RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 GATD1Q8NB37 220 aa6.9□□□□□ -1.31
TRPM1-212ENST00000560801 LINC00474Q9P2X8 69 aa6.9□□□□□ -1.31
TRPM1-212ENST00000560801 LYPD5Q6UWN5 251 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 NBDYA0A0U1RRE5 68 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 H7C423 109 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 IGLV2-8P01709 118 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 FHL2Q14192 279 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 ODF1Q14990 250 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 ATMQ13315 3056 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 TENM4Q6N022 2769 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 SOCS3O14543 225 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 X6R8D5 127 aa6.89□□□□□ -1.31
TRPM1-212ENST00000560801 TRBV24-1A0A075B6N3 115 aa6.88□□□□□ -1.31
TRPM1-212ENST00000560801 WFDC10BQ8IUB3 73 aa6.88□□□□□ -1.31
TRPM1-212ENST00000560801 CR1P17927 2039 aa6.88□□□□□ -1.31
TRPM1-212ENST00000560801 ZC2HC1BQ5TFG8 222 aa6.88□□□□□ -1.31
TRPM1-212ENST00000560801 PGPEP1Q9NXJ5 209 aa6.88□□□□□ -1.31
TRPM1-212ENST00000560801 DMXL1Q9Y485 3027 aa6.88□□□□□ -1.31
TRPM1-212ENST00000560801 RNASE3P12724 160 aaKnown RBP6.88□□□□□ -1.31
TRPM1-212ENST00000560801 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
TRPM1-212ENST00000560801 PIK3CD-AS1Q5SR53 167 aa6.88□□□□□ -1.31
TRPM1-212ENST00000560801 Q8NAQ8 132 aa6.88□□□□□ -1.31
TRPM1-212ENST00000560801 C20orf203Q8NBC4 194 aa6.88□□□□□ -1.31
TRPM1-212ENST00000560801 K7EP13 123 aa6.87□□□□□ -1.31
TRPM1-212ENST00000560801 SNAI2O43623 268 aa6.87□□□□□ -1.31
TRPM1-212ENST00000560801 A8MZ25 164 aa6.87□□□□□ -1.31
TRPM1-212ENST00000560801 COX7B2Q8TF08 81 aa6.87□□□□□ -1.31
TRPM1-212ENST00000560801 VPS25Q9BRG1 176 aa6.87□□□□□ -1.31
TRPM1-212ENST00000560801 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
TRPM1-212ENST00000560801 J3QL48 77 aa6.86□□□□□ -1.31
TRPM1-212ENST00000560801 KALRNO60229 2985 aa6.86□□□□□ -1.31
TRPM1-212ENST00000560801 LGALS9CQ6DKI2 356 aa6.86□□□□□ -1.31
TRPM1-212ENST00000560801 MPV17L2Q567V2 206 aa6.86□□□□□ -1.31
TRPM1-212ENST00000560801 FABP2P12104 132 aa6.86□□□□□ -1.31
TRPM1-212ENST00000560801 M0QY20 66 aa6.86□□□□□ -1.31
TRPM1-212ENST00000560801 ESRGQ1W209 222 aa6.86□□□□□ -1.31
TRPM1-212ENST00000560801 LINC00467Q9BRT7 94 aa6.86□□□□□ -1.31
TRPM1-212ENST00000560801 SPATA45Q537H7 98 aa6.85□□□□□ -1.31
TRPM1-212ENST00000560801 FAM19A5Q7Z5A7 132 aaPredicted RBP6.85□□□□□ -1.31
TRPM1-212ENST00000560801 SNHG12Q9BXW3 62 aa6.85□□□□□ -1.31
TRPM1-212ENST00000560801 Q6ZUT4 128 aa6.85□□□□□ -1.31
TRPM1-212ENST00000560801 LINC00336Q6ZUF6 198 aa6.85□□□□□ -1.31
TRPM1-212ENST00000560801 SCRT2Q9NQ03 307 aa6.85□□□□□ -1.31
TRPM1-212ENST00000560801 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 UBE2D3P61077 147 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 UBE2D2P62837 147 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 LOC107984640A0A0U1RRK4 108 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 MRPS12O15235 138 aaKnown RBP6.84□□□□□ -1.31
TRPM1-212ENST00000560801 TACC2O95359 2948 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 NSD1Q96L73 2696 aaPredicted RBP6.84□□□□□ -1.31
TRPM1-212ENST00000560801 EYSQ5T1H1 3165 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 C19orf71A6NCJ1 209 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 IGLV2-11P01706 119 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 CASC10Q5T4H9 136 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 LINC00518Q8N0U6 118 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 HIGD2AQ9BW72 106 aa6.84□□□□□ -1.31
TRPM1-212ENST00000560801 IGLC6P0CF74 106 aa6.84□□□□□ -1.32
TRPM1-212ENST00000560801 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.32
TRPM1-212ENST00000560801 C11orf21Q9P2W6 132 aa6.84□□□□□ -1.32
TRPM1-212ENST00000560801 MUC4Q99102 2169 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 IGLV4-69A0A075B6H9 119 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 NDUFS6O75380 124 aaKnown RBP6.83□□□□□ -1.32
TRPM1-212ENST00000560801 UFSP1Q6NVU6 142 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 LAMTOR3Q9UHA4 124 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 C9JQL5 133 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 WIPF1O43516 503 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 LINC00315P59091 139 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 CD164L2Q6UWJ8 174 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 SPATA12Q7Z6I5 190 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 F8VRH5 84 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 HERV-K104P63124 156 aa6.83□□□□□ -1.32
TRPM1-212ENST00000560801 H3BNG1 76 aa6.82□□□□□ -1.32
TRPM1-212ENST00000560801 C18orf32Q8TCD1 76 aa6.82□□□□□ -1.32
TRPM1-212ENST00000560801 KMT2BQ9UMN6 2715 aaPredicted RBP6.82□□□□□ -1.32
TRPM1-212ENST00000560801 LINC00526Q96FQ7 95 aa6.82□□□□□ -1.32
TRPM1-212ENST00000560801 NBEAQ8NFP9 2946 aa6.82□□□□□ -1.32
TRPM1-212ENST00000560801 MLST8Q9BVC4 326 aa6.82□□□□□ -1.32
TRPM1-212ENST00000560801 MRPL35Q9NZE8 188 aaKnown RBP6.82□□□□□ -1.32
TRPM1-212ENST00000560801 ESDP10768 282 aa6.81□□□□□ -1.32
TRPM1-212ENST00000560801 CRIP1P50238 77 aa6.81□□□□□ -1.32
TRPM1-212ENST00000560801 OPRPNQ99935 248 aaPredicted RBP6.8□□□□□ -1.32
TRPM1-212ENST00000560801 PRO1933Q9H354 126 aa6.8□□□□□ -1.32
TRPM1-212ENST00000560801 LINC00588Q9Y4M8 146 aa6.8□□□□□ -1.32
TRPM1-212ENST00000560801 J3QQQ9 107 aa6.8□□□□□ -1.32
TRPM1-212ENST00000560801 DEFB105AQ8NG35 78 aa6.8□□□□□ -1.32
TRPM1-212ENST00000560801 ASH1LQ9NR48 2969 aaKnown RBP6.8□□□□□ -1.32
TRPM1-212ENST00000560801 LOC105371267A0A1B0GV96 52 aa6.8□□□□□ -1.32
TRPM1-212ENST00000560801 FAM19A1Q7Z5A9 133 aa6.8□□□□□ -1.32
TRPM1-212ENST00000560801 LINC01556Q5JQF7 62 aa6.79□□□□□ -1.32
TRPM1-212ENST00000560801 C9orf153Q5TBE3 101 aa6.79□□□□□ -1.32
TRPM1-212ENST00000560801 LINC00476Q8WZB0 136 aa6.79□□□□□ -1.32
TRPM1-212ENST00000560801 STPG4Q8N801 248 aa6.79□□□□□ -1.32
TRPM1-212ENST00000560801 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
TRPM1-212ENST00000560801 LAMA1P25391 3075 aa6.79□□□□□ -1.32
TRPM1-212ENST00000560801 APCP25054 2843 aa6.78□□□□□ -1.32
TRPM1-212ENST00000560801 LINC00959A0A1B0GUT2 108 aa6.78□□□□□ -1.32
TRPM1-212ENST00000560801 PLA2G1BP04054 148 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms