RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 LINC00467Q9BRT7 94 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 IGHV4-28A0A0C4DH34 117 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 A0A1B0GW54 56 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 C16orf74Q96GX8 76 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 UBE2E2Q96LR5 201 aa4.64□□□□□ -1.67
CLK3-212ENST00000563418 TRBV6-4A0A1B0GX49 114 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 ETDCA0A1B0GVM5 59 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 LINC01561Q8N1V8 128 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 CACNA1BQ00975 2339 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 G3V318 75 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 DAZAP2Q15038 168 aaPredicted RBP4.63□□□□□ -1.67
CLK3-212ENST00000563418 FSTL3O95633 263 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 ADAMTSL4-AS1Q5T5F5 129 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 Q6ZVQ6 151 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 DKK4Q9UBT3 224 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 SORL1Q92673 2214 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 CLPSL1A2RUU4 121 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 CACNA1GO43497 2377 aa4.63□□□□□ -1.67
CLK3-212ENST00000563418 FAM19A1Q7Z5A9 133 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 DEFB124Q8NES8 71 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 A0A087WYN8 130 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 LINC00269Q8N2A0 174 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 A0A087WZ39 114 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 DSCAMO60469 2012 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 GAS8-AS1O95177 125 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 ATP11AUNQ6ZP68 121 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 SCXQ7RTU7 201 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 CCL19Q99731 98 aa4.62□□□□□ -1.67
CLK3-212ENST00000563418 ANGP03950 147 aaKnown RBP4.62□□□□□ -1.67
CLK3-212ENST00000563418 MUC22E2RYF6 1773 aaPredicted RBP4.61□□□□□ -1.67
CLK3-212ENST00000563418 TNFRSF13BO14836 293 aaPredicted RBP4.61□□□□□ -1.67
CLK3-212ENST00000563418 LINC00208Q96KT6 92 aa4.61□□□□□ -1.67
CLK3-212ENST00000563418 PRSS33Q8NF86 280 aa4.61□□□□□ -1.67
CLK3-212ENST00000563418 H3BUX3 64 aa4.61□□□□□ -1.67
CLK3-212ENST00000563418 RNASE3P12724 160 aaKnown RBP4.61□□□□□ -1.67
CLK3-212ENST00000563418 C6orf99Q4VX62 202 aa4.61□□□□□ -1.67
CLK3-212ENST00000563418 KLLNB2CW77 178 aa4.61□□□□□ -1.67
CLK3-212ENST00000563418 DEFB112Q30KQ8 113 aa4.61□□□□□ -1.67
CLK3-212ENST00000563418 C7orf65Q6ZTY9 151 aa4.61□□□□□ -1.67
CLK3-212ENST00000563418 LOC110117498A0A087WWA1 95 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 C4orf48Q5BLP8 95 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 GPHB5Q86YW7 130 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 DEFB105AQ8NG35 78 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 OXLD1Q5BKU9 147 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 LINC00482Q8N8I6 264 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 APOC4P55056 127 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 PCNX1Q96RV3 2341 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 HILS1P60008 231 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 C22orf34Q6ZV56 151 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 B9D2Q9BPU9 175 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 PCSK5Q92824 1860 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 IGHV3OR16-10A0A075B7F0 116 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 WISP2O76076 250 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 CTSZQ9UBR2 303 aa4.6□□□□□ -1.67
CLK3-212ENST00000563418 LINC01560Q8TB33 94 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 HIGD2AQ9BW72 106 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 DSCR9P59020 149 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 DHRS4-AS1Q9P1J3 65 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 PRM2P04554 102 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 Q6ZQY7 126 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 SMCR5Q8TEV8 140 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 SMAD5-AS1Q9Y6J3 95 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 MRGPRG-AS1Q2M3A8 158 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 COL6A6A6NMZ7 2263 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 LYNX1G3V0Z9 82 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 LYNX1P0DP58 116 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 CCL18P55774 89 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 H3BPC8 53 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 Q8N9L7 120 aa4.59□□□□□ -1.67
CLK3-212ENST00000563418 PATE3B3GLJ2 98 aa4.59□□□□□ -1.68
CLK3-212ENST00000563418 IL17DQ8TAD2 202 aa4.59□□□□□ -1.68
CLK3-212ENST00000563418 C11orf21Q9P2W6 132 aa4.59□□□□□ -1.68
CLK3-212ENST00000563418 SMIM1B2RUZ4 78 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 H7BZZ5 65 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 DEFB130BP0DP73 79 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 DEFB130AP0DP74 79 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 CAMK2N2Q96S95 79 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 WNK1Q9H4A3 2382 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 C8orf87E5RJ46 101 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 ATP1A1-AS1Q5TC04 95 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 Q8IZM0 81 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 FAM30AQ9NZY2 134 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 PTPRQQ9UMZ3 2332 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 C1orf229Q6ZS94 237 aaPredicted RBP4.58□□□□□ -1.68
CLK3-212ENST00000563418 CCDC140Q96MF4 163 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 NOP10Q9NPE3 64 aaKnown RBP4.58□□□□□ -1.68
CLK3-212ENST00000563418 E7EQL1 145 aa4.58□□□□□ -1.68
CLK3-212ENST00000563418 LRCOL1A6NCL2 159 aa4.57□□□□□ -1.68
CLK3-212ENST00000563418 LCA10Q71F78 164 aa4.57□□□□□ -1.68
CLK3-212ENST00000563418 HCG22E2RYF7 251 aa4.57□□□□□ -1.68
CLK3-212ENST00000563418 IGKV4-1P06312 121 aa4.57□□□□□ -1.68
CLK3-212ENST00000563418 Q8N9W7 124 aa4.57□□□□□ -1.68
CLK3-212ENST00000563418 ZNF73O43830 326 aaPredicted RBP4.57□□□□□ -1.68
CLK3-212ENST00000563418 C2orf48Q96LS8 159 aa4.57□□□□□ -1.68
CLK3-212ENST00000563418 C5orf56Q8N8D9 126 aa4.56□□□□□ -1.68
CLK3-212ENST00000563418 TRBV6-8A0A0A6YYG3 113 aa4.56□□□□□ -1.68
CLK3-212ENST00000563418 IGLV5-39A0A0G2JS06 123 aa4.56□□□□□ -1.68
CLK3-212ENST00000563418 C3orf84H3BNL1 204 aa4.56□□□□□ -1.68
CLK3-212ENST00000563418 Q5XG85 94 aa4.56□□□□□ -1.68
CLK3-212ENST00000563418 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms