RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 IGLV4-60A0A075B6I1 120 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST1H2BKO60814 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 CRPP02741 224 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST1H2BJP06899 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST1H2BOP23527 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST1H2BBP33778 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST1H2BDP58876 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST1H2BCP62807 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 REG3AQ06141 175 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST2H2BEQ16778 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.85□□□□□ -1.47
LRRC28-215ENST00000559774 C1orf134Q5TEV5 83 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 ERASQ7Z444 233 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 LINC00269Q8N2A0 174 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 C6orf223Q8N319 242 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST1H2BHQ93079 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 URB1-AS1Q96HZ7 61 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 TMEM141Q96I45 108 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST1H2BNQ99877 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 HIST1H2BMQ99879 126 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 TM2D2Q9BX73 214 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 KRTAP1-5Q9BYS1 174 aa5.85□□□□□ -1.47
LRRC28-215ENST00000559774 IGIPA6NJ69 53 aa5.84□□□□□ -1.47
LRRC28-215ENST00000559774 HBDP02042 147 aa5.84□□□□□ -1.47
LRRC28-215ENST00000559774 RPL39P62891 51 aaKnown RBP5.84□□□□□ -1.47
LRRC28-215ENST00000559774 COA6Q5JTJ3 125 aaKnown RBP5.84□□□□□ -1.47
LRRC28-215ENST00000559774 ENHOQ6UWT2 76 aa5.84□□□□□ -1.47
LRRC28-215ENST00000559774 Q8N3U1 123 aa5.84□□□□□ -1.47
LRRC28-215ENST00000559774 UBE2WQ96B02 151 aa5.84□□□□□ -1.47
LRRC28-215ENST00000559774 M0R2N4 97 aa5.83□□□□□ -1.48
LRRC28-215ENST00000559774 HSBP1O75506 76 aa5.83□□□□□ -1.48
LRRC28-215ENST00000559774 Q6ZN92 141 aa5.83□□□□□ -1.48
LRRC28-215ENST00000559774 LINC00336Q6ZUF6 198 aa5.83□□□□□ -1.48
LRRC28-215ENST00000559774 SCGB3A1Q96QR1 104 aa5.83□□□□□ -1.48
LRRC28-215ENST00000559774 DNAH6Q9C0G6 4158 aa5.83□□□□□ -1.48
LRRC28-215ENST00000559774 IGLV4-3A0A075B6K6 122 aa5.82□□□□□ -1.48
LRRC28-215ENST00000559774 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.82□□□□□ -1.48
LRRC28-215ENST00000559774 SERF1AO75920 110 aa5.82□□□□□ -1.48
LRRC28-215ENST00000559774 ATP5LO75964 103 aa5.82□□□□□ -1.48
LRRC28-215ENST00000559774 PDZD11Q5EBL8 140 aa5.82□□□□□ -1.48
LRRC28-215ENST00000559774 FAM104AQ969W3 186 aa5.82□□□□□ -1.48
LRRC28-215ENST00000559774 PACRGQ96M98 296 aaPredicted RBP5.82□□□□□ -1.48
LRRC28-215ENST00000559774 C1orf43Q9BWL3 253 aa5.82□□□□□ -1.48
LRRC28-215ENST00000559774 VCX2Q9H322 139 aa5.82□□□□□ -1.48
LRRC28-215ENST00000559774 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
LRRC28-215ENST00000559774 A0A096LNJ9 63 aa5.81□□□□□ -1.48
LRRC28-215ENST00000559774 LINC00959A0A1B0GUT2 108 aa5.81□□□□□ -1.48
LRRC28-215ENST00000559774 SEC11AP67812 179 aa5.81□□□□□ -1.48
LRRC28-215ENST00000559774 SS18Q15532 418 aa5.81□□□□□ -1.48
LRRC28-215ENST00000559774 TEX43Q6ZNM6 134 aa5.81□□□□□ -1.48
LRRC28-215ENST00000559774 Q6ZRN7 208 aaPredicted RBP5.81□□□□□ -1.48
LRRC28-215ENST00000559774 AMELXQ99217 191 aa5.81□□□□□ -1.48
LRRC28-215ENST00000559774 C2orf88Q9BSF0 95 aa5.81□□□□□ -1.48
LRRC28-215ENST00000559774 RYR2Q92736 4967 aa5.8□□□□□ -1.48
LRRC28-215ENST00000559774 IGKV2D-24A0A075B6R9 120 aa5.8□□□□□ -1.48
LRRC28-215ENST00000559774 LINC00310P59036 64 aa5.8□□□□□ -1.48
LRRC28-215ENST00000559774 Q6ZUT4 128 aa5.8□□□□□ -1.48
LRRC28-215ENST00000559774 FAM19A3Q7Z5A8 133 aa5.8□□□□□ -1.48
LRRC28-215ENST00000559774 Q9HAA7 133 aa5.8□□□□□ -1.48
LRRC28-215ENST00000559774 HSPB8Q9UJY1 196 aa5.8□□□□□ -1.48
LRRC28-215ENST00000559774 IFITM10A6NMD0 228 aa5.79□□□□□ -1.48
LRRC28-215ENST00000559774 RTL8CO15255 209 aa5.79□□□□□ -1.48
LRRC28-215ENST00000559774 PSCAO43653 123 aa5.79□□□□□ -1.48
LRRC28-215ENST00000559774 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
LRRC28-215ENST00000559774 CD164L2Q6UWJ8 174 aa5.79□□□□□ -1.48
LRRC28-215ENST00000559774 CHCHD10Q8WYQ3 142 aaPredicted RBP5.79□□□□□ -1.48
LRRC28-215ENST00000559774 LEPROTL1O95214 131 aa5.78□□□□□ -1.48
LRRC28-215ENST00000559774 UBE2D1P51668 147 aa5.78□□□□□ -1.48
LRRC28-215ENST00000559774 PMVKQ15126 192 aa5.78□□□□□ -1.48
LRRC28-215ENST00000559774 PMCHL1Q16048 86 aa5.78□□□□□ -1.48
LRRC28-215ENST00000559774 LINC00173Q6ZV60 143 aa5.78□□□□□ -1.48
LRRC28-215ENST00000559774 BAALCQ8WXS3 180 aa5.78□□□□□ -1.48
LRRC28-215ENST00000559774 OPRPNQ99935 248 aaPredicted RBP5.78□□□□□ -1.48
LRRC28-215ENST00000559774 CST9LQ9H4G1 147 aa5.78□□□□□ -1.48
LRRC28-215ENST00000559774 DNAH2Q9P225 4427 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 HYDINQ4G0P3 5121 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 TRAV13-1A0A0B4J241 112 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 TRAV12-1A0A0B4J245 112 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 EREGO14944 169 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 NUPR1O60356 82 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 NDUFA6P56556 154 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 C14orf177Q52M58 125 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 CFAP161Q6P656 301 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 CLPSL2Q6UWE3 100 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 LINC01561Q8N1V8 128 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 FAM19A2Q8N3H0 131 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 IFI27L1Q96BM0 104 aa5.77□□□□□ -1.49
LRRC28-215ENST00000559774 RYR3Q15413 4870 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 IGLV10-54A0A075B6I4 117 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 IGHV3OR16-9A0A0B4J2B5 98 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 IGKV3OR2-268A0A0C4DH90 116 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 TINCRA0A1B0GVN0 87 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 S100A6P06703 90 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 PRSS1P07477 247 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 HERVK_113P63121 156 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 FOXI1Q12951 378 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 RNASE13Q5GAN3 156 aaKnown RBP5.76□□□□□ -1.49
LRRC28-215ENST00000559774 LINC00242Q5T6M2 205 aa5.76□□□□□ -1.49
LRRC28-215ENST00000559774 A0A087WTM6 91 aa5.75□□□□□ -1.49
LRRC28-215ENST00000559774 LRCOL1A6NCL2 159 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms