RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 RAB4BP61018 213 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 UBE2D3P61077 147 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 SSTP61278 116 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 UBE2D2P62837 147 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 RHOHQ15669 191 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 MRPL23Q16540 153 aaKnown RBP3.03□□□□□ -1.92
SMG1-206ENST00000562668 FAM74A4Q5TZK3 123 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 SPANXN1Q5VSR9 72 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 C15orf54Q8N8G6 183 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 RNF185Q96GF1 192 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 PGLYRP4Q96LB8 373 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 TPPP3Q9BW30 176 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 MRPS16Q9Y3D3 137 aaKnown RBP3.03□□□□□ -1.92
SMG1-206ENST00000562668 ICOSQ9Y6W8 199 aa3.03□□□□□ -1.92
SMG1-206ENST00000562668 TRBV10-1A0A0K0K1A3 114 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 A0A1B0GUT8 65 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 F8W036 122 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 REG3GQ6UW15 175 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 NTM-AS1Q6ZSK4 140 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 NEGR1Q7Z3B1 354 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 AP1S3Q96PC3 154 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 TMEM191AQ9H0A3 160 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 DPH3P1Q9H4G8 78 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 NAT8BQ9UHF3 227 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 KIAA1109Q2LD37 5005 aa3.02□□□□□ -1.93
SMG1-206ENST00000562668 TRBV7-3A0A075B6L6 115 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 TRAV26-2A0A0B4J265 109 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 C7orf77A4D0Y5 90 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 PPP1R2P9O14990 202 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 TRGC1P0CF51 173 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 RAB4AP20338 218 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 SRIP30626 198 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 RPS10P46783 165 aaKnown RBP3.01□□□□□ -1.93
SMG1-206ENST00000562668 CCL18P55774 89 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 ZNF56Q15929 161 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 WFDC10BQ8IUB3 73 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 SLC7A5P1Q8MH63 180 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 ATP6V0E2Q8NHE4 81 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 RPL39LQ96EH5 51 aaKnown RBP3.01□□□□□ -1.93
SMG1-206ENST00000562668 YPEL4Q96NS1 127 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 PRADC1Q9BSG0 188 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 GTSF1LQ9H1H1 148 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 TMEM242Q9NWH2 141 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 HERC2O95714 4834 aa3.01□□□□□ -1.93
SMG1-206ENST00000562668 PKHD1P08F94 4074 aa3□□□□□ -1.93
SMG1-206ENST00000562668 IGLV2-18A0A075B6J9 118 aa3□□□□□ -1.93
SMG1-206ENST00000562668 A0A087WWC5 75 aa3□□□□□ -1.93
SMG1-206ENST00000562668 TRBV6-5A0A0K0K1A5 114 aa3□□□□□ -1.93
SMG1-206ENST00000562668 NBDYA0A0U1RRE5 68 aa3□□□□□ -1.93
SMG1-206ENST00000562668 MT-ND4LP03901 98 aa3□□□□□ -1.93
SMG1-206ENST00000562668 MGPP08493 103 aa3□□□□□ -1.93
SMG1-206ENST00000562668 NDUFV3P56181 108 aaKnown RBP3□□□□□ -1.93
SMG1-206ENST00000562668 MRPL51Q4U2R6 128 aaKnown RBP3□□□□□ -1.93
SMG1-206ENST00000562668 LELP1Q5T871 98 aa3□□□□□ -1.93
SMG1-206ENST00000562668 FAM104BQ5XKR9 115 aa3□□□□□ -1.93
SMG1-206ENST00000562668 MRPL54Q6P161 138 aaKnown RBP3□□□□□ -1.93
SMG1-206ENST00000562668 RASL11AQ6T310 242 aa3□□□□□ -1.93
SMG1-206ENST00000562668 ATRAIDQ6UW56 229 aa3□□□□□ -1.93
SMG1-206ENST00000562668 Q6ZRN7 208 aaPredicted RBP3□□□□□ -1.93
SMG1-206ENST00000562668 ATP5L2Q7Z4Y8 100 aa3□□□□□ -1.93
SMG1-206ENST00000562668 AMN1Q8IY45 258 aa3□□□□□ -1.93
SMG1-206ENST00000562668 FRZBQ92765 325 aa3□□□□□ -1.93
SMG1-206ENST00000562668 DNAJC30Q96LL9 226 aa3□□□□□ -1.93
SMG1-206ENST00000562668 LINC00167Q96N53 147 aa3□□□□□ -1.93
SMG1-206ENST00000562668 IMMP2LQ96T52 175 aa3□□□□□ -1.93
SMG1-206ENST00000562668 NIT2Q9NQR4 276 aa3□□□□□ -1.93
SMG1-206ENST00000562668 TRBV24-1A0A075B6N3 115 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 TRBV6-8A0A0A6YYG3 113 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 A0A1B0GW15 77 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 SMKR1H3BMG3 65 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 SIVA1O15304 175 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 SMIM17P0DL12 118 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 POLR2KP53803 58 aaKnown RBP2.99□□□□□ -1.93
SMG1-206ENST00000562668 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 HBBP68871 147 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 RHEBQ15382 184 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 LINC01556Q5JQF7 62 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 TMEM136Q6ZRR5 245 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 UBE2DNLQ8IWF7 75 aa2.99□□□□□ -1.93
SMG1-206ENST00000562668 TRAV9-1A0A075B6T8 112 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 H7C1H1 209 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 M0R2N4 97 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 NCR2O95944 276 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 APOC3P02656 99 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 ESDP10768 282 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 ELOBQ15370 118 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 IQCJQ1A5X6 159 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 DAZ4Q86SG3 579 aaKnown RBP2.98□□□□□ -1.93
SMG1-206ENST00000562668 NIT1Q86X76 327 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 BORCS7Q96B45 105 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 MRAP2Q96G30 205 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 BTF3L4Q96K17 158 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 TMEM70Q9BUB7 260 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 CHCHD7Q9BUK0 85 aa2.98□□□□□ -1.93
SMG1-206ENST00000562668 DAZ3Q9NR90 486 aaKnown RBP2.98□□□□□ -1.93
SMG1-206ENST00000562668 TRBV27A0A0K0K1C4 114 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 SDHAF1A6NFY7 115 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 IBA57-AS1B1ANH7 110 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 368 ms