RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TSHBP01222 138 aa14.08□□□□□ -0.16
PSEN1-225ENST00000560005 PYY3Q5JQD4 70 aa14.08□□□□□ -0.16
PSEN1-225ENST00000560005 C2orf66Q6UXQ4 117 aa14.08□□□□□ -0.16
PSEN1-225ENST00000560005 SYS1-DBNDD2H3BUS1 97 aa14.07□□□□□ -0.16
PSEN1-225ENST00000560005 CRYBA4P53673 196 aa14.07□□□□□ -0.16
PSEN1-225ENST00000560005 UBE2D3P61077 147 aa14.07□□□□□ -0.16
PSEN1-225ENST00000560005 UBE2D2P62837 147 aa14.07□□□□□ -0.16
PSEN1-225ENST00000560005 SMAGPQ0VAQ4 97 aa14.07□□□□□ -0.16
PSEN1-225ENST00000560005 TTC32Q5I0X7 151 aa14.07□□□□□ -0.16
PSEN1-225ENST00000560005 NEGR1Q7Z3B1 354 aa14.07□□□□□ -0.16
PSEN1-225ENST00000560005 LINC00518Q8N0U6 118 aa14.07□□□□□ -0.16
PSEN1-225ENST00000560005 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.06□□□□□ -0.16
PSEN1-225ENST00000560005 ERASQ7Z444 233 aa14.06□□□□□ -0.16
PSEN1-225ENST00000560005 SCGB3A1Q96QR1 104 aa14.06□□□□□ -0.16
PSEN1-225ENST00000560005 GAGE12JA6NER3 117 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 PAX4O43316 350 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 GAGE1Q13065 139 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 GAGE4Q13068 117 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 GAGE5Q13069 117 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 GAGE13Q4V321 117 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 Q5VSD8 79 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 C20orf203Q8NBC4 194 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 TMEM141Q96I45 108 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 C12orf57Q99622 126 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 GTSF1LQ9H1H1 148 aa14.05□□□□□ -0.16
PSEN1-225ENST00000560005 S100A12P80511 92 aa14.04□□□□□ -0.16
PSEN1-225ENST00000560005 SH2D6Q7Z4S9 175 aa14.04□□□□□ -0.16
PSEN1-225ENST00000560005 NPSP0C0P6 89 aa14.03□□□□□ -0.16
PSEN1-225ENST00000560005 Q6ZN92 141 aa14.03□□□□□ -0.16
PSEN1-225ENST00000560005 PRSS1P07477 247 aa14.02□□□□□ -0.17
PSEN1-225ENST00000560005 XGP55808 180 aa14.02□□□□□ -0.17
PSEN1-225ENST00000560005 PAPPA-AS1Q5QFB9 102 aa14.02□□□□□ -0.17
PSEN1-225ENST00000560005 LINC00173Q6ZV60 143 aa14.02□□□□□ -0.17
PSEN1-225ENST00000560005 TIMM17AQ99595 171 aa14.02□□□□□ -0.17
PSEN1-225ENST00000560005 Q9UF83 564 aa14.02□□□□□ -0.17
PSEN1-225ENST00000560005 GYPEP15421 78 aa14.01□□□□□ -0.17
PSEN1-225ENST00000560005 FUSP35637 526 aaKnown RBP eCLIP14.01□□□□□ -0.17
PSEN1-225ENST00000560005 LINC00694P0DN24 101 aa14□□□□□ -0.17
PSEN1-225ENST00000560005 PYGO1Q9Y3Y4 419 aa14□□□□□ -0.17
PSEN1-225ENST00000560005 H3BNG1 76 aa13.99□□□□□ -0.17
PSEN1-225ENST00000560005 H7C423 109 aa13.99□□□□□ -0.17
PSEN1-225ENST00000560005 LINC01545Q5VT33 79 aa13.99□□□□□ -0.17
PSEN1-225ENST00000560005 ATP6V0E2Q8NHE4 81 aa13.99□□□□□ -0.17
PSEN1-225ENST00000560005 TRAV26-1A0A087WT03 109 aa13.98□□□□□ -0.17
PSEN1-225ENST00000560005 TRAV12-1A0A0B4J245 112 aa13.98□□□□□ -0.17
PSEN1-225ENST00000560005 IGHV3-38A0A0C4DH36 116 aa13.98□□□□□ -0.17
PSEN1-225ENST00000560005 IGIPA6NJ69 53 aa13.98□□□□□ -0.17
PSEN1-225ENST00000560005 MRPL23Q16540 153 aaKnown RBP13.98□□□□□ -0.17
PSEN1-225ENST00000560005 UPK3BQ9BT76 320 aa13.98□□□□□ -0.17
PSEN1-225ENST00000560005 TIMM21Q9BVV7 248 aa13.98□□□□□ -0.17
PSEN1-225ENST00000560005 SPANXA1Q9NS26 97 aa13.98□□□□□ -0.17
PSEN1-225ENST00000560005 TRBV25-1A0A075B6N4 114 aa13.97□□□□□ -0.17
PSEN1-225ENST00000560005 CHCHD7Q9BUK0 85 aa13.97□□□□□ -0.17
PSEN1-225ENST00000560005 PGPEP1Q9NXJ5 209 aa13.97□□□□□ -0.17
PSEN1-225ENST00000560005 LOC100131303A0A0U1RQF7 123 aa13.96□□□□□ -0.17
PSEN1-225ENST00000560005 Q8N976 141 aa13.96□□□□□ -0.17
PSEN1-225ENST00000560005 H0Y8G0 127 aa13.95□□□□□ -0.18
PSEN1-225ENST00000560005 RPL39P62891 51 aaKnown RBP13.95□□□□□ -0.18
PSEN1-225ENST00000560005 ESRGQ1W209 222 aa13.95□□□□□ -0.18
PSEN1-225ENST00000560005 TEX43Q6ZNM6 134 aa13.95□□□□□ -0.18
PSEN1-225ENST00000560005 VSIG2Q96IQ7 327 aa13.95□□□□□ -0.18
PSEN1-225ENST00000560005 TMEM243Q9BU79 118 aa13.95□□□□□ -0.18
PSEN1-225ENST00000560005 ICOSQ9Y6W8 199 aa13.95□□□□□ -0.18
PSEN1-225ENST00000560005 UBR4Q5T4S7 5183 aa13.95□□□□□ -0.18
PSEN1-225ENST00000560005 A0A087WX48 190 aa13.94□□□□□ -0.18
PSEN1-225ENST00000560005 A0A0J9YY99 117 aa13.94□□□□□ -0.18
PSEN1-225ENST00000560005 UBE2L6O14933 153 aa13.94□□□□□ -0.18
PSEN1-225ENST00000560005 Q6ZRN7 208 aaPredicted RBP13.94□□□□□ -0.18
PSEN1-225ENST00000560005 TRBV6-8A0A0A6YYG3 113 aa13.93□□□□□ -0.18
PSEN1-225ENST00000560005 PMVKQ15126 192 aa13.93□□□□□ -0.18
PSEN1-225ENST00000560005 DGAT2L7PQ6IED9 249 aa13.93□□□□□ -0.18
PSEN1-225ENST00000560005 DEFB104AQ8WTQ1 72 aa13.93□□□□□ -0.18
PSEN1-225ENST00000560005 VAMP8Q9BV40 100 aa13.93□□□□□ -0.18
PSEN1-225ENST00000560005 MRPS16Q9Y3D3 137 aaKnown RBP13.93□□□□□ -0.18
PSEN1-225ENST00000560005 CSDC2Q9Y534 153 aaKnown RBP13.93□□□□□ -0.18
PSEN1-225ENST00000560005 HSBP1L1C9JCN9 74 aa13.92□□□□□ -0.18
PSEN1-225ENST00000560005 SMR3BP02814 79 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-225ENST00000560005 MRPL52Q86TS9 123 aaKnown RBP13.92□□□□□ -0.18
PSEN1-225ENST00000560005 BAALCQ8WXS3 180 aa13.92□□□□□ -0.18
PSEN1-225ENST00000560005 VCX2Q9H322 139 aa13.92□□□□□ -0.18
PSEN1-225ENST00000560005 EREGO14944 169 aa13.91□□□□□ -0.18
PSEN1-225ENST00000560005 KRTAP10-1P60331 282 aa13.91□□□□□ -0.18
PSEN1-225ENST00000560005 MRPS36P82909 103 aaKnown RBP13.91□□□□□ -0.18
PSEN1-225ENST00000560005 ODF1Q14990 250 aa13.91□□□□□ -0.18
PSEN1-225ENST00000560005 CDPF1Q6NVV7 123 aa13.91□□□□□ -0.18
PSEN1-225ENST00000560005 NTM-AS1Q6ZSK4 140 aa13.91□□□□□ -0.18
PSEN1-225ENST00000560005 TRAV9-2A0A087WT02 112 aa13.9□□□□□ -0.18
PSEN1-225ENST00000560005 ZNF25P17030 456 aaPredicted RBP13.9□□□□□ -0.18
PSEN1-225ENST00000560005 PLNP26678 52 aa13.9□□□□□ -0.18
PSEN1-225ENST00000560005 PKIAP61925 76 aa13.9□□□□□ -0.18
PSEN1-225ENST00000560005 TMEM101Q96IK0 257 aa13.9□□□□□ -0.18
PSEN1-225ENST00000560005 UBE2D4Q9Y2X8 147 aa13.9□□□□□ -0.18
PSEN1-225ENST00000560005 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-225ENST00000560005 IGKV2-29A2NJV5 120 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-225ENST00000560005 F8VRH5 84 aa13.89□□□□□ -0.19
PSEN1-225ENST00000560005 J3QL48 77 aa13.89□□□□□ -0.19
PSEN1-225ENST00000560005 DPM2O94777 84 aa13.89□□□□□ -0.19
PSEN1-225ENST00000560005 AMMECR1LQ6DCA0 310 aa13.89□□□□□ -0.19
PSEN1-225ENST00000560005 CHTOPQ9Y3Y2 248 aaKnown RBP13.89□□□□□ -0.19
PSEN1-225ENST00000560005 TIRAPP58753 221 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms