RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 ZC2HC1BQ5TFG8 222 aa7.78□□□□□ -1.16
SNX1-212ENST00000560861 Q6ZN92 141 aa7.78□□□□□ -1.16
SNX1-212ENST00000560861 Q6ZUT4 128 aa7.78□□□□□ -1.16
SNX1-212ENST00000560861 PMCHL2Q9BQD1 86 aa7.78□□□□□ -1.16
SNX1-212ENST00000560861 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
SNX1-212ENST00000560861 IGLV4-69A0A075B6H9 119 aa7.77□□□□□ -1.17
SNX1-212ENST00000560861 H0Y8G0 127 aa7.77□□□□□ -1.17
SNX1-212ENST00000560861 MRPL35Q9NZE8 188 aaKnown RBP7.77□□□□□ -1.17
SNX1-212ENST00000560861 F8VRH5 84 aa7.76□□□□□ -1.17
SNX1-212ENST00000560861 GAGE6Q13070 117 aa7.76□□□□□ -1.17
SNX1-212ENST00000560861 LELP1Q5T871 98 aa7.76□□□□□ -1.17
SNX1-212ENST00000560861 LYPD5Q6UWN5 251 aa7.76□□□□□ -1.17
SNX1-212ENST00000560861 ATOH7Q8N100 152 aa7.76□□□□□ -1.17
SNX1-212ENST00000560861 CDC42SE2Q9NRR3 84 aa7.76□□□□□ -1.17
SNX1-212ENST00000560861 TRAV9-2A0A087WT02 112 aa7.75□□□□□ -1.17
SNX1-212ENST00000560861 ZNF25P17030 456 aaPredicted RBP7.75□□□□□ -1.17
SNX1-212ENST00000560861 MAJINQ3KP22 176 aa7.75□□□□□ -1.17
SNX1-212ENST00000560861 CHTOPQ9Y3Y2 248 aaKnown RBP7.75□□□□□ -1.17
SNX1-212ENST00000560861 DNAH7Q8WXX0 4024 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 RYR3Q15413 4870 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 A0A1B0GUV1 79 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 DPM2O94777 84 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 IGLC3P0DOY3 106 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 SMAGPQ0VAQ4 97 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 PAPPA-AS1Q5QFB9 102 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 LCE2CQ5TA81 110 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 FAM19A3Q7Z5A8 133 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 NFE4Q86UQ8 179 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 ZNF664Q8N3J9 261 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 C15orf53Q8NAA6 179 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 CHCHD5Q9BSY4 110 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 VCX2Q9H322 139 aa7.74□□□□□ -1.17
SNX1-212ENST00000560861 IGLV4-60A0A075B6I1 120 aa7.73□□□□□ -1.17
SNX1-212ENST00000560861 C11orf86A6NJI1 115 aa7.73□□□□□ -1.17
SNX1-212ENST00000560861 UBE2L6O14933 153 aa7.73□□□□□ -1.17
SNX1-212ENST00000560861 IGKCP01834 107 aa7.73□□□□□ -1.17
SNX1-212ENST00000560861 RBX1P62877 108 aa7.73□□□□□ -1.17
SNX1-212ENST00000560861 ESRGQ1W209 222 aa7.73□□□□□ -1.17
SNX1-212ENST00000560861 RNASE13Q5GAN3 156 aaKnown RBP7.73□□□□□ -1.17
SNX1-212ENST00000560861 OR5A1Q8NGJ0 315 aa7.73□□□□□ -1.17
SNX1-212ENST00000560861 hDV102S1A0JD36 115 aa7.72□□□□□ -1.17
SNX1-212ENST00000560861 PLNP26678 52 aa7.72□□□□□ -1.17
SNX1-212ENST00000560861 UBE2D1P51668 147 aa7.72□□□□□ -1.17
SNX1-212ENST00000560861 MPV17L2Q567V2 206 aa7.72□□□□□ -1.17
SNX1-212ENST00000560861 AMMECR1LQ6DCA0 310 aa7.72□□□□□ -1.17
SNX1-212ENST00000560861 DGAT2L7PQ6IED9 249 aa7.72□□□□□ -1.17
SNX1-212ENST00000560861 VAMP8Q9BV40 100 aa7.72□□□□□ -1.17
SNX1-212ENST00000560861 A0A0J9YXV3 536 aa7.71□□□□□ -1.18
SNX1-212ENST00000560861 S100A12P80511 92 aa7.71□□□□□ -1.18
SNX1-212ENST00000560861 ANKRD39Q53RE8 183 aa7.71□□□□□ -1.18
SNX1-212ENST00000560861 Q8N3U1 123 aa7.71□□□□□ -1.18
SNX1-212ENST00000560861 TMEM101Q96IK0 257 aa7.71□□□□□ -1.18
SNX1-212ENST00000560861 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
SNX1-212ENST00000560861 ZNF22P17026 224 aaPredicted RBP7.7□□□□□ -1.18
SNX1-212ENST00000560861 SPATA45Q537H7 98 aa7.7□□□□□ -1.18
SNX1-212ENST00000560861 STPG4Q8N801 248 aa7.7□□□□□ -1.18
SNX1-212ENST00000560861 PAM16Q9Y3D7 125 aa7.7□□□□□ -1.18
SNX1-212ENST00000560861 TINCRA0A1B0GVN0 87 aa7.69□□□□□ -1.18
SNX1-212ENST00000560861 PKIAP61925 76 aa7.69□□□□□ -1.18
SNX1-212ENST00000560861 LINC00242Q5T6M2 205 aa7.69□□□□□ -1.18
SNX1-212ENST00000560861 WFDC10BQ8IUB3 73 aa7.69□□□□□ -1.18
SNX1-212ENST00000560861 C2orf88Q9BSF0 95 aa7.69□□□□□ -1.18
SNX1-212ENST00000560861 CHAC1Q9BUX1 264 aa7.69□□□□□ -1.18
SNX1-212ENST00000560861 APLNQ9ULZ1 77 aa7.69□□□□□ -1.18
SNX1-212ENST00000560861 TRAV8-6A0A0B4J262 113 aa7.68□□□□□ -1.18
SNX1-212ENST00000560861 IGLL5B9A064 214 aa7.68□□□□□ -1.18
SNX1-212ENST00000560861 MRPS16Q9Y3D3 137 aaKnown RBP7.68□□□□□ -1.18
SNX1-212ENST00000560861 CSMD3Q7Z407 3707 aa7.67□□□□□ -1.18
SNX1-212ENST00000560861 IGKV2D-26A0A0A0MRZ7 120 aa7.67□□□□□ -1.18
SNX1-212ENST00000560861 TMEM262E9PQX1 116 aa7.67□□□□□ -1.18
SNX1-212ENST00000560861 COX6A2Q02221 97 aa7.67□□□□□ -1.18
SNX1-212ENST00000560861 PRO1933Q9H354 126 aa7.67□□□□□ -1.18
SNX1-212ENST00000560861 LINC00588Q9Y4M8 146 aa7.67□□□□□ -1.18
SNX1-212ENST00000560861 PLECQ15149 4684 aaKnown RBP7.67□□□□□ -1.18
SNX1-212ENST00000560861 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
SNX1-212ENST00000560861 HSBP1L1C9JCN9 74 aa7.66□□□□□ -1.18
SNX1-212ENST00000560861 UPK3BQ9BT76 320 aa7.66□□□□□ -1.18
SNX1-212ENST00000560861 PRR34Q9NV39 138 aa7.66□□□□□ -1.18
SNX1-212ENST00000560861 TRAV13-1A0A0B4J241 112 aa7.65□□□□□ -1.18
SNX1-212ENST00000560861 LINC00959A0A1B0GUT2 108 aa7.65□□□□□ -1.18
SNX1-212ENST00000560861 NUPR2A6NF83 97 aa7.65□□□□□ -1.18
SNX1-212ENST00000560861 E9PLD3 99 aa7.65□□□□□ -1.18
SNX1-212ENST00000560861 DNAH10OSP0CZ25 163 aa7.65□□□□□ -1.18
SNX1-212ENST00000560861 LINC01556Q5JQF7 62 aa7.65□□□□□ -1.18
SNX1-212ENST00000560861 STARD9Q9P2P6 4700 aa7.64□□□□□ -1.19
SNX1-212ENST00000560861 COX8AP10176 69 aa7.64□□□□□ -1.19
SNX1-212ENST00000560861 HERVK_113P63121 156 aa7.64□□□□□ -1.19
SNX1-212ENST00000560861 SEC11AP67812 179 aa7.64□□□□□ -1.19
SNX1-212ENST00000560861 LINC00269Q8N2A0 174 aa7.64□□□□□ -1.19
SNX1-212ENST00000560861 CDKN2A-AS1Q9UH64 79 aa7.64□□□□□ -1.19
SNX1-212ENST00000560861 TENM2Q9NT68 2774 aa7.64□□□□□ -1.19
SNX1-212ENST00000560861 IGHV3OR16-9A0A0B4J2B5 98 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 IGLV5-39A0A0G2JS06 123 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 CCL25O15444 150 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 ANGP03950 147 aaKnown RBP7.63□□□□□ -1.19
SNX1-212ENST00000560861 CCL18P55774 89 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 TCTAP57738 103 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 REG3AQ06141 175 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 TMEM170BQ5T4T1 132 aa7.63□□□□□ -1.19
SNX1-212ENST00000560861 ENHOQ6UWT2 76 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms