RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TRBV10-1A0A0K0K1A3 114 aa7.68□□□□□ -1.18
CARMIL3-204ENST00000561354 PPBPP02775 128 aa7.68□□□□□ -1.18
CARMIL3-204ENST00000561354 OR5AL1P0C617 328 aa7.68□□□□□ -1.18
CARMIL3-204ENST00000561354 LINC00310P59036 64 aa7.68□□□□□ -1.18
CARMIL3-204ENST00000561354 FAM74A4Q5TZK3 123 aa7.68□□□□□ -1.18
CARMIL3-204ENST00000561354 TMEM191AQ9H0A3 160 aa7.68□□□□□ -1.18
CARMIL3-204ENST00000561354 LAMTOR2Q9Y2Q5 125 aa7.68□□□□□ -1.18
CARMIL3-204ENST00000561354 TMSB15BA0A087X1C1 80 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 SNAI2O43623 268 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 HSBP1O75506 76 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 AMTP48728 403 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 UBE2D3P61077 147 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 UBE2D2P62837 147 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 RPL36AP83881 106 aaKnown RBP7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 TWIST1Q15672 202 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 FAM104BQ5XKR9 115 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 SMIM15Q7Z3B0 74 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 RPL36ALQ969Q0 106 aaKnown RBP7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 C1orf43Q9BWL3 253 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 PHLDA3Q9Y5J5 127 aa7.67□□□□□ -1.18
CARMIL3-204ENST00000561354 TRBV7-3A0A075B6L6 115 aa7.66□□□□□ -1.18
CARMIL3-204ENST00000561354 A0A087WWL8 130 aa7.66□□□□□ -1.18
CARMIL3-204ENST00000561354 RPL37AP61513 92 aaKnown RBP7.66□□□□□ -1.18
CARMIL3-204ENST00000561354 ENHOQ6UWT2 76 aa7.66□□□□□ -1.18
CARMIL3-204ENST00000561354 ORMDL3Q8N138 153 aa7.66□□□□□ -1.18
CARMIL3-204ENST00000561354 NUPR1O60356 82 aa7.65□□□□□ -1.18
CARMIL3-204ENST00000561354 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.18
CARMIL3-204ENST00000561354 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
CARMIL3-204ENST00000561354 TMEM262E9PQX1 116 aa7.64□□□□□ -1.19
CARMIL3-204ENST00000561354 TSTD3H0UI37 97 aa7.64□□□□□ -1.19
CARMIL3-204ENST00000561354 M0R381 172 aa7.64□□□□□ -1.19
CARMIL3-204ENST00000561354 CRPP02741 224 aa7.64□□□□□ -1.19
CARMIL3-204ENST00000561354 LINC00614P0C842 121 aa7.64□□□□□ -1.19
CARMIL3-204ENST00000561354 NTF3P20783 257 aa7.64□□□□□ -1.19
CARMIL3-204ENST00000561354 DGAT2L7PQ6IED9 249 aa7.64□□□□□ -1.19
CARMIL3-204ENST00000561354 RNASEKQ6P5S7 137 aaKnown RBP7.64□□□□□ -1.19
CARMIL3-204ENST00000561354 PCP4L1A6NKN8 68 aa7.63□□□□□ -1.19
CARMIL3-204ENST00000561354 USP17L23D6RBM5 183 aa7.63□□□□□ -1.19
CARMIL3-204ENST00000561354 SCGB1D1O95968 90 aa7.63□□□□□ -1.19
CARMIL3-204ENST00000561354 HNRNPA3P51991 378 aaKnown RBP7.63□□□□□ -1.19
CARMIL3-204ENST00000561354 PKIAP61925 76 aa7.63□□□□□ -1.19
CARMIL3-204ENST00000561354 MIAQ16674 131 aa7.63□□□□□ -1.19
CARMIL3-204ENST00000561354 C9orf163Q8N9P6 203 aa7.63□□□□□ -1.19
CARMIL3-204ENST00000561354 PRELID3AQ96N28 172 aa7.63□□□□□ -1.19
CARMIL3-204ENST00000561354 CKS2P33552 79 aa7.62□□□□□ -1.19
CARMIL3-204ENST00000561354 MRPL51Q4U2R6 128 aaKnown RBP7.62□□□□□ -1.19
CARMIL3-204ENST00000561354 MPV17L2Q567V2 206 aa7.62□□□□□ -1.19
CARMIL3-204ENST00000561354 SPANXN1Q5VSR9 72 aa7.62□□□□□ -1.19
CARMIL3-204ENST00000561354 FA2HQ7L5A8 372 aa7.62□□□□□ -1.19
CARMIL3-204ENST00000561354 AMN1Q8IY45 258 aa7.62□□□□□ -1.19
CARMIL3-204ENST00000561354 AP5S1Q9NUS5 200 aa7.62□□□□□ -1.19
CARMIL3-204ENST00000561354 D6R8Y8 96 aa7.61□□□□□ -1.19
CARMIL3-204ENST00000561354 ANGP03950 147 aaKnown RBP7.61□□□□□ -1.19
CARMIL3-204ENST00000561354 PRSS1P07477 247 aa7.61□□□□□ -1.19
CARMIL3-204ENST00000561354 C4orf48Q5BLP8 95 aa7.61□□□□□ -1.19
CARMIL3-204ENST00000561354 NEXN-AS1Q8NBZ9 246 aa7.61□□□□□ -1.19
CARMIL3-204ENST00000561354 PRSS3P2Q8NHM4 247 aa7.61□□□□□ -1.19
CARMIL3-204ENST00000561354 MRAP2Q96G30 205 aa7.61□□□□□ -1.19
CARMIL3-204ENST00000561354 PRR34Q9NV39 138 aa7.61□□□□□ -1.19
CARMIL3-204ENST00000561354 HSPB8Q9UJY1 196 aa7.61□□□□□ -1.19
CARMIL3-204ENST00000561354 IGHV1-24A0A0C4DH33 117 aa7.6□□□□□ -1.19
CARMIL3-204ENST00000561354 KRTDAPP60985 99 aa7.6□□□□□ -1.19
CARMIL3-204ENST00000561354 PMCHL1Q16048 86 aa7.6□□□□□ -1.19
CARMIL3-204ENST00000561354 TEX43Q6ZNM6 134 aa7.6□□□□□ -1.19
CARMIL3-204ENST00000561354 OR10AG1Q8NH19 301 aa7.6□□□□□ -1.19
CARMIL3-204ENST00000561354 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
CARMIL3-204ENST00000561354 MAP1LC3AQ9H492 121 aa7.6□□□□□ -1.19
CARMIL3-204ENST00000561354 NXT2Q9NPJ8 142 aaKnown RBP7.6□□□□□ -1.19
CARMIL3-204ENST00000561354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.6□□□□□ -1.19
CARMIL3-204ENST00000561354 C20orf202A1L168 122 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 LINC01546A6NGU7 62 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 PRSS47A8MTI9 375 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 PPP1R17O96001 155 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 MT1HL1P0DM35 61 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 TMEM97Q5BJF2 176 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 KRTAP26-1Q6PEX3 210 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 SDIM1Q6ZPB5 146 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 Q6ZRU5 148 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 FAM19A2Q8N3H0 131 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 RNF185Q96GF1 192 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 URB1-AS1Q96HZ7 61 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 CHCHD5Q9BSY4 110 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 DPH3P1Q9H4G8 78 aa7.59□□□□□ -1.19
CARMIL3-204ENST00000561354 LEPROTL1O95214 131 aa7.58□□□□□ -1.2
CARMIL3-204ENST00000561354 C3orf79P0CE67 100 aa7.58□□□□□ -1.2
CARMIL3-204ENST00000561354 ZNF56Q15929 161 aa7.58□□□□□ -1.2
CARMIL3-204ENST00000561354 NTM-AS1Q6ZSK4 140 aa7.58□□□□□ -1.2
CARMIL3-204ENST00000561354 MUC21A0A0G2JKD1 596 aa7.57□□□□□ -1.2
CARMIL3-204ENST00000561354 MUC21A0A140T8X8 626 aa7.57□□□□□ -1.2
CARMIL3-204ENST00000561354 PANO1I0J062 215 aa7.57□□□□□ -1.2
CARMIL3-204ENST00000561354 K7EMI3 77 aa7.57□□□□□ -1.2
CARMIL3-204ENST00000561354 RBX1P62877 108 aa7.57□□□□□ -1.2
CARMIL3-204ENST00000561354 CIRBPQ14011 172 aaKnown RBP7.57□□□□□ -1.2
CARMIL3-204ENST00000561354 VAMP8Q9BV40 100 aa7.57□□□□□ -1.2
CARMIL3-204ENST00000561354 MAP1LC3CQ9BXW4 147 aa7.57□□□□□ -1.2
CARMIL3-204ENST00000561354 TNFRSF6BO95407 300 aa7.56□□□□□ -1.2
CARMIL3-204ENST00000561354 NPYP01303 97 aa7.56□□□□□ -1.2
CARMIL3-204ENST00000561354 SSTP61278 116 aa7.56□□□□□ -1.2
CARMIL3-204ENST00000561354 CNBPP62633 177 aaKnown RBP7.56□□□□□ -1.2
CARMIL3-204ENST00000561354 PET117Q6UWS5 81 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms