RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 FGF6P10767 208 aa12.77□□□□□ -0.37
SYNGR3-203ENST00000563869 PAPPA-AS1Q5QFB9 102 aa12.77□□□□□ -0.37
SYNGR3-203ENST00000563869 RNASEKQ6P5S7 137 aaKnown RBP12.77□□□□□ -0.37
SYNGR3-203ENST00000563869 TRAV8-4A0A0B4J246 113 aa12.76□□□□□ -0.37
SYNGR3-203ENST00000563869 CCL25O15444 150 aa12.76□□□□□ -0.37
SYNGR3-203ENST00000563869 IFI27P40305 119 aaPredicted RBP12.76□□□□□ -0.37
SYNGR3-203ENST00000563869 AP5S1Q9NUS5 200 aa12.76□□□□□ -0.37
SYNGR3-203ENST00000563869 CYSLTR1Q9Y271 337 aa12.76□□□□□ -0.37
SYNGR3-203ENST00000563869 LINC01546A6NGU7 62 aa12.75□□□□□ -0.37
SYNGR3-203ENST00000563869 KLK12Q9UKR0 248 aa12.75□□□□□ -0.37
SYNGR3-203ENST00000563869 PYGO1Q9Y3Y4 419 aa12.75□□□□□ -0.37
SYNGR3-203ENST00000563869 CDK2AP2O75956 126 aa12.74□□□□□ -0.37
SYNGR3-203ENST00000563869 C18orf32Q8TCD1 76 aa12.74□□□□□ -0.37
SYNGR3-203ENST00000563869 PRR34Q9NV39 138 aa12.74□□□□□ -0.37
SYNGR3-203ENST00000563869 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.73□□□□□ -0.37
SYNGR3-203ENST00000563869 IGKV2-29A2NJV5 120 aaPredicted RBP12.73□□□□□ -0.37
SYNGR3-203ENST00000563869 TRGC2P03986 189 aa12.73□□□□□ -0.37
SYNGR3-203ENST00000563869 LINC00614P0C842 121 aa12.73□□□□□ -0.37
SYNGR3-203ENST00000563869 CHCHD1Q96BP2 118 aaKnown RBP12.73□□□□□ -0.37
SYNGR3-203ENST00000563869 LRP1BQ9NZR2 4599 aa12.73□□□□□ -0.37
SYNGR3-203ENST00000563869 REG3AQ06141 175 aa12.72□□□□□ -0.37
SYNGR3-203ENST00000563869 MAPKAPK5-AS1Q8N8E1 139 aa12.72□□□□□ -0.37
SYNGR3-203ENST00000563869 Q8N976 141 aa12.72□□□□□ -0.37
SYNGR3-203ENST00000563869 C1orf43Q9BWL3 253 aa12.72□□□□□ -0.37
SYNGR3-203ENST00000563869 UBE2D4Q9Y2X8 147 aa12.72□□□□□ -0.37
SYNGR3-203ENST00000563869 PSCAO43653 123 aa12.71□□□□□ -0.37
SYNGR3-203ENST00000563869 MRPS36P82909 103 aaKnown RBP12.71□□□□□ -0.37
SYNGR3-203ENST00000563869 Q6ZN92 141 aa12.71□□□□□ -0.37
SYNGR3-203ENST00000563869 ZNF664Q8N3J9 261 aa12.71□□□□□ -0.37
SYNGR3-203ENST00000563869 UBE2WQ96B02 151 aa12.71□□□□□ -0.37
SYNGR3-203ENST00000563869 C16orf90A8MZG2 172 aa12.7□□□□□ -0.38
SYNGR3-203ENST00000563869 SCO1O75880 301 aa12.7□□□□□ -0.38
SYNGR3-203ENST00000563869 C2orf66Q6UXQ4 117 aa12.7□□□□□ -0.38
SYNGR3-203ENST00000563869 LINC00269Q8N2A0 174 aa12.7□□□□□ -0.38
SYNGR3-203ENST00000563869 KRTAP1-5Q9BYS1 174 aa12.7□□□□□ -0.38
SYNGR3-203ENST00000563869 EREGO14944 169 aa12.69□□□□□ -0.38
SYNGR3-203ENST00000563869 BAGE3Q86Y29 109 aa12.69□□□□□ -0.38
SYNGR3-203ENST00000563869 DEFB104AQ8WTQ1 72 aa12.69□□□□□ -0.38
SYNGR3-203ENST00000563869 CDC42SE2Q9NRR3 84 aa12.69□□□□□ -0.38
SYNGR3-203ENST00000563869 TOMM6Q96B49 74 aa12.68□□□□□ -0.38
SYNGR3-203ENST00000563869 TMEM141Q96I45 108 aa12.68□□□□□ -0.38
SYNGR3-203ENST00000563869 TIMM17AQ99595 171 aa12.68□□□□□ -0.38
SYNGR3-203ENST00000563869 IGLV4-60A0A075B6I1 120 aa12.67□□□□□ -0.38
SYNGR3-203ENST00000563869 TNP2Q05952 138 aa12.67□□□□□ -0.38
SYNGR3-203ENST00000563869 SS18Q15532 418 aa12.67□□□□□ -0.38
SYNGR3-203ENST00000563869 C2orf88Q9BSF0 95 aa12.67□□□□□ -0.38
SYNGR3-203ENST00000563869 Q9HAA7 133 aa12.67□□□□□ -0.38
SYNGR3-203ENST00000563869 ERASQ7Z444 233 aa12.66□□□□□ -0.38
SYNGR3-203ENST00000563869 APOBP04114 4563 aaKnown RBP12.66□□□□□ -0.38
SYNGR3-203ENST00000563869 IGKV2D-24A0A075B6R9 120 aa12.65□□□□□ -0.38
SYNGR3-203ENST00000563869 C1orf196B1AJZ1 125 aa12.65□□□□□ -0.38
SYNGR3-203ENST00000563869 HBDP02042 147 aa12.65□□□□□ -0.38
SYNGR3-203ENST00000563869 RPL39P62891 51 aaKnown RBP12.65□□□□□ -0.38
SYNGR3-203ENST00000563869 ENHOQ6UWT2 76 aa12.65□□□□□ -0.38
SYNGR3-203ENST00000563869 Q8N1X5 172 aa12.65□□□□□ -0.38
SYNGR3-203ENST00000563869 Q8N3U1 123 aa12.65□□□□□ -0.38
SYNGR3-203ENST00000563869 HSBP1O75506 76 aa12.64□□□□□ -0.39
SYNGR3-203ENST00000563869 TEX43Q6ZNM6 134 aa12.64□□□□□ -0.39
SYNGR3-203ENST00000563869 SCGB3A1Q96QR1 104 aa12.64□□□□□ -0.39
SYNGR3-203ENST00000563869 ATP5LO75964 103 aa12.63□□□□□ -0.39
SYNGR3-203ENST00000563869 SEC11AP67812 179 aa12.63□□□□□ -0.39
SYNGR3-203ENST00000563869 C14orf177Q52M58 125 aa12.63□□□□□ -0.39
SYNGR3-203ENST00000563869 VCX2Q9H322 139 aa12.63□□□□□ -0.39
SYNGR3-203ENST00000563869 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.62□□□□□ -0.39
SYNGR3-203ENST00000563869 Q6ZRN7 208 aaPredicted RBP12.62□□□□□ -0.39
SYNGR3-203ENST00000563869 IGIPA6NJ69 53 aa12.61□□□□□ -0.39
SYNGR3-203ENST00000563869 DNAH5Q8TE73 4624 aa12.61□□□□□ -0.39
SYNGR3-203ENST00000563869 LINC00959A0A1B0GUT2 108 aa12.6□□□□□ -0.39
SYNGR3-203ENST00000563869 CFAP161Q6P656 301 aa12.6□□□□□ -0.39
SYNGR3-203ENST00000563869 IGLV4-3A0A075B6K6 122 aa12.59□□□□□ -0.39
SYNGR3-203ENST00000563869 IFITM10A6NMD0 228 aa12.59□□□□□ -0.39
SYNGR3-203ENST00000563869 CLPSL2Q6UWE3 100 aa12.59□□□□□ -0.39
SYNGR3-203ENST00000563869 Q6ZUT4 128 aa12.59□□□□□ -0.39
SYNGR3-203ENST00000563869 CD164L2Q6UWJ8 174 aa12.58□□□□□ -0.4
SYNGR3-203ENST00000563869 HERC1Q15751 4861 aa12.58□□□□□ -0.4
SYNGR3-203ENST00000563869 IGKV3OR2-268A0A0C4DH90 116 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST1H2BKO60814 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST1H2BJP06899 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST1H2BOP23527 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST1H2BBP33778 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST1H2BDP58876 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST1H2BCP62807 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST2H2BEQ16778 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 CHCHD10Q8WYQ3 142 aaPredicted RBP12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST1H2BHQ93079 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 AMELXQ99217 191 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST1H2BNQ99877 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 HIST1H2BMQ99879 126 aa12.57□□□□□ -0.4
SYNGR3-203ENST00000563869 URB1-AS1Q96HZ7 61 aa12.56□□□□□ -0.4
SYNGR3-203ENST00000563869 PACRGQ96M98 296 aaPredicted RBP12.56□□□□□ -0.4
SYNGR3-203ENST00000563869 TRAV13-1A0A0B4J241 112 aa12.55□□□□□ -0.4
SYNGR3-203ENST00000563869 SERF1AO75920 110 aa12.55□□□□□ -0.4
SYNGR3-203ENST00000563869 HSPB8Q9UJY1 196 aa12.55□□□□□ -0.4
SYNGR3-203ENST00000563869 IGLV10-54A0A075B6I4 117 aa12.54□□□□□ -0.4
SYNGR3-203ENST00000563869 APOMO95445 188 aa12.54□□□□□ -0.4
SYNGR3-203ENST00000563869 PMVKQ15126 192 aa12.54□□□□□ -0.4
SYNGR3-203ENST00000563869 PDZD11Q5EBL8 140 aa12.54□□□□□ -0.4
SYNGR3-203ENST00000563869 CDPF1Q6NVV7 123 aa12.54□□□□□ -0.4
SYNGR3-203ENST00000563869 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms