IGKV2-40A0A087WW87 121 aaPredicted RBP0.9□□□□□ -2.27
PALB2-203ENST00000565038 TRAV1-2A0A0B4J238 106 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 TRDV1A0A1B0GX56 115 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 IGLC7A0M8Q6 106 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 OR2T8A6NH00 312 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 IFITM5A6NNB3 132 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 I3L2K1 104 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 K7EIM0 57 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 IGKV2D-40P01614 121 aaPredicted RBP0.9□□□□□ -2.27
PALB2-203ENST00000565038 OR4E1P0C645 316 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 TRAPPC2P0DI81 140 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 TRAPPC2BP0DI82 140 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 HIST1H1DP16402 221 aaKnown RBP0.9□□□□□ -2.27
PALB2-203ENST00000565038 SRIP30626 198 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 INSL3P51460 131 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 DEFB131AP59861 70 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 VBP1P61758 197 aa0.9□□□□□ -2.27
PALB2-203ENST00000565038 EIF5AP63241 154 aaKnown RBP0.9□□□□□ -2.27
PALB2-203ENST00000565038 KLK9Q2XQG4 91 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms