RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 C20orf202A1L168 122 aa6.48□□□□□ -1.37
TPM1-225ENST00000560679 SPANXN1Q5VSR9 72 aa6.48□□□□□ -1.37
TPM1-225ENST00000560679 RASL10AQ92737 203 aa6.48□□□□□ -1.37
TPM1-225ENST00000560679 MAP1LC3AQ9H492 121 aa6.48□□□□□ -1.37
TPM1-225ENST00000560679 TRAV4A0A0B4J268 109 aa6.47□□□□□ -1.37
TPM1-225ENST00000560679 SYS1-DBNDD2H3BUS1 97 aa6.47□□□□□ -1.37
TPM1-225ENST00000560679 S100A4P26447 101 aaKnown RBP6.47□□□□□ -1.37
TPM1-225ENST00000560679 IFI27P40305 119 aaPredicted RBP6.47□□□□□ -1.37
TPM1-225ENST00000560679 TDRG1Q3Y452 100 aa6.47□□□□□ -1.37
TPM1-225ENST00000560679 PET117Q6UWS5 81 aa6.47□□□□□ -1.37
TPM1-225ENST00000560679 LINC00173Q6ZV60 143 aa6.47□□□□□ -1.37
TPM1-225ENST00000560679 C14orf144Q96I85 54 aa6.47□□□□□ -1.37
TPM1-225ENST00000560679 PAM16Q9Y3D7 125 aa6.47□□□□□ -1.37
TPM1-225ENST00000560679 LOC389332A0A1B0GUA5 103 aa6.46□□□□□ -1.38
TPM1-225ENST00000560679 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
TPM1-225ENST00000560679 TNFRSF6BO95407 300 aa6.46□□□□□ -1.38
TPM1-225ENST00000560679 GATA1P15976 413 aaPredicted RBP6.46□□□□□ -1.38
TPM1-225ENST00000560679 RPL37AP61513 92 aaKnown RBP6.46□□□□□ -1.38
TPM1-225ENST00000560679 SPATA45Q537H7 98 aa6.46□□□□□ -1.38
TPM1-225ENST00000560679 SH2D6Q7Z4S9 175 aa6.46□□□□□ -1.38
TPM1-225ENST00000560679 MRAP2Q96G30 205 aa6.46□□□□□ -1.38
TPM1-225ENST00000560679 MIEN1Q9BRT3 115 aa6.46□□□□□ -1.38
TPM1-225ENST00000560679 TM2D2Q9BX73 214 aa6.46□□□□□ -1.38
TPM1-225ENST00000560679 MAP1LC3CQ9BXW4 147 aa6.46□□□□□ -1.38
TPM1-225ENST00000560679 NXT2Q9NPJ8 142 aaKnown RBP6.46□□□□□ -1.38
TPM1-225ENST00000560679 A0A096LNJ9 63 aa6.45□□□□□ -1.38
TPM1-225ENST00000560679 TRAV8-6A0A0B4J262 113 aa6.45□□□□□ -1.38
TPM1-225ENST00000560679 IGHV3-16A0A0C4DH30 117 aa6.45□□□□□ -1.38
TPM1-225ENST00000560679 HBDP02042 147 aa6.45□□□□□ -1.38
TPM1-225ENST00000560679 LELP1Q5T871 98 aa6.45□□□□□ -1.38
TPM1-225ENST00000560679 FAM159AQ6UWV7 190 aa6.45□□□□□ -1.38
TPM1-225ENST00000560679 BAALCQ8WXS3 180 aa6.45□□□□□ -1.38
TPM1-225ENST00000560679 AP1S3Q96PC3 154 aa6.45□□□□□ -1.38
TPM1-225ENST00000560679 PHLDA3Q9Y5J5 127 aa6.45□□□□□ -1.38
TPM1-225ENST00000560679 PRSS47A8MTI9 375 aa6.44□□□□□ -1.38
TPM1-225ENST00000560679 M0R381 172 aa6.44□□□□□ -1.38
TPM1-225ENST00000560679 GNRH2O43555 120 aa6.44□□□□□ -1.38
TPM1-225ENST00000560679 RNASE3P12724 160 aaKnown RBP6.44□□□□□ -1.38
TPM1-225ENST00000560679 MRPL52Q86TS9 123 aaKnown RBP6.44□□□□□ -1.38
TPM1-225ENST00000560679 ATOH7Q8N100 152 aa6.44□□□□□ -1.38
TPM1-225ENST00000560679 Q8N8P6 123 aa6.44□□□□□ -1.38
TPM1-225ENST00000560679 NRACQ8N912 160 aa6.44□□□□□ -1.38
TPM1-225ENST00000560679 OR4C5Q8NGB2 326 aa6.44□□□□□ -1.38
TPM1-225ENST00000560679 SPXQ9BT56 116 aa6.44□□□□□ -1.38
TPM1-225ENST00000560679 DPH3P1Q9H4G8 78 aa6.44□□□□□ -1.38
TPM1-225ENST00000560679 GAS8-AS1O95177 125 aa6.43□□□□□ -1.38
TPM1-225ENST00000560679 IGLC3P0DOY3 106 aa6.43□□□□□ -1.38
TPM1-225ENST00000560679 LINC01545Q5VT33 79 aa6.43□□□□□ -1.38
TPM1-225ENST00000560679 SLC25A29Q8N8R3 303 aa6.43□□□□□ -1.38
TPM1-225ENST00000560679 DNAJC30Q96LL9 226 aa6.43□□□□□ -1.38
TPM1-225ENST00000560679 UQCR10Q9UDW1 63 aa6.43□□□□□ -1.38
TPM1-225ENST00000560679 TRAV26-2A0A0B4J265 109 aa6.42□□□□□ -1.38
TPM1-225ENST00000560679 FCER1GP30273 86 aa6.42□□□□□ -1.38
TPM1-225ENST00000560679 LBHQ53QV2 105 aaPredicted RBP6.42□□□□□ -1.38
TPM1-225ENST00000560679 DAZ4Q86SG3 579 aaKnown RBP6.42□□□□□ -1.38
TPM1-225ENST00000560679 C9orf85Q96MD7 179 aa6.42□□□□□ -1.38
TPM1-225ENST00000560679 ST20Q9HBF5 79 aa6.42□□□□□ -1.38
TPM1-225ENST00000560679 DAZ3Q9NR90 486 aaKnown RBP6.42□□□□□ -1.38
TPM1-225ENST00000560679 TRGV11A0A075B6L2 103 aa6.41□□□□□ -1.38
TPM1-225ENST00000560679 TRAV8-3A0A0A6YYJ7 113 aa6.41□□□□□ -1.38
TPM1-225ENST00000560679 M0R143 59 aa6.41□□□□□ -1.38
TPM1-225ENST00000560679 M0R2P5 195 aa6.41□□□□□ -1.38
TPM1-225ENST00000560679 MGPP08493 103 aa6.41□□□□□ -1.38
TPM1-225ENST00000560679 MAJINQ3KP22 176 aa6.41□□□□□ -1.38
TPM1-225ENST00000560679 C14orf178Q8N769 122 aaPredicted RBP6.41□□□□□ -1.38
TPM1-225ENST00000560679 C20orf78Q9BR46 151 aa6.41□□□□□ -1.38
TPM1-225ENST00000560679 C2orf88Q9BSF0 95 aa6.41□□□□□ -1.38
TPM1-225ENST00000560679 SMIM2Q9BVW6 85 aa6.41□□□□□ -1.38
TPM1-225ENST00000560679 HSBP1L1C9JCN9 74 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 H0Y8G0 127 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 PPP1R17O96001 155 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 SMIM17P0DL12 118 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 ODF1Q14990 250 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 RHOHQ15669 191 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 ATP6V0E2Q8NHE4 81 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 IFI27L1Q96BM0 104 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 GTSF1LQ9H1H1 148 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 KIF25-AS1Q9Y6Z4 181 aa6.4□□□□□ -1.38
TPM1-225ENST00000560679 LPAP08519 4548 aa6.4□□□□□ -1.39
TPM1-225ENST00000560679 hDV102S1A0JD36 115 aa6.39□□□□□ -1.39
TPM1-225ENST00000560679 LINC00694P0DN24 101 aa6.39□□□□□ -1.39
TPM1-225ENST00000560679 SUMO2P61956 95 aaKnown RBP6.39□□□□□ -1.39
TPM1-225ENST00000560679 RPL32P62910 135 aaKnown RBP6.39□□□□□ -1.39
TPM1-225ENST00000560679 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
TPM1-225ENST00000560679 Q6ZN92 141 aa6.39□□□□□ -1.39
TPM1-225ENST00000560679 Q6ZRU5 148 aa6.39□□□□□ -1.39
TPM1-225ENST00000560679 SNHG12Q9BXW3 62 aa6.39□□□□□ -1.39
TPM1-225ENST00000560679 TRBV6-4A0A1B0GX49 114 aa6.38□□□□□ -1.39
TPM1-225ENST00000560679 PANO1I0J062 215 aa6.38□□□□□ -1.39
TPM1-225ENST00000560679 K7EMI3 77 aa6.38□□□□□ -1.39
TPM1-225ENST00000560679 ATP5LO75964 103 aa6.38□□□□□ -1.39
TPM1-225ENST00000560679 ORMDL2Q53FV1 153 aa6.38□□□□□ -1.39
TPM1-225ENST00000560679 RPL39LQ96EH5 51 aaKnown RBP6.38□□□□□ -1.39
TPM1-225ENST00000560679 PMCHL2Q9BQD1 86 aa6.38□□□□□ -1.39
TPM1-225ENST00000560679 PRADC1Q9BSG0 188 aa6.38□□□□□ -1.39
TPM1-225ENST00000560679 IGKV2D-24A0A075B6R9 120 aa6.37□□□□□ -1.39
TPM1-225ENST00000560679 IGHV3-73A0A0B4J1V6 119 aa6.37□□□□□ -1.39
TPM1-225ENST00000560679 SUMO4Q6EEV6 95 aa6.37□□□□□ -1.39
TPM1-225ENST00000560679 JPT2Q9H910 190 aa6.37□□□□□ -1.39
TPM1-225ENST00000560679 COX11Q9Y6N1 276 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 1051.2 ms