RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
CDR2-203ENST00000563573 SMAGPQ0VAQ4 97 aa3.22□□□□□ -1.89
CDR2-203ENST00000563573 GAGE5Q13069 117 aa3.22□□□□□ -1.89
CDR2-203ENST00000563573 COTL1Q14019 142 aa3.22□□□□□ -1.89
CDR2-203ENST00000563573 MRPL23Q16540 153 aaKnown RBP3.22□□□□□ -1.89
CDR2-203ENST00000563573 IQCJQ1A5X6 159 aa3.22□□□□□ -1.89
CDR2-203ENST00000563573 COA6Q5JTJ3 125 aaKnown RBP3.22□□□□□ -1.89
CDR2-203ENST00000563573 TMEM70Q9BUB7 260 aa3.22□□□□□ -1.89
CDR2-203ENST00000563573 SMIM2Q9BVW6 85 aa3.22□□□□□ -1.89
CDR2-203ENST00000563573 PLECQ15149 4684 aaKnown RBP3.21□□□□□ -1.9
CDR2-203ENST00000563573 TRAV26-1A0A087WT03 109 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 A0A0J9YY99 117 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 C5orf52A6NGY3 159 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 H3BNG1 76 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 SERF1AO75920 110 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 P0DMU3 169 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 FAM231AP0DMU4 169 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 FAM231CP0DMU5 169 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 ESDP10768 282 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 UBE2D3P61077 147 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 UBE2D2P62837 147 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 ATP6V0E2Q8NHE4 81 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 PHLDA1Q8WV24 401 aaPredicted RBP3.21□□□□□ -1.9
CDR2-203ENST00000563573 GTSF1LQ9H1H1 148 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 ICOSQ9Y6W8 199 aa3.21□□□□□ -1.9
CDR2-203ENST00000563573 IGLV2-18A0A075B6J9 118 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 TRBV25-1A0A075B6N4 114 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 IGHV3-38A0A0C4DH36 116 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 LOC100131303A0A0U1RQF7 123 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 LINC01546A6NGU7 62 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 UBE2L6O14933 153 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 LEPROTL1O95214 131 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 HBDP02042 147 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 PDZD11Q5EBL8 140 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 NEGR1Q7Z3B1 354 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 HIST3H2BBQ8N257 126 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 FAM19A2Q8N3H0 131 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 C15orf53Q8NAA6 179 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 TMEM101Q96IK0 257 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 VSIG2Q96IQ7 327 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 HSPB8Q9UJY1 196 aa3.2□□□□□ -1.9
CDR2-203ENST00000563573 KLK5Q9Y337 293 aaPredicted RBP3.2□□□□□ -1.9
CDR2-203ENST00000563573 KMT2CQ8NEZ4 4911 aaKnown RBP3.2□□□□□ -1.9
CDR2-203ENST00000563573 RYR3Q15413 4870 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 A0A096LPF7 62 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 IGHV1-24A0A0C4DH33 117 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 IGLL5B9A064 214 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 TMEM262E9PQX1 116 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.19□□□□□ -1.9
CDR2-203ENST00000563573 H7C423 109 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 NUPR1O60356 82 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 ATP5LO75964 103 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 TSHBP01222 138 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 CFC1BP0CG36 223 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 CFC1P0CG37 223 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 FABP4P15090 132 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 PKIAP61925 76 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 C2orf66Q6UXQ4 117 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 Q6ZN92 141 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 C20orf203Q8NBC4 194 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 PACRGQ96M98 296 aaPredicted RBP3.19□□□□□ -1.9
CDR2-203ENST00000563573 SCGB3A1Q96QR1 104 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 MAP1LC3CQ9BXW4 147 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 Q9UF83 564 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 CYSLTR1Q9Y271 337 aa3.19□□□□□ -1.9
CDR2-203ENST00000563573 TRBV6-8A0A0A6YYG3 113 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 TRAV8-6A0A0B4J262 113 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 NUPR2A6NF83 97 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 PRSS1P07477 247 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 AKR1D1P51857 326 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 CCL18P55774 89 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 TCTAP57738 103 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 PMCHL1Q16048 86 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 AMMECR1LQ6DCA0 310 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 CEMP1Q6PRD7 247 aaPredicted RBP3.18□□□□□ -1.9
CDR2-203ENST00000563573 LYPD5Q6UWN5 251 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 ERASQ7Z444 233 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 NFE4Q86UQ8 179 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 DEFB104AQ8WTQ1 72 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 TOMM6Q96B49 74 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 TMEM141Q96I45 108 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 CHCHD5Q9BSY4 110 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 TMEM243Q9BU79 118 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 TENM2Q9NT68 2774 aa3.18□□□□□ -1.9
CDR2-203ENST00000563573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.17□□□□□ -1.9
CDR2-203ENST00000563573 A0A087WX48 190 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 IGKV2-29A2NJV5 120 aaPredicted RBP3.17□□□□□ -1.9
CDR2-203ENST00000563573 ZNF25P17030 456 aaPredicted RBP3.17□□□□□ -1.9
CDR2-203ENST00000563573 RPL39P62891 51 aaKnown RBP3.17□□□□□ -1.9
CDR2-203ENST00000563573 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 LELP1Q5T871 98 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 NTM-AS1Q6ZSK4 140 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 Q75L30 129 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 OR10D4PQ8NGN7 298 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 IFI27L1Q96BM0 104 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 HIST1H2BLQ99880 126 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms