RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TRBV6-8A0A0A6YYG3 113 aa9.52□□□□□ -0.89
PKNOX1-209ENST00000560448 TCAPO15273 167 aa9.52□□□□□ -0.89
PKNOX1-209ENST00000560448 VAMP8Q9BV40 100 aa9.52□□□□□ -0.89
PKNOX1-209ENST00000560448 ST20Q9HBF5 79 aa9.52□□□□□ -0.89
PKNOX1-209ENST00000560448 IFI27L1Q96BM0 104 aa9.51□□□□□ -0.89
PKNOX1-209ENST00000560448 TRBV25-1A0A075B6N4 114 aa9.5□□□□□ -0.89
PKNOX1-209ENST00000560448 C20orf202A1L168 122 aa9.5□□□□□ -0.89
PKNOX1-209ENST00000560448 ORMDL2Q53FV1 153 aa9.5□□□□□ -0.89
PKNOX1-209ENST00000560448 PAM16Q9Y3D7 125 aa9.5□□□□□ -0.89
PKNOX1-209ENST00000560448 ATOH7Q8N100 152 aa9.49□□□□□ -0.89
PKNOX1-209ENST00000560448 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
PKNOX1-209ENST00000560448 TRBV27A0A0K0K1C4 114 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 VCYO14598 125 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 RTL8CO15255 209 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 DDTP30046 118 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 MAJINQ3KP22 176 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 KRTAP1-5Q9BYS1 174 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 A0A087WX48 190 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 SDHAF1A6NFY7 115 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 IBA57-AS1B1ANH7 110 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 SPATA45Q537H7 98 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
PKNOX1-209ENST00000560448 ATP5LO75964 103 aa9.47□□□□□ -0.89
PKNOX1-209ENST00000560448 COTL1Q14019 142 aa9.47□□□□□ -0.89
PKNOX1-209ENST00000560448 TRAV8-3A0A0A6YYJ7 113 aa9.46□□□□□ -0.9
PKNOX1-209ENST00000560448 PRSS29PA6NIE9 313 aa9.46□□□□□ -0.9
PKNOX1-209ENST00000560448 H0Y8G0 127 aa9.46□□□□□ -0.9
PKNOX1-209ENST00000560448 PMCHL2Q9BQD1 86 aa9.46□□□□□ -0.9
PKNOX1-209ENST00000560448 MIEN1Q9BRT3 115 aa9.45□□□□□ -0.9
PKNOX1-209ENST00000560448 CHCHD5Q9BSY4 110 aa9.45□□□□□ -0.9
PKNOX1-209ENST00000560448 COX11Q9Y6N1 276 aa9.45□□□□□ -0.9
PKNOX1-209ENST00000560448 hDV102S1A0JD36 115 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 H7C423 109 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 I3L3M4 83 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 IGLC3P0DOY3 106 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 IGHV3-30-3P0DP02 117 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 ODF1Q14990 250 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 C2orf66Q6UXQ4 117 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 NTM-AS1Q6ZSK4 140 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 KIR2DL4Q99706 377 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
PKNOX1-209ENST00000560448 A0A1B0GUV1 79 aa9.43□□□□□ -0.9
PKNOX1-209ENST00000560448 TMEM262E9PQX1 116 aa9.43□□□□□ -0.9
PKNOX1-209ENST00000560448 TSHBP01222 138 aa9.43□□□□□ -0.9
PKNOX1-209ENST00000560448 G0S2P27469 103 aa9.43□□□□□ -0.9
PKNOX1-209ENST00000560448 RMI2Q96E14 147 aa9.43□□□□□ -0.9
PKNOX1-209ENST00000560448 BIRC6Q9NR09 4857 aa9.43□□□□□ -0.9
PKNOX1-209ENST00000560448 LINC01549A6NIU2 74 aa9.42□□□□□ -0.9
PKNOX1-209ENST00000560448 PRSS1P07477 247 aa9.42□□□□□ -0.9
PKNOX1-209ENST00000560448 Q6ZRN7 208 aaPredicted RBP9.42□□□□□ -0.9
PKNOX1-209ENST00000560448 SCGB3A1Q96QR1 104 aa9.42□□□□□ -0.9
PKNOX1-209ENST00000560448 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
PKNOX1-209ENST00000560448 IGIPA6NJ69 53 aa9.41□□□□□ -0.9
PKNOX1-209ENST00000560448 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.41□□□□□ -0.9
PKNOX1-209ENST00000560448 UBE2L6O14933 153 aa9.41□□□□□ -0.9
PKNOX1-209ENST00000560448 ERASQ7Z444 233 aa9.41□□□□□ -0.9
PKNOX1-209ENST00000560448 C14orf144Q96I85 54 aa9.41□□□□□ -0.9
PKNOX1-209ENST00000560448 CYSLTR1Q9Y271 337 aa9.41□□□□□ -0.9
PKNOX1-209ENST00000560448 FRAS1Q86XX4 4008 aa9.4□□□□□ -0.9
PKNOX1-209ENST00000560448 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.9
PKNOX1-209ENST00000560448 UQCR10Q9UDW1 63 aa9.4□□□□□ -0.9
PKNOX1-209ENST00000560448 DNAH2Q9P225 4427 aa9.4□□□□□ -0.91
PKNOX1-209ENST00000560448 DNAH10Q8IVF4 4471 aa9.4□□□□□ -0.91
PKNOX1-209ENST00000560448 EREGO14944 169 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 CRPP02741 224 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 SMAGPQ0VAQ4 97 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 DEFB104AQ8WTQ1 72 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 HSBP1L1C9JCN9 74 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 PSCAO43653 123 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 ANGP03950 147 aaKnown RBP9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 ZNF25P17030 456 aaPredicted RBP9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 RPL39P62891 51 aaKnown RBP9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 Q6ZN92 141 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 C20orf203Q8NBC4 194 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 BAALCQ8WXS3 180 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 TIMM17AQ99595 171 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 KLK12Q9UKR0 248 aa9.39□□□□□ -0.91
PKNOX1-209ENST00000560448 RBX1P62877 108 aa9.38□□□□□ -0.91
PKNOX1-209ENST00000560448 TNP2Q05952 138 aa9.38□□□□□ -0.91
PKNOX1-209ENST00000560448 MIAQ16674 131 aa9.38□□□□□ -0.91
PKNOX1-209ENST00000560448 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
PKNOX1-209ENST00000560448 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
PKNOX1-209ENST00000560448 PRR34Q9NV39 138 aa9.38□□□□□ -0.91
PKNOX1-209ENST00000560448 DPM2O94777 84 aa9.37□□□□□ -0.91
PKNOX1-209ENST00000560448 IGKCP01834 107 aa9.37□□□□□ -0.91
PKNOX1-209ENST00000560448 GAGE6Q13070 117 aa9.37□□□□□ -0.91
PKNOX1-209ENST00000560448 Q9HAA7 133 aa9.37□□□□□ -0.91
PKNOX1-209ENST00000560448 MRPL35Q9NZE8 188 aaKnown RBP9.37□□□□□ -0.91
PKNOX1-209ENST00000560448 Q8N3U1 123 aa9.36□□□□□ -0.91
PKNOX1-209ENST00000560448 STPG4Q8N801 248 aa9.36□□□□□ -0.91
PKNOX1-209ENST00000560448 UBE2WQ96B02 151 aa9.36□□□□□ -0.91
PKNOX1-209ENST00000560448 FAT2Q9NYQ8 4349 aa9.35□□□□□ -0.91
PKNOX1-209ENST00000560448 TRAV8-4A0A0B4J246 113 aa9.35□□□□□ -0.91
PKNOX1-209ENST00000560448 F8VRH5 84 aa9.35□□□□□ -0.91
PKNOX1-209ENST00000560448 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms