RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 ORMDL2Q53FV1 153 aa10.85□□□□□ -0.67
LRRC28-217ENST00000560213 ZNF664Q8N3J9 261 aa10.85□□□□□ -0.67
LRRC28-217ENST00000560213 TIMM21Q9BVV7 248 aa10.85□□□□□ -0.67
LRRC28-217ENST00000560213 CDC42SE2Q9NRR3 84 aa10.85□□□□□ -0.67
LRRC28-217ENST00000560213 LRCOL1A6NCL2 159 aa10.84□□□□□ -0.67
LRRC28-217ENST00000560213 MAPKAPK5-AS1Q8N8E1 139 aa10.84□□□□□ -0.67
LRRC28-217ENST00000560213 BAALCQ8WXS3 180 aa10.84□□□□□ -0.67
LRRC28-217ENST00000560213 SPATA12Q7Z6I5 190 aa10.83□□□□□ -0.68
LRRC28-217ENST00000560213 KRTAP3-3Q9BYR6 98 aa10.83□□□□□ -0.68
LRRC28-217ENST00000560213 KRTAP3-2Q9BYR7 98 aa10.83□□□□□ -0.68
LRRC28-217ENST00000560213 SPANXA1Q9NS26 97 aa10.83□□□□□ -0.68
LRRC28-217ENST00000560213 G0S2P27469 103 aa10.82□□□□□ -0.68
LRRC28-217ENST00000560213 CYSLTR1Q9Y271 337 aa10.82□□□□□ -0.68
LRRC28-217ENST00000560213 LECT2O14960 151 aa10.81□□□□□ -0.68
LRRC28-217ENST00000560213 C2orf66Q6UXQ4 117 aa10.81□□□□□ -0.68
LRRC28-217ENST00000560213 FRAS1Q86XX4 4008 aa10.81□□□□□ -0.68
LRRC28-217ENST00000560213 DNAH10Q8IVF4 4471 aa10.81□□□□□ -0.68
LRRC28-217ENST00000560213 SS18Q15532 418 aa10.8□□□□□ -0.68
LRRC28-217ENST00000560213 RNASE13Q5GAN3 156 aaKnown RBP10.8□□□□□ -0.68
LRRC28-217ENST00000560213 KRTAP26-1Q6PEX3 210 aa10.8□□□□□ -0.68
LRRC28-217ENST00000560213 Q6ZUT4 128 aa10.8□□□□□ -0.68
LRRC28-217ENST00000560213 FA2HQ7L5A8 372 aa10.8□□□□□ -0.68
LRRC28-217ENST00000560213 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
LRRC28-217ENST00000560213 COLCA2A8K830 154 aa10.79□□□□□ -0.68
LRRC28-217ENST00000560213 SCO1O75880 301 aa10.79□□□□□ -0.68
LRRC28-217ENST00000560213 KRTAP10-2P60368 255 aa10.79□□□□□ -0.68
LRRC28-217ENST00000560213 WFDC2Q14508 124 aa10.79□□□□□ -0.68
LRRC28-217ENST00000560213 Q8N814 137 aa10.79□□□□□ -0.68
LRRC28-217ENST00000560213 C18orf32Q8TCD1 76 aa10.79□□□□□ -0.68
LRRC28-217ENST00000560213 CHCHD10Q8WYQ3 142 aaPredicted RBP10.79□□□□□ -0.68
LRRC28-217ENST00000560213 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
LRRC28-217ENST00000560213 PGPEP1Q9NXJ5 209 aa10.79□□□□□ -0.68
LRRC28-217ENST00000560213 PYGO1Q9Y3Y4 419 aa10.79□□□□□ -0.68
LRRC28-217ENST00000560213 GAGE12HA6NDE8 117 aa10.78□□□□□ -0.68
LRRC28-217ENST00000560213 LINC01546A6NGU7 62 aa10.78□□□□□ -0.68
LRRC28-217ENST00000560213 MRPS36P82909 103 aaKnown RBP10.78□□□□□ -0.68
LRRC28-217ENST00000560213 DNAH2Q9P225 4427 aa10.77□□□□□ -0.69
LRRC28-217ENST00000560213 DNAH17Q9UFH2 4485 aa10.77□□□□□ -0.69
LRRC28-217ENST00000560213 TRAV13-1A0A0B4J241 112 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 C16orf90A8MZG2 172 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 C1orf196B1AJZ1 125 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 USP17L23D6RBM5 183 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 CCL25O15444 150 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 TRGC2P03986 189 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 LINC00614P0C842 121 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 XCL1P47992 114 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 RAB5BP61020 215 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 C14orf177Q52M58 125 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 FAM104AQ969W3 186 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 AP5S1Q9NUS5 200 aa10.76□□□□□ -0.69
LRRC28-217ENST00000560213 IGLV4-3A0A075B6K6 122 aa10.75□□□□□ -0.69
LRRC28-217ENST00000560213 S100A1P23297 94 aa10.75□□□□□ -0.69
LRRC28-217ENST00000560213 FUSP35637 526 aaKnown RBP eCLIP10.75□□□□□ -0.69
LRRC28-217ENST00000560213 CDPF1Q6NVV7 123 aa10.75□□□□□ -0.69
LRRC28-217ENST00000560213 NTN5Q8WTR8 489 aaPredicted RBP10.75□□□□□ -0.69
LRRC28-217ENST00000560213 TOMM6Q96B49 74 aa10.75□□□□□ -0.69
LRRC28-217ENST00000560213 TMEM141Q96I45 108 aa10.75□□□□□ -0.69
LRRC28-217ENST00000560213 LINC01549A6NIU2 74 aa10.74□□□□□ -0.69
LRRC28-217ENST00000560213 Q6ZN92 141 aa10.74□□□□□ -0.69
LRRC28-217ENST00000560213 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.73□□□□□ -0.69
LRRC28-217ENST00000560213 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
LRRC28-217ENST00000560213 IGIPA6NJ69 53 aa10.73□□□□□ -0.69
LRRC28-217ENST00000560213 IFITM10A6NMD0 228 aa10.73□□□□□ -0.69
LRRC28-217ENST00000560213 NPSP0C0P6 89 aa10.73□□□□□ -0.69
LRRC28-217ENST00000560213 FOXI1Q12951 378 aa10.73□□□□□ -0.69
LRRC28-217ENST00000560213 CD164L2Q6UWJ8 174 aa10.73□□□□□ -0.69
LRRC28-217ENST00000560213 TEX43Q6ZNM6 134 aa10.73□□□□□ -0.69
LRRC28-217ENST00000560213 SCGB3A1Q96QR1 104 aa10.73□□□□□ -0.69
LRRC28-217ENST00000560213 VCX2Q9H322 139 aa10.73□□□□□ -0.69
LRRC28-217ENST00000560213 PAPPA-AS1Q5QFB9 102 aa10.72□□□□□ -0.69
LRRC28-217ENST00000560213 CFAP161Q6P656 301 aa10.72□□□□□ -0.69
LRRC28-217ENST00000560213 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
LRRC28-217ENST00000560213 TIMM17AQ99595 171 aa10.72□□□□□ -0.69
LRRC28-217ENST00000560213 ATP6V1G1O75348 118 aa10.71□□□□□ -0.69
LRRC28-217ENST00000560213 ERASQ7Z444 233 aa10.71□□□□□ -0.69
LRRC28-217ENST00000560213 C2orf88Q9BSF0 95 aa10.71□□□□□ -0.69
LRRC28-217ENST00000560213 PRSS1P07477 247 aa10.7□□□□□ -0.7
LRRC28-217ENST00000560213 BAGE3Q86Y29 109 aa10.7□□□□□ -0.7
LRRC28-217ENST00000560213 hDV102S1A0JD36 115 aa10.69□□□□□ -0.7
LRRC28-217ENST00000560213 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
LRRC28-217ENST00000560213 CHCHD1Q96BP2 118 aaKnown RBP10.69□□□□□ -0.7
LRRC28-217ENST00000560213 AMELXQ99217 191 aa10.69□□□□□ -0.7
LRRC28-217ENST00000560213 FAT2Q9NYQ8 4349 aa10.69□□□□□ -0.7
LRRC28-217ENST00000560213 COX7A2LO14548 114 aa10.68□□□□□ -0.7
LRRC28-217ENST00000560213 HBDP02042 147 aa10.68□□□□□ -0.7
LRRC28-217ENST00000560213 MALP21145 153 aa10.68□□□□□ -0.7
LRRC28-217ENST00000560213 GCSHP23434 173 aa10.68□□□□□ -0.7
LRRC28-217ENST00000560213 PMCHL1Q16048 86 aa10.68□□□□□ -0.7
LRRC28-217ENST00000560213 IGHV1-58A0A0C4DH39 117 aa10.67□□□□□ -0.7
LRRC28-217ENST00000560213 LINC00173Q6ZV60 143 aa10.67□□□□□ -0.7
LRRC28-217ENST00000560213 C5orf38Q86SI9 138 aa10.67□□□□□ -0.7
LRRC28-217ENST00000560213 C15orf56Q8N910 161 aa10.67□□□□□ -0.7
LRRC28-217ENST00000560213 A0A096LNJ9 63 aa10.66□□□□□ -0.7
LRRC28-217ENST00000560213 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.66□□□□□ -0.7
LRRC28-217ENST00000560213 UBE2D1P51668 147 aa10.66□□□□□ -0.7
LRRC28-217ENST00000560213 PKD1P98161 4303 aa10.65□□□□□ -0.7
LRRC28-217ENST00000560213 HIGD2BQ4VC39 106 aa10.65□□□□□ -0.7
LRRC28-217ENST00000560213 LINC00242Q5T6M2 205 aa10.65□□□□□ -0.7
LRRC28-217ENST00000560213 EPPK1P58107 5090 aaKnown RBP10.65□□□□□ -0.7
LRRC28-217ENST00000560213 IGHV3OR16-9A0A0B4J2B5 98 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms