RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 C14orf177Q52M58 125 aa8.07□□□□□ -1.12
RABGGTA-215ENST00000560207 ENHOQ6UWT2 76 aa8.07□□□□□ -1.12
RABGGTA-215ENST00000560207 ZNF664Q8N3J9 261 aa8.07□□□□□ -1.12
RABGGTA-215ENST00000560207 CDC42SE2Q9NRR3 84 aa8.07□□□□□ -1.12
RABGGTA-215ENST00000560207 UBE2D4Q9Y2X8 147 aa8.07□□□□□ -1.12
RABGGTA-215ENST00000560207 RYR3Q15413 4870 aa8.06□□□□□ -1.12
RABGGTA-215ENST00000560207 IGLV4-60A0A075B6I1 120 aa8.06□□□□□ -1.12
RABGGTA-215ENST00000560207 FA2HQ7L5A8 372 aa8.06□□□□□ -1.12
RABGGTA-215ENST00000560207 Q8N3U1 123 aa8.06□□□□□ -1.12
RABGGTA-215ENST00000560207 C1orf196B1AJZ1 125 aa8.05□□□□□ -1.12
RABGGTA-215ENST00000560207 SS18Q15532 418 aa8.05□□□□□ -1.12
RABGGTA-215ENST00000560207 CDPF1Q6NVV7 123 aa8.05□□□□□ -1.12
RABGGTA-215ENST00000560207 DEFB104AQ8WTQ1 72 aa8.05□□□□□ -1.12
RABGGTA-215ENST00000560207 AP5S1Q9NUS5 200 aa8.05□□□□□ -1.12
RABGGTA-215ENST00000560207 LINC00614P0C842 121 aa8.04□□□□□ -1.12
RABGGTA-215ENST00000560207 TNP2Q05952 138 aa8.04□□□□□ -1.12
RABGGTA-215ENST00000560207 C2orf66Q6UXQ4 117 aa8.04□□□□□ -1.12
RABGGTA-215ENST00000560207 Q6ZN92 141 aa8.04□□□□□ -1.12
RABGGTA-215ENST00000560207 NTN5Q8WTR8 489 aaPredicted RBP8.04□□□□□ -1.12
RABGGTA-215ENST00000560207 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
RABGGTA-215ENST00000560207 A0A087WTM6 91 aa8.03□□□□□ -1.12
RABGGTA-215ENST00000560207 COLCA2A8K830 154 aa8.03□□□□□ -1.12
RABGGTA-215ENST00000560207 CFAP161Q6P656 301 aa8.03□□□□□ -1.12
RABGGTA-215ENST00000560207 C18orf32Q8TCD1 76 aa8.03□□□□□ -1.12
RABGGTA-215ENST00000560207 ERASQ7Z444 233 aa8.02□□□□□ -1.13
RABGGTA-215ENST00000560207 TOMM6Q96B49 74 aa8.02□□□□□ -1.13
RABGGTA-215ENST00000560207 CHCHD1Q96BP2 118 aaKnown RBP8.02□□□□□ -1.13
RABGGTA-215ENST00000560207 TMEM141Q96I45 108 aa8.02□□□□□ -1.13
RABGGTA-215ENST00000560207 TIMM17AQ99595 171 aa8.02□□□□□ -1.13
RABGGTA-215ENST00000560207 C2orf88Q9BSF0 95 aa8.02□□□□□ -1.13
RABGGTA-215ENST00000560207 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
RABGGTA-215ENST00000560207 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
RABGGTA-215ENST00000560207 LRCOL1A6NCL2 159 aa8.01□□□□□ -1.13
RABGGTA-215ENST00000560207 RPL39P62891 51 aaKnown RBP8.01□□□□□ -1.13
RABGGTA-215ENST00000560207 SEC11AP67812 179 aa8.01□□□□□ -1.13
RABGGTA-215ENST00000560207 TRGC2P03986 189 aa8□□□□□ -1.13
RABGGTA-215ENST00000560207 CLPSL2Q6UWE3 100 aa8□□□□□ -1.13
RABGGTA-215ENST00000560207 CD164L2Q6UWJ8 174 aa8□□□□□ -1.13
RABGGTA-215ENST00000560207 TEX43Q6ZNM6 134 aa8□□□□□ -1.13
RABGGTA-215ENST00000560207 CHCHD10Q8WYQ3 142 aaPredicted RBP8□□□□□ -1.13
RABGGTA-215ENST00000560207 VCX2Q9H322 139 aa8□□□□□ -1.13
RABGGTA-215ENST00000560207 IGIPA6NJ69 53 aa7.99□□□□□ -1.13
RABGGTA-215ENST00000560207 ATP6V1G1O75348 118 aa7.99□□□□□ -1.13
RABGGTA-215ENST00000560207 HBDP02042 147 aa7.99□□□□□ -1.13
RABGGTA-215ENST00000560207 Q8N814 137 aa7.99□□□□□ -1.13
RABGGTA-215ENST00000560207 SCGB3A1Q96QR1 104 aa7.99□□□□□ -1.13
RABGGTA-215ENST00000560207 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
RABGGTA-215ENST00000560207 IGLV4-3A0A075B6K6 122 aa7.98□□□□□ -1.13
RABGGTA-215ENST00000560207 IGKV3OR2-268A0A0C4DH90 116 aa7.98□□□□□ -1.13
RABGGTA-215ENST00000560207 IFITM10A6NMD0 228 aa7.98□□□□□ -1.13
RABGGTA-215ENST00000560207 KRTAP26-1Q6PEX3 210 aa7.98□□□□□ -1.13
RABGGTA-215ENST00000560207 Q6ZUT4 128 aa7.98□□□□□ -1.13
RABGGTA-215ENST00000560207 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
RABGGTA-215ENST00000560207 GAGE12HA6NDE8 117 aa7.97□□□□□ -1.13
RABGGTA-215ENST00000560207 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.97□□□□□ -1.13
RABGGTA-215ENST00000560207 ATP5LO75964 103 aa7.97□□□□□ -1.13
RABGGTA-215ENST00000560207 APOMO95445 188 aa7.97□□□□□ -1.13
RABGGTA-215ENST00000560207 BAALCQ8WXS3 180 aa7.97□□□□□ -1.13
RABGGTA-215ENST00000560207 AMELXQ99217 191 aa7.97□□□□□ -1.13
RABGGTA-215ENST00000560207 DNAH2Q9P225 4427 aa7.96□□□□□ -1.13
RABGGTA-215ENST00000560207 TRAV13-1A0A0B4J241 112 aa7.96□□□□□ -1.14
RABGGTA-215ENST00000560207 HSBP1O75506 76 aa7.96□□□□□ -1.14
RABGGTA-215ENST00000560207 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.14
RABGGTA-215ENST00000560207 MAPKAPK5-AS1Q8N8E1 139 aa7.96□□□□□ -1.14
RABGGTA-215ENST00000560207 DNAH10Q8IVF4 4471 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 IGHV1-58A0A0C4DH39 117 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 USP17L23D6RBM5 183 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 COX7A2LO14548 114 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 MALP21145 153 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 XCL1P47992 114 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 FOXI1Q12951 378 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 FAM19A3Q7Z5A8 133 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 LINC01561Q8N1V8 128 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 PKIGQ9Y2B9 76 aa7.95□□□□□ -1.14
RABGGTA-215ENST00000560207 FRAS1Q86XX4 4008 aa7.94□□□□□ -1.14
RABGGTA-215ENST00000560207 IGLV5-52A0A0A0MRZ9 124 aa7.94□□□□□ -1.14
RABGGTA-215ENST00000560207 F8WDY8 70 aa7.94□□□□□ -1.14
RABGGTA-215ENST00000560207 SCO1O75880 301 aa7.94□□□□□ -1.14
RABGGTA-215ENST00000560207 HERVK_113P63121 156 aa7.94□□□□□ -1.14
RABGGTA-215ENST00000560207 FAM104AQ969W3 186 aa7.94□□□□□ -1.14
RABGGTA-215ENST00000560207 DNAH17Q9UFH2 4485 aa7.94□□□□□ -1.14
RABGGTA-215ENST00000560207 C16orf90A8MZG2 172 aa7.93□□□□□ -1.14
RABGGTA-215ENST00000560207 PMVKQ15126 192 aa7.93□□□□□ -1.14
RABGGTA-215ENST00000560207 URB1-AS1Q96HZ7 61 aa7.93□□□□□ -1.14
RABGGTA-215ENST00000560207 GVQW2A0A096LPI5 108 aaPredicted RBP7.92□□□□□ -1.14
RABGGTA-215ENST00000560207 IGHV3OR16-9A0A0B4J2B5 98 aa7.92□□□□□ -1.14
RABGGTA-215ENST00000560207 UBE2D1P51668 147 aa7.92□□□□□ -1.14
RABGGTA-215ENST00000560207 PDZD11Q5EBL8 140 aa7.92□□□□□ -1.14
RABGGTA-215ENST00000560207 RNASE13Q5GAN3 156 aaKnown RBP7.92□□□□□ -1.14
RABGGTA-215ENST00000560207 OR10D4PQ8NGN7 298 aa7.92□□□□□ -1.14
RABGGTA-215ENST00000560207 OPRPNQ99935 248 aaPredicted RBP7.92□□□□□ -1.14
RABGGTA-215ENST00000560207 hDV102S1A0JD36 115 aa7.91□□□□□ -1.14
RABGGTA-215ENST00000560207 ZNF561-AS1K7EIQ3 104 aa7.91□□□□□ -1.14
RABGGTA-215ENST00000560207 LECT2O14960 151 aa7.91□□□□□ -1.14
RABGGTA-215ENST00000560207 GCSHP23434 173 aa7.91□□□□□ -1.14
RABGGTA-215ENST00000560207 CNBPP62633 177 aaKnown RBP7.91□□□□□ -1.14
RABGGTA-215ENST00000560207 LINC00242Q5T6M2 205 aa7.91□□□□□ -1.14
RABGGTA-215ENST00000560207 PACRGQ96M98 296 aaPredicted RBP7.91□□□□□ -1.14
RABGGTA-215ENST00000560207 GEMIN7Q9H840 131 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms