RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 SPANXA1Q9NS26 97 aa10.91□□□□□ -0.66
USB1-206ENST00000562534 LINC01546A6NGU7 62 aa10.9□□□□□ -0.66
USB1-206ENST00000562534 RPL39P62891 51 aaKnown RBP10.9□□□□□ -0.66
USB1-206ENST00000562534 CLPSL2Q6UWE3 100 aa10.9□□□□□ -0.66
USB1-206ENST00000562534 FA2HQ7L5A8 372 aa10.89□□□□□ -0.67
USB1-206ENST00000562534 CYSLTR1Q9Y271 337 aa10.89□□□□□ -0.67
USB1-206ENST00000562534 PYGO1Q9Y3Y4 419 aa10.89□□□□□ -0.67
USB1-206ENST00000562534 LINC01549A6NIU2 74 aa10.88□□□□□ -0.67
USB1-206ENST00000562534 RAB5BP61020 215 aa10.88□□□□□ -0.67
USB1-206ENST00000562534 C2orf66Q6UXQ4 117 aa10.88□□□□□ -0.67
USB1-206ENST00000562534 C18orf32Q8TCD1 76 aa10.88□□□□□ -0.67
USB1-206ENST00000562534 A0A087WTM6 91 aa10.87□□□□□ -0.67
USB1-206ENST00000562534 IGKV3OR2-268A0A0C4DH90 116 aa10.87□□□□□ -0.67
USB1-206ENST00000562534 CCL25O15444 150 aa10.87□□□□□ -0.67
USB1-206ENST00000562534 SCO1O75880 301 aa10.87□□□□□ -0.67
USB1-206ENST00000562534 TRGC2P03986 189 aa10.87□□□□□ -0.67
USB1-206ENST00000562534 LINC00614P0C842 121 aa10.87□□□□□ -0.67
USB1-206ENST00000562534 MRPS36P82909 103 aaKnown RBP10.87□□□□□ -0.67
USB1-206ENST00000562534 IGLV10-54A0A075B6I4 117 aa10.86□□□□□ -0.67
USB1-206ENST00000562534 A0A1B0GVY2 172 aa10.86□□□□□ -0.67
USB1-206ENST00000562534 LRCOL1A6NCL2 159 aa10.86□□□□□ -0.67
USB1-206ENST00000562534 SS18Q15532 418 aa10.86□□□□□ -0.67
USB1-206ENST00000562534 MAPKAPK5-AS1Q8N8E1 139 aa10.86□□□□□ -0.67
USB1-206ENST00000562534 LINC00959A0A1B0GUT2 108 aa10.85□□□□□ -0.67
USB1-206ENST00000562534 ATP6V1G1O75348 118 aa10.85□□□□□ -0.67
USB1-206ENST00000562534 NPSP0C0P6 89 aa10.85□□□□□ -0.67
USB1-206ENST00000562534 KRTAP26-1Q6PEX3 210 aa10.85□□□□□ -0.67
USB1-206ENST00000562534 BAALCQ8WXS3 180 aa10.85□□□□□ -0.67
USB1-206ENST00000562534 TOMM6Q96B49 74 aa10.85□□□□□ -0.67
USB1-206ENST00000562534 AP5S1Q9NUS5 200 aa10.85□□□□□ -0.67
USB1-206ENST00000562534 C1orf196B1AJZ1 125 aa10.84□□□□□ -0.67
USB1-206ENST00000562534 PGPEP1Q9NXJ5 209 aa10.84□□□□□ -0.67
USB1-206ENST00000562534 DNAH2Q9P225 4427 aa10.84□□□□□ -0.67
USB1-206ENST00000562534 PAPPA-AS1Q5QFB9 102 aa10.83□□□□□ -0.68
USB1-206ENST00000562534 CHCHD10Q8WYQ3 142 aaPredicted RBP10.83□□□□□ -0.68
USB1-206ENST00000562534 DNAH10Q8IVF4 4471 aa10.83□□□□□ -0.68
USB1-206ENST00000562534 IGIPA6NJ69 53 aa10.82□□□□□ -0.68
USB1-206ENST00000562534 Q6ZN92 141 aa10.82□□□□□ -0.68
USB1-206ENST00000562534 Q6ZUT4 128 aa10.82□□□□□ -0.68
USB1-206ENST00000562534 ERASQ7Z444 233 aa10.82□□□□□ -0.68
USB1-206ENST00000562534 FAM104AQ969W3 186 aa10.82□□□□□ -0.68
USB1-206ENST00000562534 TMEM141Q96I45 108 aa10.82□□□□□ -0.68
USB1-206ENST00000562534 OPRPNQ99935 248 aaPredicted RBP10.82□□□□□ -0.68
USB1-206ENST00000562534 IGLV4-3A0A075B6K6 122 aa10.81□□□□□ -0.68
USB1-206ENST00000562534 GAGE12HA6NDE8 117 aa10.81□□□□□ -0.68
USB1-206ENST00000562534 C14orf177Q52M58 125 aa10.81□□□□□ -0.68
USB1-206ENST00000562534 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
USB1-206ENST00000562534 SPATA12Q7Z6I5 190 aa10.81□□□□□ -0.68
USB1-206ENST00000562534 Q8N814 137 aa10.81□□□□□ -0.68
USB1-206ENST00000562534 SCGB3A1Q96QR1 104 aa10.81□□□□□ -0.68
USB1-206ENST00000562534 TIMM17AQ99595 171 aa10.81□□□□□ -0.68
USB1-206ENST00000562534 VCX2Q9H322 139 aa10.81□□□□□ -0.68
USB1-206ENST00000562534 TRAV13-1A0A0B4J241 112 aa10.8□□□□□ -0.68
USB1-206ENST00000562534 CD164L2Q6UWJ8 174 aa10.8□□□□□ -0.68
USB1-206ENST00000562534 TEX43Q6ZNM6 134 aa10.8□□□□□ -0.68
USB1-206ENST00000562534 BAGE3Q86Y29 109 aa10.8□□□□□ -0.68
USB1-206ENST00000562534 CHCHD1Q96BP2 118 aaKnown RBP10.8□□□□□ -0.68
USB1-206ENST00000562534 URB1-AS1Q96HZ7 61 aa10.8□□□□□ -0.68
USB1-206ENST00000562534 FRAS1Q86XX4 4008 aa10.8□□□□□ -0.68
USB1-206ENST00000562534 DNAH17Q9UFH2 4485 aa10.8□□□□□ -0.68
USB1-206ENST00000562534 LECT2O14960 151 aa10.79□□□□□ -0.68
USB1-206ENST00000562534 XCL1P47992 114 aa10.79□□□□□ -0.68
USB1-206ENST00000562534 CFAP161Q6P656 301 aa10.79□□□□□ -0.68
USB1-206ENST00000562534 IFITM10A6NMD0 228 aa10.78□□□□□ -0.68
USB1-206ENST00000562534 CDPF1Q6NVV7 123 aa10.78□□□□□ -0.68
USB1-206ENST00000562534 NTN5Q8WTR8 489 aaPredicted RBP10.78□□□□□ -0.68
USB1-206ENST00000562534 AMELXQ99217 191 aa10.78□□□□□ -0.68
USB1-206ENST00000562534 C2orf88Q9BSF0 95 aa10.78□□□□□ -0.68
USB1-206ENST00000562534 USP17L23D6RBM5 183 aa10.77□□□□□ -0.69
USB1-206ENST00000562534 FOXI1Q12951 378 aa10.77□□□□□ -0.69
USB1-206ENST00000562534 WFDC2Q14508 124 aa10.77□□□□□ -0.69
USB1-206ENST00000562534 HBDP02042 147 aa10.76□□□□□ -0.69
USB1-206ENST00000562534 KRTAP10-2P60368 255 aa10.76□□□□□ -0.69
USB1-206ENST00000562534 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.75□□□□□ -0.69
USB1-206ENST00000562534 A0A096LNJ9 63 aa10.74□□□□□ -0.69
USB1-206ENST00000562534 HSBP1O75506 76 aa10.74□□□□□ -0.69
USB1-206ENST00000562534 FAT2Q9NYQ8 4349 aa10.74□□□□□ -0.69
USB1-206ENST00000562534 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
USB1-206ENST00000562534 C16orf90A8MZG2 172 aa10.73□□□□□ -0.69
USB1-206ENST00000562534 COX7A2LO14548 114 aa10.73□□□□□ -0.69
USB1-206ENST00000562534 ATP5LO75964 103 aa10.73□□□□□ -0.69
USB1-206ENST00000562534 UBE2D1P51668 147 aa10.73□□□□□ -0.69
USB1-206ENST00000562534 SEC11AP67812 179 aa10.73□□□□□ -0.69
USB1-206ENST00000562534 PMCHL1Q16048 86 aa10.73□□□□□ -0.69
USB1-206ENST00000562534 PDZD11Q5EBL8 140 aa10.73□□□□□ -0.69
USB1-206ENST00000562534 IGHV1-58A0A0C4DH39 117 aa10.72□□□□□ -0.69
USB1-206ENST00000562534 PRSS1P07477 247 aa10.72□□□□□ -0.69
USB1-206ENST00000562534 MALP21145 153 aa10.72□□□□□ -0.69
USB1-206ENST00000562534 LINC00242Q5T6M2 205 aa10.72□□□□□ -0.69
USB1-206ENST00000562534 LINC00173Q6ZV60 143 aa10.72□□□□□ -0.69
USB1-206ENST00000562534 FAM19A3Q7Z5A8 133 aa10.72□□□□□ -0.69
USB1-206ENST00000562534 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.71□□□□□ -0.69
USB1-206ENST00000562534 IGHV3OR16-9A0A0B4J2B5 98 aa10.71□□□□□ -0.69
USB1-206ENST00000562534 hDV102S1A0JD36 115 aa10.71□□□□□ -0.69
USB1-206ENST00000562534 PMVKQ15126 192 aa10.71□□□□□ -0.69
USB1-206ENST00000562534 ZC2HC1BQ5TFG8 222 aa10.71□□□□□ -0.69
USB1-206ENST00000562534 CST9LQ9H4G1 147 aa10.71□□□□□ -0.69
USB1-206ENST00000562534 HIST1H2BKO60814 126 aa10.7□□□□□ -0.7
USB1-206ENST00000562534 SERF1AO75920 110 aa10.7□□□□□ -0.7
USB1-206ENST00000562534 APOMO95445 188 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms