RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 LINC00308Q8TCZ7 52 aa5.51□□□□□ -1.53
ATXN3-249ENST00000564606 Q9H8V8 135 aa5.51□□□□□ -1.53
ATXN3-249ENST00000564606 XCL2Q9UBD3 114 aa5.51□□□□□ -1.53
ATXN3-249ENST00000564606 CDKN2A-AS1Q9UH64 79 aa5.51□□□□□ -1.53
ATXN3-249ENST00000564606 X6R8D5 127 aa5.51□□□□□ -1.53
ATXN3-249ENST00000564606 CFAP47Q6ZTR5 3102 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.53
ATXN3-249ENST00000564606 SMIM9A6NGZ8 99 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 INSL3P51460 131 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 LINC00242Q5T6M2 205 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 HIST2H2BCQ6DN03 193 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 HIST2H2BDQ6DRA6 164 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 Q6ZSV7 163 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 CITED1Q99966 193 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 CDC42SE2Q9NRR3 84 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 PLA2G2DQ9UNK4 145 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 NBASA2RRP1 2371 aa5.5□□□□□ -1.53
ATXN3-249ENST00000564606 IGHV3OR16-12A0A075B7B8 117 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 IBA57-AS1B1ANH7 110 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 SMIM1B2RUZ4 78 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 H3BQ85 93 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 GAGE5Q13069 117 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 GAGE6Q13070 117 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 DEFB136Q30KP8 78 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 ODF3L2Q3SX64 289 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 ZFHX4Q86UP3 3567 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 ATMQ13315 3056 aa5.49□□□□□ -1.53
ATXN3-249ENST00000564606 MED13LQ71F56 2210 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 HRNRQ86YZ3 2850 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-249ENST00000564606 TRAV13-1A0A0B4J241 112 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 A0A1B0GX51 115 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 DNAJC9-AS1A6NH13 148 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 MT-ATP8P03928 68 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 CXCL5P42830 114 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 XGP55808 180 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 SS18Q15532 418 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 C1orf158Q8N1D5 194 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 COX7B2Q8TF08 81 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 DOPEY1Q5JWR5 2465 aa5.48□□□□□ -1.53
ATXN3-249ENST00000564606 LRBAP50851 2863 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 DMXL2Q8TDJ6 3036 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 IGHV3-38A0A0C4DH36 116 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 A0A1W2PRX2 142 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 GAGE12JA6NER3 117 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 NDUFA7O95182 113 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 RPL28P46779 137 aaKnown RBP5.47□□□□□ -1.53
ATXN3-249ENST00000564606 PROK1P58294 105 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 GAGE4Q13068 117 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 CEMP1Q6PRD7 247 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-249ENST00000564606 DAND5Q8N907 189 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 KIR2DL5BQ8NHK3 375 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 DEFB104AQ8WTQ1 72 aa5.47□□□□□ -1.53
ATXN3-249ENST00000564606 ZNF625Q96I27 306 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-249ENST00000564606 NOP10Q9NPE3 64 aaKnown RBP5.47□□□□□ -1.53
ATXN3-249ENST00000564606 ABCA2Q9BZC7 2435 aa5.46□□□□□ -1.53
ATXN3-249ENST00000564606 TACC2O95359 2948 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 GAGE7O76087 117 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 IGLV1-51P01701 117 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 GAGE12FP0CL80 117 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 GAGE12GP0CL81 117 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 GAGE12IP0CL82 117 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 RNASE13Q5GAN3 156 aaKnown RBP5.46□□□□□ -1.54
ATXN3-249ENST00000564606 Q6ZSN1 163 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 LINC00643Q86TS7 51 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 C15orf53Q8NAA6 179 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 FAM104AQ969W3 186 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 CHCHD5Q9BSY4 110 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 PRRC2AP48634 2157 aaKnown RBP5.46□□□□□ -1.54
ATXN3-249ENST00000564606 AKAP6Q13023 2319 aa5.46□□□□□ -1.54
ATXN3-249ENST00000564606 ATRXP46100 2492 aa5.45□□□□□ -1.54
ATXN3-249ENST00000564606 TRBV6-8A0A0A6YYG3 113 aa5.45□□□□□ -1.54
ATXN3-249ENST00000564606 TEX49A0A1B0GTD5 131 aa5.45□□□□□ -1.54
ATXN3-249ENST00000564606 A0A1B0GUV1 79 aa5.45□□□□□ -1.54
ATXN3-249ENST00000564606 NDUFV3P56181 108 aaKnown RBP5.45□□□□□ -1.54
ATXN3-249ENST00000564606 COX17Q14061 63 aa5.45□□□□□ -1.54
ATXN3-249ENST00000564606 MAPK1IP1LQ8NDC0 245 aa5.45□□□□□ -1.54
ATXN3-249ENST00000564606 NRGNQ92686 78 aa5.45□□□□□ -1.54
ATXN3-249ENST00000564606 SPTAN1Q13813 2472 aaKnown RBP5.45□□□□□ -1.54
ATXN3-249ENST00000564606 A0A087WZ39 114 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 TRBV7-7A0A0K0K1E9 115 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 LYRM9A8MSI8 78 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 BAALC-AS2P0C853 105 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 LINC00158P58513 81 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 C6orf226Q5I0X4 101 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 Q6ZTI0 123 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 C18orf65Q6ZTR6 163 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 ZNF843Q8N446 348 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 SND1-IT1Q9HBX3 110 aa5.44□□□□□ -1.54
ATXN3-249ENST00000564606 BSNQ9UPA5 3926 aa5.43□□□□□ -1.54
ATXN3-249ENST00000564606 F5H768 121 aa5.43□□□□□ -1.54
ATXN3-249ENST00000564606 NPC2P61916 151 aa5.43□□□□□ -1.54
ATXN3-249ENST00000564606 CFAP161Q6P656 301 aa5.43□□□□□ -1.54
ATXN3-249ENST00000564606 Q8IZM0 81 aa5.43□□□□□ -1.54
ATXN3-249ENST00000564606 CLEC2BQ92478 149 aa5.43□□□□□ -1.54
ATXN3-249ENST00000564606 TMEM126AQ9H061 195 aa5.43□□□□□ -1.54
ATXN3-249ENST00000564606 PRO0255Q9UI72 69 aa5.43□□□□□ -1.54
ATXN3-249ENST00000564606 SPENQ96T58 3664 aaKnown RBP5.43□□□□□ -1.54
ATXN3-249ENST00000564606 JMJD7-PLA2G4BH0Y9G9 81 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms