RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SMCO4Q9NRQ5 59 aa8.87□□□□□ -0.99
CDH1-204ENST00000562118 WFDC2Q14508 124 aa8.86□□□□□ -0.99
CDH1-204ENST00000562118 KIAA1644Q3SXP7 199 aa8.86□□□□□ -0.99
CDH1-204ENST00000562118 CBLN2Q8IUK8 224 aa8.86□□□□□ -0.99
CDH1-204ENST00000562118 OR5A1Q8NGJ0 315 aa8.86□□□□□ -0.99
CDH1-204ENST00000562118 C1orf43Q9BWL3 253 aa8.86□□□□□ -0.99
CDH1-204ENST00000562118 PYGO1Q9Y3Y4 419 aa8.86□□□□□ -0.99
CDH1-204ENST00000562118 IGKV2D-24A0A075B6R9 120 aa8.85□□□□□ -0.99
CDH1-204ENST00000562118 MRPS36P82909 103 aaKnown RBP8.85□□□□□ -0.99
CDH1-204ENST00000562118 SMAGPQ0VAQ4 97 aa8.85□□□□□ -0.99
CDH1-204ENST00000562118 AMMECR1LQ6DCA0 310 aa8.85□□□□□ -0.99
CDH1-204ENST00000562118 CDPF1Q6NVV7 123 aa8.85□□□□□ -0.99
CDH1-204ENST00000562118 TMEM18Q96B42 140 aa8.85□□□□□ -0.99
CDH1-204ENST00000562118 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
CDH1-204ENST00000562118 PSCAO43653 123 aa8.84□□□□□ -0.99
CDH1-204ENST00000562118 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
CDH1-204ENST00000562118 CLPSL2Q6UWE3 100 aa8.84□□□□□ -0.99
CDH1-204ENST00000562118 ZNF664Q8N3J9 261 aa8.84□□□□□ -0.99
CDH1-204ENST00000562118 Q8N814 137 aa8.84□□□□□ -0.99
CDH1-204ENST00000562118 SPANXA1Q9NS26 97 aa8.84□□□□□ -0.99
CDH1-204ENST00000562118 RYR1P21817 5038 aa8.84□□□□□ -0.99
CDH1-204ENST00000562118 NPSP0C0P6 89 aa8.83□□□□□ -1
CDH1-204ENST00000562118 IFI27P40305 119 aaPredicted RBP8.83□□□□□ -1
CDH1-204ENST00000562118 ORMDL2Q53FV1 153 aa8.83□□□□□ -1
CDH1-204ENST00000562118 RNASEKQ6P5S7 137 aaKnown RBP8.83□□□□□ -1
CDH1-204ENST00000562118 SPATA12Q7Z6I5 190 aa8.83□□□□□ -1
CDH1-204ENST00000562118 NTN5Q8WTR8 489 aaPredicted RBP8.83□□□□□ -1
CDH1-204ENST00000562118 TMEM101Q96IK0 257 aa8.83□□□□□ -1
CDH1-204ENST00000562118 TRAPPC1Q9Y5R8 145 aa8.83□□□□□ -1
CDH1-204ENST00000562118 LOC389332A0A1B0GUA5 103 aa8.82□□□□□ -1
CDH1-204ENST00000562118 CCL25O15444 150 aa8.82□□□□□ -1
CDH1-204ENST00000562118 RAB5AP20339 215 aa8.82□□□□□ -1
CDH1-204ENST00000562118 FABP9Q0Z7S8 132 aa8.82□□□□□ -1
CDH1-204ENST00000562118 Q6ZUT4 128 aa8.82□□□□□ -1
CDH1-204ENST00000562118 PGPEP1Q9NXJ5 209 aa8.82□□□□□ -1
CDH1-204ENST00000562118 HSPG2P98160 4391 aa8.81□□□□□ -1
CDH1-204ENST00000562118 HERC2O95714 4834 aa8.81□□□□□ -1
CDH1-204ENST00000562118 LINC00959A0A1B0GUT2 108 aa8.81□□□□□ -1
CDH1-204ENST00000562118 EREGO14944 169 aa8.81□□□□□ -1
CDH1-204ENST00000562118 C18orf32Q8TCD1 76 aa8.81□□□□□ -1
CDH1-204ENST00000562118 IGIPA6NJ69 53 aa8.8□□□□□ -1
CDH1-204ENST00000562118 COLCA2A8K830 154 aa8.8□□□□□ -1
CDH1-204ENST00000562118 FOXI1Q12951 378 aa8.8□□□□□ -1
CDH1-204ENST00000562118 BAALCQ8WXS3 180 aa8.8□□□□□ -1
CDH1-204ENST00000562118 URB1-AS1Q96HZ7 61 aa8.8□□□□□ -1
CDH1-204ENST00000562118 IGLV10-54A0A075B6I4 117 aa8.79□□□□□ -1
CDH1-204ENST00000562118 IGLV4-3A0A075B6K6 122 aa8.79□□□□□ -1
CDH1-204ENST00000562118 C2orf66Q6UXQ4 117 aa8.79□□□□□ -1
CDH1-204ENST00000562118 CHCHD10Q8WYQ3 142 aaPredicted RBP8.79□□□□□ -1
CDH1-204ENST00000562118 TOMM6Q96B49 74 aa8.79□□□□□ -1
CDH1-204ENST00000562118 CYSLTR1Q9Y271 337 aa8.79□□□□□ -1
CDH1-204ENST00000562118 AMELXQ99217 191 aa8.78□□□□□ -1
CDH1-204ENST00000562118 TIMM17AQ99595 171 aa8.78□□□□□ -1
CDH1-204ENST00000562118 A0A096LNJ9 63 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 LINC01549A6NIU2 74 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 C16orf90A8MZG2 172 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 G0S2P27469 103 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 C14orf177Q52M58 125 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 DGAT2L7PQ6IED9 249 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 LINC00173Q6ZV60 143 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 FAM19A3Q7Z5A8 133 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 C15orf56Q8N910 161 aa8.77□□□□□ -1.01
CDH1-204ENST00000562118 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
CDH1-204ENST00000562118 C1orf196B1AJZ1 125 aa8.76□□□□□ -1.01
CDH1-204ENST00000562118 LECT2O14960 151 aa8.76□□□□□ -1.01
CDH1-204ENST00000562118 PRSS3P2Q8NHM4 247 aa8.76□□□□□ -1.01
CDH1-204ENST00000562118 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
CDH1-204ENST00000562118 PRSS1P07477 247 aa8.75□□□□□ -1.01
CDH1-204ENST00000562118 SS18Q15532 418 aa8.75□□□□□ -1.01
CDH1-204ENST00000562118 RNASE13Q5GAN3 156 aaKnown RBP8.75□□□□□ -1.01
CDH1-204ENST00000562118 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
CDH1-204ENST00000562118 AP5S1Q9NUS5 200 aa8.75□□□□□ -1.01
CDH1-204ENST00000562118 GVQW2A0A096LPI5 108 aaPredicted RBP8.74□□□□□ -1.01
CDH1-204ENST00000562118 IGKV3OR2-268A0A0C4DH90 116 aa8.74□□□□□ -1.01
CDH1-204ENST00000562118 CDK2AP2O75956 126 aa8.74□□□□□ -1.01
CDH1-204ENST00000562118 LINC00614P0C842 121 aa8.74□□□□□ -1.01
CDH1-204ENST00000562118 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
CDH1-204ENST00000562118 ERASQ7Z444 233 aa8.74□□□□□ -1.01
CDH1-204ENST00000562118 IGLV5-52A0A0A0MRZ9 124 aa8.73□□□□□ -1.01
CDH1-204ENST00000562118 IGHV3OR16-9A0A0B4J2B5 98 aa8.73□□□□□ -1.01
CDH1-204ENST00000562118 TRGC2P03986 189 aa8.73□□□□□ -1.01
CDH1-204ENST00000562118 FUSP35637 526 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDH1-204ENST00000562118 XCL1P47992 114 aa8.73□□□□□ -1.01
CDH1-204ENST00000562118 FA2HQ7L5A8 372 aa8.73□□□□□ -1.01
CDH1-204ENST00000562118 SCO1O75880 301 aa8.72□□□□□ -1.01
CDH1-204ENST00000562118 GCSHP23434 173 aa8.72□□□□□ -1.01
CDH1-204ENST00000562118 UBE2D1P51668 147 aa8.72□□□□□ -1.01
CDH1-204ENST00000562118 KRTAP10-1P60331 282 aa8.72□□□□□ -1.01
CDH1-204ENST00000562118 Q6ZSA8 131 aa8.72□□□□□ -1.01
CDH1-204ENST00000562118 TRAV13-1A0A0B4J241 112 aa8.71□□□□□ -1.02
CDH1-204ENST00000562118 IFITM10A6NMD0 228 aa8.71□□□□□ -1.02
CDH1-204ENST00000562118 SLPIP03973 132 aa8.71□□□□□ -1.02
CDH1-204ENST00000562118 RAB5BP61020 215 aa8.71□□□□□ -1.02
CDH1-204ENST00000562118 PDZD11Q5EBL8 140 aa8.71□□□□□ -1.02
CDH1-204ENST00000562118 LINC00242Q5T6M2 205 aa8.71□□□□□ -1.02
CDH1-204ENST00000562118 CFAP161Q6P656 301 aa8.71□□□□□ -1.02
CDH1-204ENST00000562118 TEX43Q6ZNM6 134 aa8.71□□□□□ -1.02
CDH1-204ENST00000562118 CHCHD1Q96BP2 118 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms