RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 LRCOL1A6NCL2 159 aa11.1□□□□□ -0.63
RNF40-206ENST00000564260 NPSP0C0P6 89 aa11.1□□□□□ -0.63
RNF40-206ENST00000564260 FABP9Q0Z7S8 132 aa11.1□□□□□ -0.63
RNF40-206ENST00000564260 DEFB104AQ8WTQ1 72 aa11.1□□□□□ -0.63
RNF40-206ENST00000564260 NTN5Q8WTR8 489 aaPredicted RBP11.1□□□□□ -0.63
RNF40-206ENST00000564260 ALKBH7Q9BT30 221 aaPredicted RBP11.1□□□□□ -0.63
RNF40-206ENST00000564260 CDC42SE2Q9NRR3 84 aa11.1□□□□□ -0.63
RNF40-206ENST00000564260 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
RNF40-206ENST00000564260 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
RNF40-206ENST00000564260 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
RNF40-206ENST00000564260 PYGO1Q9Y3Y4 419 aa11.09□□□□□ -0.63
RNF40-206ENST00000564260 TRAPPC1Q9Y5R8 145 aa11.09□□□□□ -0.63
RNF40-206ENST00000564260 EPPK1P58107 5090 aaKnown RBP11.09□□□□□ -0.63
RNF40-206ENST00000564260 MRPS36P82909 103 aaKnown RBP11.08□□□□□ -0.64
RNF40-206ENST00000564260 LOC389332A0A1B0GUA5 103 aa11.07□□□□□ -0.64
RNF40-206ENST00000564260 LINC01546A6NGU7 62 aa11.07□□□□□ -0.64
RNF40-206ENST00000564260 KIAA1644Q3SXP7 199 aa11.07□□□□□ -0.64
RNF40-206ENST00000564260 IFI27P40305 119 aaPredicted RBP11.06□□□□□ -0.64
RNF40-206ENST00000564260 Q8N814 137 aa11.06□□□□□ -0.64
RNF40-206ENST00000564260 PRSS3P2Q8NHM4 247 aa11.06□□□□□ -0.64
RNF40-206ENST00000564260 CYSLTR1Q9Y271 337 aa11.06□□□□□ -0.64
RNF40-206ENST00000564260 KRTAP26-1Q6PEX3 210 aa11.05□□□□□ -0.64
RNF40-206ENST00000564260 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
RNF40-206ENST00000564260 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
RNF40-206ENST00000564260 PKHD1P08F94 4074 aa11.04□□□□□ -0.64
RNF40-206ENST00000564260 DNAH11Q96DT5 4516 aa11.04□□□□□ -0.64
RNF40-206ENST00000564260 SS18Q15532 418 aa11.04□□□□□ -0.64
RNF40-206ENST00000564260 SPATA12Q7Z6I5 190 aa11.04□□□□□ -0.64
RNF40-206ENST00000564260 MAPKAPK5-AS1Q8N8E1 139 aa11.04□□□□□ -0.64
RNF40-206ENST00000564260 C1orf196B1AJZ1 125 aa11.03□□□□□ -0.64
RNF40-206ENST00000564260 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
RNF40-206ENST00000564260 LINC00959A0A1B0GUT2 108 aa11.02□□□□□ -0.65
RNF40-206ENST00000564260 RAB5BP61020 215 aa11.02□□□□□ -0.65
RNF40-206ENST00000564260 RPL39P62891 51 aaKnown RBP11.02□□□□□ -0.65
RNF40-206ENST00000564260 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
RNF40-206ENST00000564260 C2orf66Q6UXQ4 117 aa11.02□□□□□ -0.65
RNF40-206ENST00000564260 C16orf90A8MZG2 172 aa11.01□□□□□ -0.65
RNF40-206ENST00000564260 FA2HQ7L5A8 372 aa11.01□□□□□ -0.65
RNF40-206ENST00000564260 CHCHD10Q8WYQ3 142 aaPredicted RBP11.01□□□□□ -0.65
RNF40-206ENST00000564260 TIMM17AQ99595 171 aa11.01□□□□□ -0.65
RNF40-206ENST00000564260 IGLV10-54A0A075B6I4 117 aa11□□□□□ -0.65
RNF40-206ENST00000564260 CD164L2Q6UWJ8 174 aa11□□□□□ -0.65
RNF40-206ENST00000564260 Q6ZN92 141 aa11□□□□□ -0.65
RNF40-206ENST00000564260 C18orf32Q8TCD1 76 aa11□□□□□ -0.65
RNF40-206ENST00000564260 BAALCQ8WXS3 180 aa11□□□□□ -0.65
RNF40-206ENST00000564260 TOMM6Q96B49 74 aa11□□□□□ -0.65
RNF40-206ENST00000564260 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
RNF40-206ENST00000564260 KRTAP10-2P60368 255 aa10.99□□□□□ -0.65
RNF40-206ENST00000564260 Q6ZUT4 128 aa10.99□□□□□ -0.65
RNF40-206ENST00000564260 TMEM141Q96I45 108 aa10.99□□□□□ -0.65
RNF40-206ENST00000564260 IGLV4-3A0A075B6K6 122 aa10.98□□□□□ -0.65
RNF40-206ENST00000564260 IGIPA6NJ69 53 aa10.98□□□□□ -0.65
RNF40-206ENST00000564260 USP17L23D6RBM5 183 aa10.98□□□□□ -0.65
RNF40-206ENST00000564260 LINC00614P0C842 121 aa10.98□□□□□ -0.65
RNF40-206ENST00000564260 IGLV5-52A0A0A0MRZ9 124 aa10.97□□□□□ -0.65
RNF40-206ENST00000564260 IGKV3OR2-268A0A0C4DH90 116 aa10.97□□□□□ -0.65
RNF40-206ENST00000564260 GAGE12HA6NDE8 117 aa10.97□□□□□ -0.65
RNF40-206ENST00000564260 COLCA2A8K830 154 aa10.97□□□□□ -0.65
RNF40-206ENST00000564260 TEX43Q6ZNM6 134 aa10.97□□□□□ -0.65
RNF40-206ENST00000564260 ERASQ7Z444 233 aa10.97□□□□□ -0.65
RNF40-206ENST00000564260 C2orf88Q9BSF0 95 aa10.97□□□□□ -0.65
RNF40-206ENST00000564260 S100A1P23297 94 aa10.96□□□□□ -0.65
RNF40-206ENST00000564260 FOXI1Q12951 378 aa10.96□□□□□ -0.65
RNF40-206ENST00000564260 WFDC2Q14508 124 aa10.96□□□□□ -0.65
RNF40-206ENST00000564260 FAM104AQ969W3 186 aa10.96□□□□□ -0.65
RNF40-206ENST00000564260 BIRC6Q9NR09 4857 aa10.96□□□□□ -0.66
RNF40-206ENST00000564260 IFITM10A6NMD0 228 aa10.95□□□□□ -0.66
RNF40-206ENST00000564260 XCL1P47992 114 aa10.95□□□□□ -0.66
RNF40-206ENST00000564260 CHCHD1Q96BP2 118 aaKnown RBP10.95□□□□□ -0.66
RNF40-206ENST00000564260 AMELXQ99217 191 aa10.95□□□□□ -0.66
RNF40-206ENST00000564260 VCX2Q9H322 139 aa10.95□□□□□ -0.66
RNF40-206ENST00000564260 DYNC1H1Q14204 4646 aaKnown RBP10.94□□□□□ -0.66
RNF40-206ENST00000564260 TRAV13-1A0A0B4J241 112 aa10.94□□□□□ -0.66
RNF40-206ENST00000564260 LECT2O14960 151 aa10.94□□□□□ -0.66
RNF40-206ENST00000564260 GCSHP23434 173 aa10.94□□□□□ -0.66
RNF40-206ENST00000564260 SEC11AP67812 179 aa10.94□□□□□ -0.66
RNF40-206ENST00000564260 IGHV1-58A0A0C4DH39 117 aa10.93□□□□□ -0.66
RNF40-206ENST00000564260 TRGC2P03986 189 aa10.93□□□□□ -0.66
RNF40-206ENST00000564260 CNBPP62633 177 aaKnown RBP10.93□□□□□ -0.66
RNF40-206ENST00000564260 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
RNF40-206ENST00000564260 SCGB3A1Q96QR1 104 aa10.93□□□□□ -0.66
RNF40-206ENST00000564260 GVQW2A0A096LPI5 108 aaPredicted RBP10.92□□□□□ -0.66
RNF40-206ENST00000564260 COX7A2LO14548 114 aa10.92□□□□□ -0.66
RNF40-206ENST00000564260 CDK2AP2O75956 126 aa10.92□□□□□ -0.66
RNF40-206ENST00000564260 HBDP02042 147 aa10.92□□□□□ -0.66
RNF40-206ENST00000564260 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.91□□□□□ -0.66
RNF40-206ENST00000564260 APOMO95445 188 aa10.91□□□□□ -0.66
RNF40-206ENST00000564260 PRSS1P07477 247 aa10.91□□□□□ -0.66
RNF40-206ENST00000564260 RNASE13Q5GAN3 156 aaKnown RBP10.91□□□□□ -0.66
RNF40-206ENST00000564260 LINC01561Q8N1V8 128 aa10.91□□□□□ -0.66
RNF40-206ENST00000564260 OPRPNQ99935 248 aaPredicted RBP10.91□□□□□ -0.66
RNF40-206ENST00000564260 DNAH5Q8TE73 4624 aa10.9□□□□□ -0.66
RNF40-206ENST00000564260 IGHV3OR16-9A0A0B4J2B5 98 aa10.9□□□□□ -0.66
RNF40-206ENST00000564260 hDV102S1A0JD36 115 aa10.9□□□□□ -0.66
RNF40-206ENST00000564260 UBE2D1P51668 147 aa10.9□□□□□ -0.66
RNF40-206ENST00000564260 C15orf56Q8N910 161 aa10.9□□□□□ -0.66
RNF40-206ENST00000564260 URB1-AS1Q96HZ7 61 aa10.9□□□□□ -0.66
RNF40-206ENST00000564260 LRP1BQ9NZR2 4599 aa10.89□□□□□ -0.67
RNF40-206ENST00000564260 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.89□□□□□ -0.67
RNF40-206ENST00000564260 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms