RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 LECT2O14960 151 aa7.2□□□□□ -1.26
TPM1-217ENST00000559108 RAB5AP20339 215 aa7.2□□□□□ -1.26
TPM1-217ENST00000559108 LINC00310P59036 64 aa7.2□□□□□ -1.26
TPM1-217ENST00000559108 PKIAP61925 76 aa7.2□□□□□ -1.26
TPM1-217ENST00000559108 ZC2HC1BQ5TFG8 222 aa7.2□□□□□ -1.26
TPM1-217ENST00000559108 AMMECR1LQ6DCA0 310 aa7.2□□□□□ -1.26
TPM1-217ENST00000559108 LINC00336Q6ZUF6 198 aa7.2□□□□□ -1.26
TPM1-217ENST00000559108 IGKV2D-24A0A075B6R9 120 aa7.19□□□□□ -1.26
TPM1-217ENST00000559108 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
TPM1-217ENST00000559108 ZNF25P17030 456 aaPredicted RBP7.19□□□□□ -1.26
TPM1-217ENST00000559108 LINC00173Q6ZV60 143 aa7.19□□□□□ -1.26
TPM1-217ENST00000559108 NFE4Q86UQ8 179 aa7.19□□□□□ -1.26
TPM1-217ENST00000559108 ZNF664Q8N3J9 261 aa7.19□□□□□ -1.26
TPM1-217ENST00000559108 OR5A1Q8NGJ0 315 aa7.19□□□□□ -1.26
TPM1-217ENST00000559108 BAALCQ8WXS3 180 aa7.19□□□□□ -1.26
TPM1-217ENST00000559108 TIMM21Q9BVV7 248 aa7.19□□□□□ -1.26
TPM1-217ENST00000559108 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
TPM1-217ENST00000559108 DNAH5Q8TE73 4624 aa7.19□□□□□ -1.26
TPM1-217ENST00000559108 PKHD1P08F94 4074 aa7.18□□□□□ -1.26
TPM1-217ENST00000559108 CRPP02741 224 aa7.18□□□□□ -1.26
TPM1-217ENST00000559108 PMCHL1Q16048 86 aa7.18□□□□□ -1.26
TPM1-217ENST00000559108 MIAQ16674 131 aa7.18□□□□□ -1.26
TPM1-217ENST00000559108 C2orf66Q6UXQ4 117 aa7.18□□□□□ -1.26
TPM1-217ENST00000559108 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
TPM1-217ENST00000559108 DYNC1H1Q14204 4646 aaKnown RBP7.17□□□□□ -1.26
TPM1-217ENST00000559108 IGLV4-3A0A075B6K6 122 aa7.17□□□□□ -1.26
TPM1-217ENST00000559108 IGIPA6NJ69 53 aa7.17□□□□□ -1.26
TPM1-217ENST00000559108 Q0VG73 95 aa7.17□□□□□ -1.26
TPM1-217ENST00000559108 PRSS3P2Q8NHM4 247 aa7.17□□□□□ -1.26
TPM1-217ENST00000559108 LINC00959A0A1B0GUT2 108 aa7.16□□□□□ -1.26
TPM1-217ENST00000559108 NUPR1O60356 82 aa7.16□□□□□ -1.26
TPM1-217ENST00000559108 NTN5Q8WTR8 489 aaPredicted RBP7.16□□□□□ -1.26
TPM1-217ENST00000559108 CHCHD10Q8WYQ3 142 aaPredicted RBP7.16□□□□□ -1.26
TPM1-217ENST00000559108 C1orf43Q9BWL3 253 aa7.16□□□□□ -1.26
TPM1-217ENST00000559108 SPANXA1Q9NS26 97 aa7.16□□□□□ -1.26
TPM1-217ENST00000559108 GAGE12HA6NDE8 117 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 K7EMI3 77 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 S100A1P23297 94 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 MRPS36P82909 103 aaKnown RBP7.15□□□□□ -1.26
TPM1-217ENST00000559108 FOXI1Q12951 378 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 ORMDL2Q53FV1 153 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 SPATA12Q7Z6I5 190 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 TOMM6Q96B49 74 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 TMEM101Q96IK0 257 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 CYSLTR1Q9Y271 337 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 PYGO1Q9Y3Y4 419 aa7.15□□□□□ -1.26
TPM1-217ENST00000559108 CCL25O15444 150 aa7.14□□□□□ -1.27
TPM1-217ENST00000559108 PSCAO43653 123 aa7.14□□□□□ -1.27
TPM1-217ENST00000559108 XCL1P47992 114 aa7.14□□□□□ -1.27
TPM1-217ENST00000559108 DGAT2L7PQ6IED9 249 aa7.14□□□□□ -1.27
TPM1-217ENST00000559108 FA2HQ7L5A8 372 aa7.14□□□□□ -1.27
TPM1-217ENST00000559108 Q8N814 137 aa7.14□□□□□ -1.27
TPM1-217ENST00000559108 C15orf56Q8N910 161 aa7.14□□□□□ -1.27
TPM1-217ENST00000559108 TM2D2Q9BX73 214 aa7.14□□□□□ -1.27
TPM1-217ENST00000559108 TRAV13-1A0A0B4J241 112 aa7.13□□□□□ -1.27
TPM1-217ENST00000559108 TRAV8-4A0A0B4J246 113 aa7.13□□□□□ -1.27
TPM1-217ENST00000559108 USP17L23D6RBM5 183 aa7.13□□□□□ -1.27
TPM1-217ENST00000559108 LINC00614P0C842 121 aa7.13□□□□□ -1.27
TPM1-217ENST00000559108 TMEM18Q96B42 140 aa7.13□□□□□ -1.27
TPM1-217ENST00000559108 RMI2Q96E14 147 aa7.13□□□□□ -1.27
TPM1-217ENST00000559108 AMELXQ99217 191 aa7.13□□□□□ -1.27
TPM1-217ENST00000559108 AP5S1Q9NUS5 200 aa7.13□□□□□ -1.27
TPM1-217ENST00000559108 BIRC6Q9NR09 4857 aa7.13□□□□□ -1.27
TPM1-217ENST00000559108 HIST1H2BKO60814 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST1H2BJP06899 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 PRSS1P07477 247 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST1H2BOP23527 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST1H2BBP33778 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST1H2BDP58876 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST1H2BCP62807 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST2H2BEQ16778 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 PDZD11Q5EBL8 140 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST1H2BHQ93079 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST1H2BNQ99877 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 HIST1H2BMQ99879 126 aa7.12□□□□□ -1.27
TPM1-217ENST00000559108 LRP1BQ9NZR2 4599 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.11□□□□□ -1.27
TPM1-217ENST00000559108 IFITM10A6NMD0 228 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 SERF1AO75920 110 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 SLPIP03973 132 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 COX6A2Q02221 97 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 LINC01620Q4KN68 170 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 LINC00242Q5T6M2 205 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 FAM19A2Q8N3H0 131 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 TIMM17AQ99595 171 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 COX11Q9Y6N1 276 aa7.11□□□□□ -1.27
TPM1-217ENST00000559108 UBE2D1P51668 147 aa7.1□□□□□ -1.27
TPM1-217ENST00000559108 ERASQ7Z444 233 aa7.1□□□□□ -1.27
TPM1-217ENST00000559108 SCGB3A1Q96QR1 104 aa7.1□□□□□ -1.27
TPM1-217ENST00000559108 IGHV3OR16-9A0A0B4J2B5 98 aa7.09□□□□□ -1.27
TPM1-217ENST00000559108 HBDP02042 147 aa7.09□□□□□ -1.27
TPM1-217ENST00000559108 KRTAP10-1P60331 282 aa7.09□□□□□ -1.27
TPM1-217ENST00000559108 SS18Q15532 418 aa7.09□□□□□ -1.27
TPM1-217ENST00000559108 CD164L2Q6UWJ8 174 aa7.09□□□□□ -1.27
TPM1-217ENST00000559108 CHCHD1Q96BP2 118 aaKnown RBP7.09□□□□□ -1.27
TPM1-217ENST00000559108 LINC00526Q96FQ7 95 aa7.09□□□□□ -1.27
TPM1-217ENST00000559108 KRTAP17-1Q9BYP8 105 aa7.09□□□□□ -1.27
TPM1-217ENST00000559108 SMAGPQ0VAQ4 97 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms