RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 C1orf43Q9BWL3 253 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 MAP1LC3CQ9BXW4 147 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 TMEM191AQ9H0A3 160 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 ST20Q9HBF5 79 aa3.87□□□□□ -1.79
USP3-215ENST00000559771 LRP1Q07954 4544 aaKnown RBP3.86□□□□□ -1.79
USP3-215ENST00000559771 TRGV4A0A0C4DH28 118 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 IGHV3-16A0A0C4DH30 117 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 LINC01546A6NGU7 62 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 HSBP1L1C9JCN9 74 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 SYS1-DBNDD2H3BUS1 97 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 K7EP13 123 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 GNRH2O43555 120 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 ARMS2P0C7Q2 107 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 NTF3P20783 257 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 CACNG7P62955 275 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 WFDC2Q14508 124 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 TDRG1Q3Y452 100 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 LYZL1Q6UWQ5 148 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 Q6ZSN1 163 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 FA2HQ7L5A8 372 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 SMIM15Q7Z3B0 74 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 PRSS3P2Q8NHM4 247 aa3.86□□□□□ -1.79
USP3-215ENST00000559771 TRAV4A0A0B4J268 109 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 IGHV1-24A0A0C4DH33 117 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 PRSS47A8MTI9 375 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 K7EMI3 77 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 PPP1R17O96001 155 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 ORM1P02763 201 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 CRYGDP07320 174 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 IGLC3P0DOY3 106 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 GATA1P15976 413 aaPredicted RBP3.85□□□□□ -1.79
USP3-215ENST00000559771 TIRAPP58753 221 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 TWIST1Q15672 202 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 SPATA45Q537H7 98 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 FAM19A2Q8N3H0 131 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 URB1-AS1Q96HZ7 61 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 PRELID3AQ96N28 172 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 SPXQ9BT56 116 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 NXT2Q9NPJ8 142 aaKnown RBP3.85□□□□□ -1.79
USP3-215ENST00000559771 PAM16Q9Y3D7 125 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
USP3-215ENST00000559771 IGLV5-52A0A0A0MRZ9 124 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 TRAV21A0A0B4J279 112 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 LINC01549A6NIU2 74 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 IBA57-AS1B1ANH7 110 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 SNAI2O43623 268 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 EVI2AP22794 236 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 CKS2P33552 79 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 ZNF80P51504 273 aaPredicted RBP3.84□□□□□ -1.79
USP3-215ENST00000559771 KRTAP10-4P60372 401 aaPredicted RBP3.84□□□□□ -1.79
USP3-215ENST00000559771 LINC01556Q5JQF7 62 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 COL5A1-AS1Q5SY13 56 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 LINC01545Q5VT33 79 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 Q6ZSA8 131 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 LINC00469Q8N7U9 141 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 Q8N814 137 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 SLC25A29Q8N8R3 303 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 SNHG12Q9BXW3 62 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 MAP1LC3AQ9H492 121 aa3.84□□□□□ -1.79
USP3-215ENST00000559771 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.8
USP3-215ENST00000559771 TRGV11A0A075B6L2 103 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 IGHV3-38A0A0C4DH36 116 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 B5MCH6 92 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 D6R8Y8 96 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 M0R2P5 195 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 HBDP02042 147 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 G0S2P27469 103 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 HNRNPA3P51991 378 aaKnown RBP3.83□□□□□ -1.8
USP3-215ENST00000559771 GAGE1Q13065 139 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 MRPL51Q4U2R6 128 aaKnown RBP3.83□□□□□ -1.8
USP3-215ENST00000559771 CFAP126Q5VTH2 177 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 FAM159AQ6UWV7 190 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 Q6ZN92 141 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 C10orf126Q8N4M7 172 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 OR4C5Q8NGB2 326 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 MRAP2Q96G30 205 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 TPPP3Q9BW30 176 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 Q9UF83 564 aa3.83□□□□□ -1.8
USP3-215ENST00000559771 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 PKHD1L1Q86WI1 4243 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 IGKV3D-20A0A0C4DH25 116 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 RS1O15537 224 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 DLEU1O43261 78 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 ATP5LO75964 103 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 IGHV3-30P01768 117 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 IGHV3-33P01772 117 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 LINC00694P0DN24 101 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 IGHV3-30-3P0DP02 117 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 IGHV3-30-5P0DP03 117 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 RNASE3P12724 160 aaKnown RBP3.82□□□□□ -1.8
USP3-215ENST00000559771 FCER1GP30273 86 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 IFI27P40305 119 aaPredicted RBP3.82□□□□□ -1.8
USP3-215ENST00000559771 AMN1Q8IY45 258 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 RNF185Q96GF1 192 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 C9orf85Q96MD7 179 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 C20orf78Q9BR46 151 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 Q9HAA7 133 aa3.82□□□□□ -1.8
USP3-215ENST00000559771 TMSB15BA0A087X1C1 80 aa3.81□□□□□ -1.8
USP3-215ENST00000559771 IGHV3-73A0A0B4J1V6 119 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms