RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
TRAF3-208ENST00000560371 ZNF702PQ9H963 129 aa10.08□□□□□ -0.8
TRAF3-208ENST00000560371 SS18L2Q9UHA2 77 aa10.08□□□□□ -0.8
TRAF3-208ENST00000560371 UBE2D4Q9Y2X8 147 aa10.08□□□□□ -0.8
TRAF3-208ENST00000560371 TRAV10A0A0B4J240 114 aa10.07□□□□□ -0.8
TRAF3-208ENST00000560371 JMJD7-PLA2G4BH0Y9G9 81 aa10.07□□□□□ -0.8
TRAF3-208ENST00000560371 A0A087WZ39 114 aa10.07□□□□□ -0.8
TRAF3-208ENST00000560371 CHCHD10Q8WYQ3 142 aaPredicted RBP10.07□□□□□ -0.8
TRAF3-208ENST00000560371 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.07□□□□□ -0.8
TRAF3-208ENST00000560371 Q6ZPA2 131 aa10.07□□□□□ -0.8
TRAF3-208ENST00000560371 GDF5OSQ5U4N7 250 aa10.06□□□□□ -0.8
TRAF3-208ENST00000560371 LINC00467Q9BRT7 94 aa10.06□□□□□ -0.8
TRAF3-208ENST00000560371 NPSP0C0P6 89 aa10.06□□□□□ -0.8
TRAF3-208ENST00000560371 H7C423 109 aa10.06□□□□□ -0.8
TRAF3-208ENST00000560371 CDSNQ15517 529 aa10.06□□□□□ -0.8
TRAF3-208ENST00000560371 UBE2D1P51668 147 aa10.06□□□□□ -0.8
TRAF3-208ENST00000560371 C3orf22Q8N5N4 141 aa10.05□□□□□ -0.8
TRAF3-208ENST00000560371 B5MCH6 92 aa10.05□□□□□ -0.8
TRAF3-208ENST00000560371 COX7BP24311 80 aa10.05□□□□□ -0.8
TRAF3-208ENST00000560371 C11orf1Q9H5F2 150 aa10.05□□□□□ -0.8
TRAF3-208ENST00000560371 TRBV6-8A0A0A6YYG3 113 aa10.05□□□□□ -0.8
TRAF3-208ENST00000560371 TDRG1Q3Y452 100 aa10.05□□□□□ -0.8
TRAF3-208ENST00000560371 LINC00322Q6ZN03 302 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-208ENST00000560371 IGLV2-18A0A075B6J9 118 aa10.05□□□□□ -0.8
TRAF3-208ENST00000560371 TTTY13Q9BZ97 58 aa10.04□□□□□ -0.8
TRAF3-208ENST00000560371 HIGD1BQ9P298 99 aa10.04□□□□□ -0.8
TRAF3-208ENST00000560371 USP17L23D6RBM5 183 aa10.04□□□□□ -0.8
TRAF3-208ENST00000560371 FXYD2P54710 66 aa10.04□□□□□ -0.8
TRAF3-208ENST00000560371 HRCT1Q6UXD1 115 aa10.04□□□□□ -0.8
TRAF3-208ENST00000560371 CFAP126Q5VTH2 177 aa10.04□□□□□ -0.8
TRAF3-208ENST00000560371 SMR3AQ99954 134 aa10.04□□□□□ -0.8
TRAF3-208ENST00000560371 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-208ENST00000560371 KIR2DL5BQ8NHK3 375 aa10.03□□□□□ -0.8
TRAF3-208ENST00000560371 MLST8Q9BVC4 326 aa10.03□□□□□ -0.8
TRAF3-208ENST00000560371 EIF4EBP1Q13541 118 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-208ENST00000560371 KIR2DL5BA0A0G2JN68 375 aa10.03□□□□□ -0.8
TRAF3-208ENST00000560371 KIR2DL5BA0A0G2JPC4 375 aa10.03□□□□□ -0.8
TRAF3-208ENST00000560371 KPRPQ5T749 579 aaPredicted RBP10.03□□□□□ -0.8
TRAF3-208ENST00000560371 KIR2DL5AQ8N109 375 aa10.03□□□□□ -0.8
TRAF3-208ENST00000560371 NFE4Q86UQ8 179 aa10.03□□□□□ -0.8
TRAF3-208ENST00000560371 FRMD6-AS1P0C7T7 363 aa10.03□□□□□ -0.8
TRAF3-208ENST00000560371 IGKV2D-26A0A0A0MRZ7 120 aa10.02□□□□□ -0.8
TRAF3-208ENST00000560371 TRBV6-4A0A1B0GX49 114 aa10.02□□□□□ -0.8
TRAF3-208ENST00000560371 CEP350Q5VT06 3117 aa10.02□□□□□ -0.8
TRAF3-208ENST00000560371 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
TRAF3-208ENST00000560371 RETNQ9HD89 108 aa10.02□□□□□ -0.81
TRAF3-208ENST00000560371 OXLD1Q5BKU9 147 aa10.02□□□□□ -0.81
TRAF3-208ENST00000560371 C18orf65Q6ZTR6 163 aa10.02□□□□□ -0.81
TRAF3-208ENST00000560371 WFDC10AQ9H1F0 79 aa10.02□□□□□ -0.81
TRAF3-208ENST00000560371 Q6ZS46 218 aa10.02□□□□□ -0.81
TRAF3-208ENST00000560371 C7orf33Q8WU49 177 aa10.02□□□□□ -0.81
TRAF3-208ENST00000560371 TRBV10-2A0A0K0K1G8 114 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 CRIP3Q6Q6R5 217 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 WFDC10BQ8IUB3 73 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 MIAQ16674 131 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 A0A0B4J2C4 111 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 M0R2N4 97 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 LY6G6CO95867 125 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 IGHV4-30-4P0DP06 118 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 BBC3Q96PG8 261 aaPredicted RBP10.01□□□□□ -0.81
TRAF3-208ENST00000560371 CLEC2BQ92478 149 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 SPANXCQ9NY87 97 aa10.01□□□□□ -0.81
TRAF3-208ENST00000560371 IGLC6P0CF74 106 aa10□□□□□ -0.81
TRAF3-208ENST00000560371 Q8N976 141 aa10□□□□□ -0.81
TRAF3-208ENST00000560371 CDKN2A-AS1Q9UH64 79 aa10□□□□□ -0.81
TRAF3-208ENST00000560371 A0A1B0GXF2 115 aa10□□□□□ -0.81
TRAF3-208ENST00000560371 FOXI1Q12951 378 aa10□□□□□ -0.81
TRAF3-208ENST00000560371 FAM236AA0A1B0GUQ0 79 aa9.99□□□□□ -0.81
TRAF3-208ENST00000560371 FAM236BA0A1B0GV22 79 aa9.99□□□□□ -0.81
TRAF3-208ENST00000560371 CDPF1Q6NVV7 123 aa9.99□□□□□ -0.81
TRAF3-208ENST00000560371 PDE6GP18545 87 aa9.99□□□□□ -0.81
TRAF3-208ENST00000560371 UBE2D3P61077 147 aa9.99□□□□□ -0.81
TRAF3-208ENST00000560371 TEN1Q86WV5 123 aa9.99□□□□□ -0.81
TRAF3-208ENST00000560371 Q8N6K4 173 aa9.99□□□□□ -0.81
TRAF3-208ENST00000560371 M0QY20 66 aa9.99□□□□□ -0.81
TRAF3-208ENST00000560371 IGLV2-8P01709 118 aa9.98□□□□□ -0.81
TRAF3-208ENST00000560371 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
TRAF3-208ENST00000560371 KRTAP10-9P60411 292 aa9.97□□□□□ -0.81
TRAF3-208ENST00000560371 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
TRAF3-208ENST00000560371 MBD6Q96DN6 1003 aa9.97□□□□□ -0.81
TRAF3-208ENST00000560371 XAGE1AQ9HD64 81 aa9.97□□□□□ -0.81
TRAF3-208ENST00000560371 PROK1P58294 105 aa9.97□□□□□ -0.81
TRAF3-208ENST00000560371 SYCNQ0VAF6 134 aa9.97□□□□□ -0.81
TRAF3-208ENST00000560371 CRIP1P50238 77 aa9.97□□□□□ -0.81
TRAF3-208ENST00000560371 IGLV4-3A0A075B6K6 122 aa9.96□□□□□ -0.81
TRAF3-208ENST00000560371 IGLV1-40P01703 118 aa9.96□□□□□ -0.81
TRAF3-208ENST00000560371 A0A0J9YXY3 114 aa9.96□□□□□ -0.81
TRAF3-208ENST00000560371 FAM19A5Q7Z5A7 132 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-208ENST00000560371 ZNF295-AS1Q8N0V1 137 aa9.96□□□□□ -0.82
TRAF3-208ENST00000560371 AVPP01185 164 aa9.96□□□□□ -0.82
TRAF3-208ENST00000560371 PRR15LQ9BU68 103 aa9.95□□□□□ -0.82
TRAF3-208ENST00000560371 TRAV23DV6A0A075B6W5 121 aa9.95□□□□□ -0.82
TRAF3-208ENST00000560371 WFDC2Q14508 124 aa9.95□□□□□ -0.82
TRAF3-208ENST00000560371 IBA57-AS1B1ANH7 110 aa9.95□□□□□ -0.82
TRAF3-208ENST00000560371 H3BT86 120 aa9.95□□□□□ -0.82
TRAF3-208ENST00000560371 RBX1P62877 108 aa9.95□□□□□ -0.82
TRAF3-208ENST00000560371 ATOX1O00244 68 aa9.94□□□□□ -0.82
TRAF3-208ENST00000560371 LELP1Q5T871 98 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms