RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 NUPR2A6NF83 97 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 IFITM10A6NMD0 228 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 PRSS47A8MTI9 375 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 I3L3M4 83 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 VCYO14598 125 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 IGHV3-30P01768 117 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 IGHV3-33P01772 117 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 IGHV3-30-3P0DP02 117 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 IGHV3-30-5P0DP03 117 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 BTF3P20290 206 aaKnown RBP3.56□□□□□ -1.84
SPG11-220ENST00000559933 SNRPEP62304 92 aaKnown RBP3.56□□□□□ -1.84
SPG11-220ENST00000559933 Q0VG73 95 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 COTL1Q14019 142 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 MRPL23Q16540 153 aaKnown RBP3.56□□□□□ -1.84
SPG11-220ENST00000559933 CLPSL2Q6UWE3 100 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 LYPD5Q6UWN5 251 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 DAZ4Q86SG3 579 aaKnown RBP3.56□□□□□ -1.84
SPG11-220ENST00000559933 Q8N976 141 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 GTSF1LQ9H1H1 148 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 DAZ3Q9NR90 486 aaKnown RBP3.56□□□□□ -1.84
SPG11-220ENST00000559933 LAMTOR2Q9Y2Q5 125 aa3.56□□□□□ -1.84
SPG11-220ENST00000559933 IGLV4-60A0A075B6I1 120 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 TRBV6-8A0A0A6YYG3 113 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 LINC01546A6NGU7 62 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 H3BNG1 76 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 PPP1R17O96001 155 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 LINC00614P0C842 121 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 FABP4P15090 132 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 RPL32P62910 135 aaKnown RBP3.55□□□□□ -1.84
SPG11-220ENST00000559933 LAGE3Q14657 143 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 MPV17L2Q567V2 206 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 CASC10Q5T4H9 136 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 C2orf66Q6UXQ4 117 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 Q6ZUT4 128 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 SPATA12Q7Z6I5 190 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 C15orf53Q8NAA6 179 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 FAM104AQ969W3 186 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 KIR2DL4Q99706 377 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 CHCHD5Q9BSY4 110 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 TMEM243Q9BU79 118 aa3.55□□□□□ -1.84
SPG11-220ENST00000559933 NXT2Q9NPJ8 142 aaKnown RBP3.55□□□□□ -1.84
SPG11-220ENST00000559933 KLK5Q9Y337 293 aaPredicted RBP3.55□□□□□ -1.84
SPG11-220ENST00000559933 TRBV25-1A0A075B6N4 114 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 IGKV3OR2-268A0A0C4DH90 116 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 H0Y8G0 127 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 HSBP1O75506 76 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 FGF6P10767 208 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 ESDP10768 282 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 ODF1Q14990 250 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 LELP1Q5T871 98 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 HIST3H2BBQ8N257 126 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 C20orf203Q8NBC4 194 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 CHCHD1Q96BP2 118 aaKnown RBP3.54□□□□□ -1.84
SPG11-220ENST00000559933 KRTAP1-5Q9BYS1 174 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 UBE2D4Q9Y2X8 147 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 DNAH2Q9P225 4427 aa3.54□□□□□ -1.84
SPG11-220ENST00000559933 KMT2AQ03164 3969 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 IGLV4-3A0A075B6K6 122 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 C5orf52A6NGY3 159 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 TMEM262E9PQX1 116 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 UBE2L6O14933 153 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 HBDP02042 147 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 S100A6P06703 90 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 RBX1P62877 108 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 ORMDL2Q53FV1 153 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 COA6Q5JTJ3 125 aaKnown RBP3.53□□□□□ -1.84
SPG11-220ENST00000559933 UBE2DNLQ8IWF7 75 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 TOMM6Q96B49 74 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 HIST1H2BLQ99880 126 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 PMCHL2Q9BQD1 86 aa3.53□□□□□ -1.84
SPG11-220ENST00000559933 MRPS16Q9Y3D3 137 aaKnown RBP3.53□□□□□ -1.84
SPG11-220ENST00000559933 PRSS29PA6NIE9 313 aa3.52□□□□□ -1.85
SPG11-220ENST00000559933 IGIPA6NJ69 53 aa3.52□□□□□ -1.85
SPG11-220ENST00000559933 M0R2N4 97 aa3.52□□□□□ -1.85
SPG11-220ENST00000559933 LY6G6CO95867 125 aa3.52□□□□□ -1.85
SPG11-220ENST00000559933 NPSP0C0P6 89 aa3.52□□□□□ -1.85
SPG11-220ENST00000559933 AMMECR1LQ6DCA0 310 aa3.52□□□□□ -1.85
SPG11-220ENST00000559933 SH2D6Q7Z4S9 175 aa3.52□□□□□ -1.85
SPG11-220ENST00000559933 SCGB3A1Q96QR1 104 aa3.52□□□□□ -1.85
SPG11-220ENST00000559933 CYSLTR1Q9Y271 337 aa3.52□□□□□ -1.85
SPG11-220ENST00000559933 DNAH6Q9C0G6 4158 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 IGLV10-54A0A075B6I4 117 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 TRAV8-6A0A0B4J262 113 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 LEPROTL1O95214 131 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 ANGP03950 147 aaKnown RBP3.51□□□□□ -1.85
SPG11-220ENST00000559933 S100A2P29034 98 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 CCL18P55774 89 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 TCTAP57738 103 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 TIRAPP58753 221 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 KRTDAPP60985 99 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 LINC00269Q8N2A0 174 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 OR5A1Q8NGJ0 315 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 BAALCQ8WXS3 180 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 Q9HAA7 133 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 KLK12Q9UKR0 248 aa3.51□□□□□ -1.85
SPG11-220ENST00000559933 A0A087WX48 190 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 TRAV13-1A0A0B4J241 112 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 C3orf84H3BNL1 204 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 SIVA1O15304 175 aa3.5□□□□□ -1.85
SPG11-220ENST00000559933 C3orf79P0CE67 100 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms