RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 TCTAP57738 103 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 UBE2D3P61077 147 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 UBE2D2P62837 147 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 NEGR1Q7Z3B1 354 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 SH2D6Q7Z4S9 175 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 UBE2DNLQ8IWF7 75 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 ORMDL3Q8N138 153 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.49□□□□□ -1.85
CNOT1-205ENST00000563283 ATP6V0E2Q8NHE4 81 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 DEFB104AQ8WTQ1 72 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 DNAJC30Q96LL9 226 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 PRELID3AQ96N28 172 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 ST20Q9HBF5 79 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 NIT2Q9NQR4 276 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 TRAPPC1Q9Y5R8 145 aa3.49□□□□□ -1.85
CNOT1-205ENST00000563283 LOC389332A0A1B0GUA5 103 aa3.48□□□□□ -1.85
CNOT1-205ENST00000563283 SDHAF1A6NFY7 115 aa3.48□□□□□ -1.85
CNOT1-205ENST00000563283 COLCA2A8K830 154 aa3.48□□□□□ -1.85
CNOT1-205ENST00000563283 PPP1R17O96001 155 aa3.48□□□□□ -1.85
CNOT1-205ENST00000563283 NPYP01303 97 aa3.48□□□□□ -1.85
CNOT1-205ENST00000563283 CCL18P55774 89 aa3.48□□□□□ -1.85
CNOT1-205ENST00000563283 ESRGQ1W209 222 aa3.48□□□□□ -1.85
CNOT1-205ENST00000563283 Q6ZR54 194 aa3.48□□□□□ -1.85
CNOT1-205ENST00000563283 DAZ4Q86SG3 579 aaKnown RBP3.48□□□□□ -1.85
CNOT1-205ENST00000563283 DAZ3Q9NR90 486 aaKnown RBP3.48□□□□□ -1.85
CNOT1-205ENST00000563283 HERC2O95714 4834 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 KIAA1109Q2LD37 5005 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 TRBV6-5A0A0K0K1A5 114 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 VCYO14598 125 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 PHOX2AO14813 284 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 TRGC2P03986 189 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 PMCHP20382 165 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 FCER1GP30273 86 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 GAGE6Q13070 117 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 COTL1Q14019 142 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 LYPD5Q6UWN5 251 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 C20orf78Q9BR46 151 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 ALKBH7Q9BT30 221 aaPredicted RBP3.47□□□□□ -1.85
CNOT1-205ENST00000563283 TMEM70Q9BUB7 260 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 SMIM2Q9BVW6 85 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 GTSF1LQ9H1H1 148 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 MAP1LC3AQ9H492 121 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 LAMTOR2Q9Y2Q5 125 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 LINC00588Q9Y4M8 146 aa3.47□□□□□ -1.85
CNOT1-205ENST00000563283 DNAH5Q8TE73 4624 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 TRBV6-8A0A0A6YYG3 113 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 TRAV8-6A0A0B4J262 113 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 IGHV1-24A0A0C4DH33 117 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 TRBV27A0A0K0K1C4 114 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 I3L3M4 83 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 M0R2N4 97 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 RTL8CO15255 209 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 TSHBP01222 138 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 POLR2KP53803 58 aaKnown RBP3.46□□□□□ -1.86
CNOT1-205ENST00000563283 IQCJQ1A5X6 159 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 C14orf177Q52M58 125 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 LELP1Q5T871 98 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 NTM-AS1Q6ZSK4 140 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 WFDC10BQ8IUB3 73 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 KIR2DL4Q99706 377 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 CHCHD5Q9BSY4 110 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 TMEM243Q9BU79 118 aa3.46□□□□□ -1.86
CNOT1-205ENST00000563283 MRPS16Q9Y3D3 137 aaKnown RBP3.46□□□□□ -1.86
CNOT1-205ENST00000563283 IGLV2-18A0A075B6J9 118 aa3.45□□□□□ -1.86
CNOT1-205ENST00000563283 TRBV25-1A0A075B6N4 114 aa3.45□□□□□ -1.86
CNOT1-205ENST00000563283 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.45□□□□□ -1.86
CNOT1-205ENST00000563283 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
CNOT1-205ENST00000563283 IGKV2-29A2NJV5 120 aaPredicted RBP3.45□□□□□ -1.86
CNOT1-205ENST00000563283 UBE2L6O14933 153 aa3.45□□□□□ -1.86
CNOT1-205ENST00000563283 TCAPO15273 167 aa3.45□□□□□ -1.86
CNOT1-205ENST00000563283 IFI27P40305 119 aaPredicted RBP3.45□□□□□ -1.86
CNOT1-205ENST00000563283 RPL32P62910 135 aaKnown RBP3.45□□□□□ -1.86
CNOT1-205ENST00000563283 TMEM97Q5BJF2 176 aa3.45□□□□□ -1.86
CNOT1-205ENST00000563283 FA2HQ7L5A8 372 aa3.45□□□□□ -1.86
CNOT1-205ENST00000563283 C18orf32Q8TCD1 76 aa3.45□□□□□ -1.86
CNOT1-205ENST00000563283 LITAFQ99732 161 aa3.45□□□□□ -1.86
CNOT1-205ENST00000563283 NXT2Q9NPJ8 142 aaKnown RBP3.45□□□□□ -1.86
CNOT1-205ENST00000563283 A0A087WX48 190 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 C1orf196B1AJZ1 125 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 USP17L23D6RBM5 183 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 TMEM262E9PQX1 116 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 SIVA1O15304 175 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 IGHV3-30P01768 117 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 IGHV3-33P01772 117 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 IGHV3-30-3P0DP02 117 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 IGHV3-30-5P0DP03 117 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 AMMECR1LQ6DCA0 310 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 RNASEKQ6P5S7 137 aaKnown RBP3.44□□□□□ -1.86
CNOT1-205ENST00000563283 BAGE3Q86Y29 109 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 KRTAP7-1Q8IUC3 87 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 Q8N8P6 123 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 UPK3BQ9BT76 320 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 RYR1P21817 5038 aa3.44□□□□□ -1.86
CNOT1-205ENST00000563283 APOBP04114 4563 aaKnown RBP3.43□□□□□ -1.86
CNOT1-205ENST00000563283 LRP1BQ9NZR2 4599 aa3.43□□□□□ -1.86
CNOT1-205ENST00000563283 DNAH10OSP0CZ25 163 aa3.43□□□□□ -1.86
CNOT1-205ENST00000563283 FGF6P10767 208 aa3.43□□□□□ -1.86
CNOT1-205ENST00000563283 ESDP10768 282 aa3.43□□□□□ -1.86
CNOT1-205ENST00000563283 PKIAP61925 76 aa3.43□□□□□ -1.86
CNOT1-205ENST00000563283 RPL24P83731 157 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms