RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ERASQ7Z444 233 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 OR10D4PQ8NGN7 298 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 IFI27L1Q96BM0 104 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 TMEM141Q96I45 108 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 TIMM17AQ99595 171 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 SPANXA1Q9NS26 97 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 APLNQ9ULZ1 77 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 UBE2D4Q9Y2X8 147 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 TRAV8-6A0A0B4J262 113 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 TMEM262E9PQX1 116 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 KRTDAPP60985 99 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 PKIAP61925 76 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 DGAT2L7PQ6IED9 249 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 MRPL52Q86TS9 123 aaKnown RBP7.6□□□□□ -1.19
SF3B3-205ENST00000564899 TMEM101Q96IK0 257 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 TIMM21Q9BVV7 248 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 MAP1LC3CQ9BXW4 147 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 PYGO1Q9Y3Y4 419 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 PKD1P98161 4303 aa7.6□□□□□ -1.19
SF3B3-205ENST00000564899 HSPG2P98160 4391 aa7.59□□□□□ -1.19
SF3B3-205ENST00000564899 ZNF25P17030 456 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-205ENST00000564899 CCL18P55774 89 aa7.59□□□□□ -1.19
SF3B3-205ENST00000564899 TCTAP57738 103 aa7.59□□□□□ -1.19
SF3B3-205ENST00000564899 Q6ZN92 141 aa7.59□□□□□ -1.19
SF3B3-205ENST00000564899 OR5A1Q8NGJ0 315 aa7.59□□□□□ -1.19
SF3B3-205ENST00000564899 HERC1Q15751 4861 aa7.59□□□□□ -1.19
SF3B3-205ENST00000564899 IGLV4-3A0A075B6K6 122 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 LOC105371267A0A1B0GV96 52 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 H0Y8G0 127 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 NPSP0C0P6 89 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 C3orf79P0CE67 100 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 AKR1D1P51857 326 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 MPV17L2Q567V2 206 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 Q6ZUT4 128 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 WFDC10BQ8IUB3 73 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 BAALCQ8WXS3 180 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 OPRPNQ99935 248 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-205ENST00000564899 MRPS16Q9Y3D3 137 aaKnown RBP7.58□□□□□ -1.2
SF3B3-205ENST00000564899 LINC00588Q9Y4M8 146 aa7.58□□□□□ -1.2
SF3B3-205ENST00000564899 CSDC2Q9Y534 153 aaKnown RBP7.58□□□□□ -1.2
SF3B3-205ENST00000564899 A0A087WX48 190 aa7.57□□□□□ -1.2
SF3B3-205ENST00000564899 SYS1-DBNDD2H3BUS1 97 aa7.57□□□□□ -1.2
SF3B3-205ENST00000564899 PRSS1P07477 247 aa7.57□□□□□ -1.2
SF3B3-205ENST00000564899 RBX1P62877 108 aa7.57□□□□□ -1.2
SF3B3-205ENST00000564899 MRPS36P82909 103 aaKnown RBP7.57□□□□□ -1.2
SF3B3-205ENST00000564899 PAPPA-AS1Q5QFB9 102 aa7.57□□□□□ -1.2
SF3B3-205ENST00000564899 Q8N976 141 aa7.57□□□□□ -1.2
SF3B3-205ENST00000564899 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
SF3B3-205ENST00000564899 IGLV4-60A0A075B6I1 120 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 A0A1B0GUV1 79 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 RNASE13Q5GAN3 156 aaKnown RBP7.56□□□□□ -1.2
SF3B3-205ENST00000564899 ZC2HC1BQ5TFG8 222 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 PET117Q6UWS5 81 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 TEX43Q6ZNM6 134 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 UBE2DNLQ8IWF7 75 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 Q8N3U1 123 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 FAM104AQ969W3 186 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 VCX2Q9H322 139 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 CDC42SE2Q9NRR3 84 aa7.56□□□□□ -1.2
SF3B3-205ENST00000564899 C20orf202A1L168 122 aa7.55□□□□□ -1.2
SF3B3-205ENST00000564899 PMVKQ15126 192 aa7.55□□□□□ -1.2
SF3B3-205ENST00000564899 ZNF664Q8N3J9 261 aa7.55□□□□□ -1.2
SF3B3-205ENST00000564899 C2orf88Q9BSF0 95 aa7.55□□□□□ -1.2
SF3B3-205ENST00000564899 UPK3BQ9BT76 320 aa7.55□□□□□ -1.2
SF3B3-205ENST00000564899 TRAV12-1A0A0B4J245 112 aa7.54□□□□□ -1.2
SF3B3-205ENST00000564899 PRSS29PA6NIE9 313 aa7.54□□□□□ -1.2
SF3B3-205ENST00000564899 IGHV3-30P01768 117 aa7.54□□□□□ -1.2
SF3B3-205ENST00000564899 IGHV3-33P01772 117 aa7.54□□□□□ -1.2
SF3B3-205ENST00000564899 IGHV3-30-3P0DP02 117 aa7.54□□□□□ -1.2
SF3B3-205ENST00000564899 IGHV3-30-5P0DP03 117 aa7.54□□□□□ -1.2
SF3B3-205ENST00000564899 SPATA12Q7Z6I5 190 aa7.54□□□□□ -1.2
SF3B3-205ENST00000564899 AMELXQ99217 191 aa7.54□□□□□ -1.2
SF3B3-205ENST00000564899 CST9LQ9H4G1 147 aa7.54□□□□□ -1.2
SF3B3-205ENST00000564899 SIVA1O15304 175 aa7.53□□□□□ -1.2
SF3B3-205ENST00000564899 SCGB1D1O95968 90 aa7.53□□□□□ -1.2
SF3B3-205ENST00000564899 ANGP03950 147 aaKnown RBP7.53□□□□□ -1.2
SF3B3-205ENST00000564899 DNAH10OSP0CZ25 163 aa7.53□□□□□ -1.2
SF3B3-205ENST00000564899 ODF1Q14990 250 aa7.53□□□□□ -1.2
SF3B3-205ENST00000564899 LINC01556Q5JQF7 62 aa7.53□□□□□ -1.2
SF3B3-205ENST00000564899 LINC01545Q5VT33 79 aa7.53□□□□□ -1.2
SF3B3-205ENST00000564899 LGALS9CQ6DKI2 356 aa7.53□□□□□ -1.2
SF3B3-205ENST00000564899 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
SF3B3-205ENST00000564899 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.21
SF3B3-205ENST00000564899 JOSD1Q15040 202 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-205ENST00000564899 CLPSL2Q6UWE3 100 aa7.52□□□□□ -1.21
SF3B3-205ENST00000564899 LINC00269Q8N2A0 174 aa7.52□□□□□ -1.21
SF3B3-205ENST00000564899 PMCHL2Q9BQD1 86 aa7.52□□□□□ -1.21
SF3B3-205ENST00000564899 MRPL35Q9NZE8 188 aaKnown RBP7.52□□□□□ -1.21
SF3B3-205ENST00000564899 TRAV13-1A0A0B4J241 112 aa7.51□□□□□ -1.21
SF3B3-205ENST00000564899 F8VRH5 84 aa7.51□□□□□ -1.21
SF3B3-205ENST00000564899 UBE2D1P51668 147 aa7.51□□□□□ -1.21
SF3B3-205ENST00000564899 PYY3Q5JQD4 70 aa7.51□□□□□ -1.21
SF3B3-205ENST00000564899 Q9H8V8 135 aa7.51□□□□□ -1.21
SF3B3-205ENST00000564899 KLK12Q9UKR0 248 aa7.51□□□□□ -1.21
SF3B3-205ENST00000564899 DPM2O94777 84 aa7.5□□□□□ -1.21
SF3B3-205ENST00000564899 CRPP02741 224 aa7.5□□□□□ -1.21
SF3B3-205ENST00000564899 REG3AQ06141 175 aa7.5□□□□□ -1.21
SF3B3-205ENST00000564899 IGLV4-69A0A075B6H9 119 aa7.49□□□□□ -1.21
SF3B3-205ENST00000564899 A0A0J9YXV3 536 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms