RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 Q8NAQ8 132 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 C20orf203Q8NBC4 194 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 DEFB104AQ8WTQ1 72 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 KIR2DL4Q99706 377 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 MIEN1Q9BRT3 115 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 CHCHD7Q9BUK0 85 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 HHLA3Q9XRX5 114 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 CYSLTR1Q9Y271 337 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 NBEAL1Q6ZS30 2694 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
CAPN3-210ENST00000561817 LINC01549A6NIU2 74 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.6□□□□□ -1.67
CAPN3-210ENST00000561817 K7EQD1 137 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 UBE2D3P61077 147 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 UBE2D2P62837 147 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 DEFB135Q30KP9 77 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 SLC25A29Q8N8R3 303 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 C14orf144Q96I85 54 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 SCGB3A1Q96QR1 104 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 TIMM17AQ99595 171 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 TP53TG1Q9Y2A0 90 aa4.6□□□□□ -1.67
CAPN3-210ENST00000561817 TRBV7-3A0A075B6L6 115 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 IGHV4-28A0A0C4DH34 117 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 TRBV6-4A0A1B0GX49 114 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 PRSS1P07477 247 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 FGF6P10767 208 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 DEFB121Q5J5C9 76 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 NTM-AS1Q6ZSK4 140 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 Q75L30 129 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 SBSPONQ8IVN8 264 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 OR11H2Q8NH07 326 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 TMEM141Q96I45 108 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 MRPL35Q9NZE8 188 aaKnown RBP4.59□□□□□ -1.67
CAPN3-210ENST00000561817 PYGO1Q9Y3Y4 419 aa4.59□□□□□ -1.67
CAPN3-210ENST00000561817 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 NOTCH1P46531 2555 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 IGLV4-69A0A075B6H9 119 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 TRGV2A0A075B6R0 118 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 LOC100131303A0A0U1RQF7 123 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 LYRM9A8MSI8 78 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 F8VRH5 84 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 DPM2O94777 84 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 MIFP14174 115 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 EMP1P54849 157 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 ZC2HC1BQ5TFG8 222 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 FAM222AQ5U5X8 452 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 STPG4Q8N801 248 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 ZNRF2Q8NHG8 242 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 OPRPNQ99935 248 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-210ENST00000561817 CST9LQ9H4G1 147 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 UQCR10Q9UDW1 63 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 TP73-AS1Q9UF72 201 aa4.58□□□□□ -1.68
CAPN3-210ENST00000561817 MGAM2Q2M2H8 2515 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 IGKV2D-26A0A0A0MRZ7 120 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 IGHV3-38A0A0C4DH36 116 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 A0A1B0GV72 72 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 IGKCP01834 107 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 NPSP0C0P6 89 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 COX8AP10176 69 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 RPL36AP83881 106 aaKnown RBP4.57□□□□□ -1.68
CAPN3-210ENST00000561817 PMVKQ15126 192 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 KPRPQ5T749 579 aaPredicted RBP4.57□□□□□ -1.68
CAPN3-210ENST00000561817 Q6ZN92 141 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 DAZ4Q86SG3 579 aaKnown RBP4.57□□□□□ -1.68
CAPN3-210ENST00000561817 PRR26Q8N8Z3 221 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 PHLDA1Q8WV24 401 aaPredicted RBP4.57□□□□□ -1.68
CAPN3-210ENST00000561817 RPL36ALQ969Q0 106 aaKnown RBP4.57□□□□□ -1.68
CAPN3-210ENST00000561817 AMELXQ99217 191 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 TIMM21Q9BVV7 248 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 DAZ3Q9NR90 486 aaKnown RBP4.57□□□□□ -1.68
CAPN3-210ENST00000561817 CELA1Q9UNI1 258 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 UBE2D4Q9Y2X8 147 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 TENM3Q9P273 2699 aa4.57□□□□□ -1.68
CAPN3-210ENST00000561817 TRGV4A0A0C4DH28 118 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 GAGE12JA6NER3 117 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 C11orf86A6NJI1 115 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 K7EIL1 84 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 DEFB4AO15263 64 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 DLEU1O43261 78 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 DEFB130BP0DP73 79 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 DEFB130AP0DP74 79 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 PLNP26678 52 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 CRYBA4P53673 196 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 GAGE1Q13065 139 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 GAGE4Q13068 117 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 GAGE5Q13069 117 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 C2orf91Q6ZV80 131 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 NFE4Q86UQ8 179 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 GTSF1LQ9H1H1 148 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 RETNQ9HD89 108 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 SPANXA1Q9NS26 97 aa4.56□□□□□ -1.68
CAPN3-210ENST00000561817 MRPS16Q9Y3D3 137 aaKnown RBP4.56□□□□□ -1.68
CAPN3-210ENST00000561817 FBN3Q75N90 2809 aa4.55□□□□□ -1.68
CAPN3-210ENST00000561817 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.55□□□□□ -1.68
CAPN3-210ENST00000561817 IGKV2-29A2NJV5 120 aaPredicted RBP4.55□□□□□ -1.68
CAPN3-210ENST00000561817 F5H768 121 aa4.55□□□□□ -1.68
CAPN3-210ENST00000561817 RBX1P62877 108 aa4.55□□□□□ -1.68
CAPN3-210ENST00000561817 MRPS36P82909 103 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms