RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 Q6ZUT4 128 aa-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 CTAGE3PQ8IX95 158 aa-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 SPTSSBQ8NFR3 76 aa-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 SDF2Q99470 211 aa-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 WDR7Q9Y4E6 1490 aa-1.26□□□□□ -2.61
PSMA4-221ENST00000560842 CCL8P80075 99 aa-1.27□□□□□ -2.61
PSMA4-221ENST00000560842 HIST1H1AQ02539 215 aaPredicted RBP-1.27□□□□□ -2.61
PSMA4-221ENST00000560842 AGPAT4-IT1Q9H0P7 198 aa-1.27□□□□□ -2.61
PSMA4-221ENST00000560842 MRPL40Q9NQ50 206 aaKnown RBP-1.27□□□□□ -2.61
PSMA4-221ENST00000560842 RYR2Q92736 4967 aa-1.27□□□□□ -2.61
PSMA4-221ENST00000560842 NIPBLQ6KC79 2804 aaeCLIP-1.28□□□□□ -2.61
PSMA4-221ENST00000560842 SPTBN4Q9H254 2564 aa-1.28□□□□□ -2.61
PSMA4-221ENST00000560842 TSC2P49815 1807 aa-1.28□□□□□ -2.61
PSMA4-221ENST00000560842 PRDM2Q13029 1718 aa-1.28□□□□□ -2.61
PSMA4-221ENST00000560842 PPP1R17O96001 155 aa-1.28□□□□□ -2.61
PSMA4-221ENST00000560842 IL5P05113 134 aa-1.28□□□□□ -2.61
PSMA4-221ENST00000560842 NEFHP12036 1026 aa-1.28□□□□□ -2.61
PSMA4-221ENST00000560842 AIF1LQ9BQI0 150 aa-1.28□□□□□ -2.61
PSMA4-221ENST00000560842 SONP18583 2426 aaKnown RBP-1.28□□□□□ -2.61
PSMA4-221ENST00000560842 RNF213Q63HN8 5207 aa-1.29□□□□□ -2.62
PSMA4-221ENST00000560842 CUBNO60494 3623 aa-1.29□□□□□ -2.62
PSMA4-221ENST00000560842 CTXND1A0A1B0GTU2 59 aa-1.29□□□□□ -2.62
PSMA4-221ENST00000560842 LINC00694P0DN24 101 aa-1.29□□□□□ -2.62
PSMA4-221ENST00000560842 B2MP61769 119 aa-1.29□□□□□ -2.62
PSMA4-221ENST00000560842 PSMG3Q9BT73 122 aaPredicted RBP-1.29□□□□□ -2.62
PSMA4-221ENST00000560842 DNAH9Q9NYC9 4486 aa-1.29□□□□□ -2.62
PSMA4-221ENST00000560842 NWD2Q9ULI1 1742 aa-1.29□□□□□ -2.62
PSMA4-221ENST00000560842 LRRC37A2A6NM11 1700 aa-1.3□□□□□ -2.62
PSMA4-221ENST00000560842 SNCGO76070 127 aa-1.31□□□□□ -2.62
PSMA4-221ENST00000560842 NDUFB6O95139 128 aa-1.31□□□□□ -2.62
PSMA4-221ENST00000560842 COX17Q14061 63 aa-1.31□□□□□ -2.62
PSMA4-221ENST00000560842 TMEM170BQ5T4T1 132 aa-1.31□□□□□ -2.62
PSMA4-221ENST00000560842 Q6JHZ5 121 aa-1.31□□□□□ -2.62
PSMA4-221ENST00000560842 DEFB123Q8N688 67 aa-1.31□□□□□ -2.62
PSMA4-221ENST00000560842 SPTSSAQ969W0 71 aa-1.31□□□□□ -2.62
PSMA4-221ENST00000560842 FXYD6Q9H0Q3 95 aa-1.31□□□□□ -2.62
PSMA4-221ENST00000560842 PAPPAQ13219 1627 aa-1.31□□□□□ -2.62
PSMA4-221ENST00000560842 NBASA2RRP1 2371 aa-1.32□□□□□ -2.62
PSMA4-221ENST00000560842 CASKIN1Q8WXD9 1431 aa-1.32□□□□□ -2.62
PSMA4-221ENST00000560842 SIX6O95475 246 aa-1.32□□□□□ -2.62
PSMA4-221ENST00000560842 TNFP01375 233 aa-1.32□□□□□ -2.62
PSMA4-221ENST00000560842 ALX1Q15699 326 aa-1.32□□□□□ -2.62
PSMA4-221ENST00000560842 IQSEC2Q5JU85 1478 aa-1.32□□□□□ -2.62
PSMA4-221ENST00000560842 RRAS2P62070 204 aaPredicted RBP-1.33□□□□□ -2.62
PSMA4-221ENST00000560842 S100A7L2Q5SY68 101 aa-1.33□□□□□ -2.62
PSMA4-221ENST00000560842 SCIMPQ6UWF3 145 aa-1.33□□□□□ -2.62
PSMA4-221ENST00000560842 MAFIPQ8WZ33 124 aa-1.33□□□□□ -2.62
PSMA4-221ENST00000560842 SPRR2FQ96RM1 72 aa-1.34□□□□□ -2.62
PSMA4-221ENST00000560842 SEC11CQ9BY50 192 aa-1.34□□□□□ -2.62
PSMA4-221ENST00000560842 AKAP13Q12802 2813 aa-1.34□□□□□ -2.62
PSMA4-221ENST00000560842 TEP1Q99973 2627 aaKnown RBP-1.35□□□□□ -2.62
PSMA4-221ENST00000560842 ANK3Q12955 4377 aaKnown RBP-1.35□□□□□ -2.62
PSMA4-221ENST00000560842 IFT140Q96RY7 1462 aa-1.35□□□□□ -2.63
PSMA4-221ENST00000560842 J3QR89 54 aa-1.35□□□□□ -2.63
PSMA4-221ENST00000560842 SMIM3Q9BZL3 60 aa-1.35□□□□□ -2.63
PSMA4-221ENST00000560842 LINC00472Q9H8W2 130 aa-1.35□□□□□ -2.63
PSMA4-221ENST00000560842 LENEPQ9Y5L5 61 aa-1.35□□□□□ -2.63
PSMA4-221ENST00000560842 MYH8P13535 1937 aa-1.35□□□□□ -2.63
PSMA4-221ENST00000560842 BICRAQ9NZM4 1560 aa-1.35□□□□□ -2.63
PSMA4-221ENST00000560842 VPS13BQ7Z7G8 4022 aa-1.35□□□□□ -2.63
PSMA4-221ENST00000560842 LYSTQ99698 3801 aa-1.35□□□□□ -2.63
PSMA4-221ENST00000560842 MRC1P22897 1456 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 PLECQ15149 4684 aaKnown RBP-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 ZZEF1O43149 2961 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 SPAARA0A1B0GVQ0 90 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 HCG22E2RYF7 251 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 C10orf128Q5T292 105 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 DEFB105AQ8NG35 78 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 AQP10Q96PS8 301 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 AMELXQ99217 191 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 GSKIPQ9P0R6 139 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 V9GYH0 126 aa-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 ANKRD11Q6UB99 2663 aaPredicted RBP-1.36□□□□□ -2.63
PSMA4-221ENST00000560842 FHAD1B1AJZ9 1412 aa-1.37□□□□□ -2.63
PSMA4-221ENST00000560842 CKS1BP61024 79 aa-1.37□□□□□ -2.63
PSMA4-221ENST00000560842 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.37□□□□□ -2.634e-9■■■■□ 24
PSMA4-221ENST00000560842 KALRNO60229 2985 aa-1.37□□□□□ -2.63
PSMA4-221ENST00000560842 DMXL1Q9Y485 3027 aa-1.38□□□□□ -2.63
PSMA4-221ENST00000560842 TRAV13-2A0A0B4J235 113 aa-1.38□□□□□ -2.63
PSMA4-221ENST00000560842 BAGE2Q86Y30 109 aa-1.38□□□□□ -2.63
PSMA4-221ENST00000560842 TEX15Q9BXT5 2789 aa-1.38□□□□□ -2.63
PSMA4-221ENST00000560842 GAPVD1Q14C86 1478 aa-1.38□□□□□ -2.63
PSMA4-221ENST00000560842 DOCK1Q14185 1865 aa-1.39□□□□□ -2.63
PSMA4-221ENST00000560842 PIGBOS1A0A0B4J2F0 54 aa-1.39□□□□□ -2.63
PSMA4-221ENST00000560842 UQCR11O14957 56 aa-1.39□□□□□ -2.63
PSMA4-221ENST00000560842 APOC3P02656 99 aa-1.39□□□□□ -2.63
PSMA4-221ENST00000560842 GUCA1AP43080 201 aaPredicted RBP-1.39□□□□□ -2.63
PSMA4-221ENST00000560842 TPPP2P59282 170 aa-1.39□□□□□ -2.63
PSMA4-221ENST00000560842 PYDC1Q8WXC3 89 aa-1.39□□□□□ -2.63
PSMA4-221ENST00000560842 ZNF236Q9UL36 1845 aa-1.39□□□□□ -2.63
PSMA4-221ENST00000560842 ZNF518AQ6AHZ1 1483 aa-1.39□□□□□ -2.63
PSMA4-221ENST00000560842 KNL1Q8NG31 2342 aa-1.4□□□□□ -2.63
PSMA4-221ENST00000560842 F8VRH5 84 aa-1.4□□□□□ -2.63
PSMA4-221ENST00000560842 M0R2Z0 102 aa-1.4□□□□□ -2.63
PSMA4-221ENST00000560842 Q6AWC8 147 aa-1.4□□□□□ -2.63
PSMA4-221ENST00000560842 KCNRGQ8N5I3 272 aa-1.4□□□□□ -2.63
PSMA4-221ENST00000560842 ANKRD30AQ9BXX3 1397 aa-1.4□□□□□ -2.63
PSMA4-221ENST00000560842 A0A0C4DFX4 3053 aa-1.41□□□□□ -2.63
PSMA4-221ENST00000560842 POLA1P09884 1462 aaPredicted RBP-1.41□□□□□ -2.63
PSMA4-221ENST00000560842 ACACAQ13085 2346 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms