RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 MXRA5Q9NR99 2828 aa-0.69□□□□□ -2.52
USP8-218ENST00000561330 ARAP2Q8WZ64 1704 aa-0.69□□□□□ -2.52
USP8-218ENST00000561330 SETD2Q9BYW2 2564 aaPredicted RBP-0.69□□□□□ -2.52
USP8-218ENST00000561330 DISP2A7MBM2 1401 aa-0.69□□□□□ -2.52
USP8-218ENST00000561330 HCG22E2RYF7 251 aa-0.69□□□□□ -2.52
USP8-218ENST00000561330 M0R2Z0 102 aa-0.69□□□□□ -2.52
USP8-218ENST00000561330 RBM3P98179 157 aaKnown RBP-0.69□□□□□ -2.52
USP8-218ENST00000561330 KLK9Q2XQG4 91 aa-0.69□□□□□ -2.52
USP8-218ENST00000561330 AIF1LQ9BQI0 150 aa-0.69□□□□□ -2.52
USP8-218ENST00000561330 BTAF1O14981 1849 aa-0.69□□□□□ -2.52
USP8-218ENST00000561330 ADGRB1O14514 1584 aa-0.7□□□□□ -2.52
USP8-218ENST00000561330 TRAV13-2A0A0B4J235 113 aa-0.7□□□□□ -2.52
USP8-218ENST00000561330 SIX6O95475 246 aa-0.7□□□□□ -2.52
USP8-218ENST00000561330 NBEAP1P0C6P0 100 aa-0.7□□□□□ -2.52
USP8-218ENST00000561330 KCNRGQ8N5I3 272 aa-0.7□□□□□ -2.52
USP8-218ENST00000561330 TTC9CQ8N5M4 171 aa-0.7□□□□□ -2.52
USP8-218ENST00000561330 DEFB105AQ8NG35 78 aa-0.7□□□□□ -2.52
USP8-218ENST00000561330 GSKIPQ9P0R6 139 aa-0.7□□□□□ -2.52
USP8-218ENST00000561330 IQSEC2Q5JU85 1478 aa-0.7□□□□□ -2.52
USP8-218ENST00000561330 MYH7P12883 1935 aa-0.71□□□□□ -2.52
USP8-218ENST00000561330 APOC3P02656 99 aa-0.71□□□□□ -2.52
USP8-218ENST00000561330 SCIMPQ6UWF3 145 aa-0.71□□□□□ -2.52
USP8-218ENST00000561330 BAGE2Q86Y30 109 aa-0.71□□□□□ -2.52
USP8-218ENST00000561330 LENEPQ9Y5L5 61 aa-0.71□□□□□ -2.52
USP8-218ENST00000561330 POLA1P09884 1462 aaPredicted RBP-0.72□□□□□ -2.52
USP8-218ENST00000561330 ZNF518AQ6AHZ1 1483 aa-0.72□□□□□ -2.52
USP8-218ENST00000561330 PXDNQ92626 1479 aa-0.72□□□□□ -2.52
USP8-218ENST00000561330 IFT140Q96RY7 1462 aa-0.72□□□□□ -2.52
USP8-218ENST00000561330 PIGBOS1A0A0B4J2F0 54 aa-0.72□□□□□ -2.52
USP8-218ENST00000561330 GUCA1AP43080 201 aaPredicted RBP-0.72□□□□□ -2.52
USP8-218ENST00000561330 CKS1BP61024 79 aa-0.72□□□□□ -2.52
USP8-218ENST00000561330 TSTD1Q8NFU3 115 aa-0.72□□□□□ -2.52
USP8-218ENST00000561330 F8VRH5 84 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 SYS1-DBNDD2H3BUS1 97 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 NCR2O95944 276 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 TSPAN19P0C672 248 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 S100A5P33763 92 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 KRTAP6-2Q3LI66 62 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 LZICQ8WZA0 190 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 LINC00472Q9H8W2 130 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 TPT1P8Q9HAU6 139 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 UBR4Q5T4S7 5183 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 STARD9Q9P2P6 4700 aa-0.73□□□□□ -2.53
USP8-218ENST00000561330 BICRAQ9NZM4 1560 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 UQCR11O14957 56 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 SPRR2AP35326 72 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 TPPP2P59282 170 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 COPZ1P61923 177 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 ALX1Q15699 326 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 Q6AWC8 147 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 DEFB123Q8N688 67 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 AMELXQ99217 191 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 NBASA2RRP1 2371 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 DOPEY1Q5JWR5 2465 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 PPIP5K1Q6PFW1 1433 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 PRG4Q92954 1404 aaPredicted RBP-0.74□□□□□ -2.53
USP8-218ENST00000561330 GAPVD1Q14C86 1478 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 ARHGEF12Q9NZN5 1544 aa-0.74□□□□□ -2.53
USP8-218ENST00000561330 SPAARA0A1B0GVQ0 90 aa-0.75□□□□□ -2.53
USP8-218ENST00000561330 IGLC7A0M8Q6 106 aa-0.75□□□□□ -2.53
USP8-218ENST00000561330 SCGB1A1P11684 91 aa-0.75□□□□□ -2.53
USP8-218ENST00000561330 HIST1H1DP16402 221 aaKnown RBP-0.75□□□□□ -2.53
USP8-218ENST00000561330 DEFB135Q30KP9 77 aa-0.75□□□□□ -2.53
USP8-218ENST00000561330 MAFIPQ8WZ33 124 aa-0.75□□□□□ -2.53
USP8-218ENST00000561330 APLNQ9ULZ1 77 aa-0.75□□□□□ -2.53
USP8-218ENST00000561330 SPG11Q96JI7 2443 aa-0.75□□□□□ -2.53
USP8-218ENST00000561330 NBPF19A0A087WUL8 3843 aa-0.75□□□□□ -2.53
USP8-218ENST00000561330 RYR3Q15413 4870 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 SMCO1Q147U7 214 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 FDCSPQ8NFU4 85 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 TCEAL4Q96EI5 215 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 PDCD10Q9BUL8 212 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 DYNLRB1Q9NP97 96 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 NDUFA4L2Q9NRX3 87 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 FHAD1B1AJZ9 1412 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 SHANK2Q9UPX8 1470 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 FMN2Q9NZ56 1722 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 DNAH6Q9C0G6 4158 aa-0.76□□□□□ -2.53
USP8-218ENST00000561330 EPPK1P58107 5090 aaKnown RBP-0.77□□□□□ -2.53
USP8-218ENST00000561330 NSD3Q9BZ95 1437 aa-0.77□□□□□ -2.53
USP8-218ENST00000561330 ANKRD30AQ9BXX3 1397 aa-0.77□□□□□ -2.53
USP8-218ENST00000561330 TRBV7-4A0A0J9YYF1 115 aa-0.77□□□□□ -2.53
USP8-218ENST00000561330 COX8AP10176 69 aa-0.77□□□□□ -2.53
USP8-218ENST00000561330 RPS25P62851 125 aaKnown RBP-0.77□□□□□ -2.53
USP8-218ENST00000561330 MGST2Q99735 147 aa-0.77□□□□□ -2.53
USP8-218ENST00000561330 COPZ2Q9P299 210 aa-0.77□□□□□ -2.53
USP8-218ENST00000561330 KNL1Q8NG31 2342 aa-0.77□□□□□ -2.53
USP8-218ENST00000561330 RIMS1Q86UR5 1692 aaKnown RBP-0.78□□□□□ -2.53
USP8-218ENST00000561330 RAPGEF6Q8TEU7 1601 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 ARPC5O15511 151 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 IFNGP01579 166 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 SPRR2EP22531 72 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 PYDC1Q8WXC3 89 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 COPS9Q8WXC6 57 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 TSLPQ969D9 159 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 TMEM191AQ9H0A3 160 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 FAIMQ9NVQ4 179 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 LINC01558Q9Y6Z2 57 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 SPTBN4Q9H254 2564 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 EPG5Q9HCE0 2579 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms