RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 K7EMT4 169 aa10.43□□□□□ -0.74
SPG11-210ENST00000558319 Q8N976 141 aa10.43□□□□□ -0.74
SPG11-210ENST00000558319 PMAIP1Q13794 54 aa10.43□□□□□ -0.74
SPG11-210ENST00000558319 C9orf85Q96MD7 179 aa10.43□□□□□ -0.74
SPG11-210ENST00000558319 ATP5EP56381 51 aaPredicted RBP10.43□□□□□ -0.74
SPG11-210ENST00000558319 MBD6Q96DN6 1003 aa10.42□□□□□ -0.74
SPG11-210ENST00000558319 TRBV6-5A0A0K0K1A5 114 aa10.42□□□□□ -0.74
SPG11-210ENST00000558319 NDUFC1O43677 76 aa10.42□□□□□ -0.74
SPG11-210ENST00000558319 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.42□□□□□ -0.74
SPG11-210ENST00000558319 IGFL2Q6UWQ7 119 aa10.42□□□□□ -0.74
SPG11-210ENST00000558319 CRIP1P50238 77 aa10.42□□□□□ -0.74
SPG11-210ENST00000558319 CFAP126Q5VTH2 177 aa10.42□□□□□ -0.74
SPG11-210ENST00000558319 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
SPG11-210ENST00000558319 LRRC75A-AS1Q8N1F1 130 aa10.42□□□□□ -0.74
SPG11-210ENST00000558319 CELA1Q9UNI1 258 aa10.41□□□□□ -0.74
SPG11-210ENST00000558319 PLXNB3Q9ULL4 1909 aa10.41□□□□□ -0.74
SPG11-210ENST00000558319 UBE2D4Q9Y2X8 147 aa10.41□□□□□ -0.74
SPG11-210ENST00000558319 UBE2D1P51668 147 aa10.41□□□□□ -0.74
SPG11-210ENST00000558319 NUP210Q8TEM1 1887 aaPredicted RBP10.41□□□□□ -0.74
SPG11-210ENST00000558319 BBC3Q96PG8 261 aaPredicted RBP10.41□□□□□ -0.74
SPG11-210ENST00000558319 HILS1P60008 231 aa10.4□□□□□ -0.74
SPG11-210ENST00000558319 PCDH15Q96QU1 1955 aa10.4□□□□□ -0.74
SPG11-210ENST00000558319 H7C423 109 aa10.4□□□□□ -0.74
SPG11-210ENST00000558319 Q6ZS46 218 aa10.4□□□□□ -0.74
SPG11-210ENST00000558319 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
SPG11-210ENST00000558319 SPRY4Q9C004 299 aa10.4□□□□□ -0.74
SPG11-210ENST00000558319 TMEM131Q92545 1883 aa10.4□□□□□ -0.74
SPG11-210ENST00000558319 MED12LQ86YW9 2145 aa10.4□□□□□ -0.74
SPG11-210ENST00000558319 IGF2-ASQ6U949 168 aa10.39□□□□□ -0.75
SPG11-210ENST00000558319 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
SPG11-210ENST00000558319 SERP1Q9Y6X1 66 aa10.39□□□□□ -0.75
SPG11-210ENST00000558319 SMIM9A6NGZ8 99 aa10.38□□□□□ -0.75
SPG11-210ENST00000558319 IGLV1-47P01700 117 aa10.38□□□□□ -0.75
SPG11-210ENST00000558319 Q6ZQY7 126 aa10.38□□□□□ -0.75
SPG11-210ENST00000558319 Q6ZSR3 168 aa10.38□□□□□ -0.75
SPG11-210ENST00000558319 ZNF843Q8N446 348 aa10.37□□□□□ -0.75
SPG11-210ENST00000558319 IBA57-AS1B1ANH7 110 aa10.37□□□□□ -0.75
SPG11-210ENST00000558319 Q8N9L7 120 aa10.37□□□□□ -0.75
SPG11-210ENST00000558319 YPEL4Q96NS1 127 aa10.37□□□□□ -0.75
SPG11-210ENST00000558319 IMUPQ9GZP8 106 aa10.37□□□□□ -0.75
SPG11-210ENST00000558319 MIFP14174 115 aa10.36□□□□□ -0.75
SPG11-210ENST00000558319 OXLD1Q5BKU9 147 aa10.36□□□□□ -0.75
SPG11-210ENST00000558319 EBI3Q14213 229 aa10.36□□□□□ -0.75
SPG11-210ENST00000558319 ZNF295-AS1Q8N0V1 137 aa10.36□□□□□ -0.75
SPG11-210ENST00000558319 PRORYQ9H606 182 aa10.36□□□□□ -0.75
SPG11-210ENST00000558319 PSPHP1O15172 72 aa10.36□□□□□ -0.75
SPG11-210ENST00000558319 DAZAP2Q15038 168 aaPredicted RBP10.36□□□□□ -0.75
SPG11-210ENST00000558319 CACNA1HO95180 2353 aa10.36□□□□□ -0.75
SPG11-210ENST00000558319 ZFHX2Q9C0A1 2572 aaPredicted RBP10.36□□□□□ -0.75
SPG11-210ENST00000558319 Q6YL49 198 aa10.36□□□□□ -0.75
SPG11-210ENST00000558319 A0A087WVE0 104 aa10.35□□□□□ -0.75
SPG11-210ENST00000558319 SMIM26A0A096LP01 95 aa10.35□□□□□ -0.75
SPG11-210ENST00000558319 LST1O00453 97 aa10.35□□□□□ -0.75
SPG11-210ENST00000558319 EDN2P20800 178 aa10.35□□□□□ -0.75
SPG11-210ENST00000558319 UBE2D3P61077 147 aa10.35□□□□□ -0.75
SPG11-210ENST00000558319 DEFB114Q30KQ6 69 aa10.35□□□□□ -0.75
SPG11-210ENST00000558319 M0QY20 66 aa10.34□□□□□ -0.75
SPG11-210ENST00000558319 BRWD1-AS2P59051 145 aa10.34□□□□□ -0.75
SPG11-210ENST00000558319 LMO4P61968 165 aa10.34□□□□□ -0.75
SPG11-210ENST00000558319 U3KQK5 164 aa10.34□□□□□ -0.75
SPG11-210ENST00000558319 Q6ZSV7 163 aa10.34□□□□□ -0.75
SPG11-210ENST00000558319 LOC107984640A0A0U1RRK4 108 aa10.33□□□□□ -0.76
SPG11-210ENST00000558319 Q6ZPA2 131 aa10.33□□□□□ -0.76
SPG11-210ENST00000558319 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
SPG11-210ENST00000558319 X6R8D5 127 aa10.33□□□□□ -0.76
SPG11-210ENST00000558319 P0C879 139 aa10.32□□□□□ -0.76
SPG11-210ENST00000558319 TRBV6-8A0A0A6YYG3 113 aa10.31□□□□□ -0.76
SPG11-210ENST00000558319 PLXNB1O43157 2135 aa10.31□□□□□ -0.76
SPG11-210ENST00000558319 CRIP2P52943 208 aaPredicted RBP10.31□□□□□ -0.76
SPG11-210ENST00000558319 FREM1Q5H8C1 2179 aa10.31□□□□□ -0.76
SPG11-210ENST00000558319 LY6LH3BQJ8 138 aa10.3□□□□□ -0.76
SPG11-210ENST00000558319 KIAA1549LQ6ZVL6 1849 aa10.3□□□□□ -0.76
SPG11-210ENST00000558319 NUP210LQ5VU65 1888 aa10.3□□□□□ -0.76
SPG11-210ENST00000558319 WNK1Q9H4A3 2382 aa10.3□□□□□ -0.76
SPG11-210ENST00000558319 BRI3O95415 125 aa10.29□□□□□ -0.76
SPG11-210ENST00000558319 TSHBP01222 138 aa10.29□□□□□ -0.76
SPG11-210ENST00000558319 NRACQ8N912 160 aa10.29□□□□□ -0.76
SPG11-210ENST00000558319 C7orf33Q8WU49 177 aa10.29□□□□□ -0.76
SPG11-210ENST00000558319 PTPRQQ9UMZ3 2332 aa10.29□□□□□ -0.76
SPG11-210ENST00000558319 Q6JHZ5 121 aa10.29□□□□□ -0.76
SPG11-210ENST00000558319 IGLV2-11P01706 119 aa10.29□□□□□ -0.76
SPG11-210ENST00000558319 C14orf177Q52M58 125 aa10.29□□□□□ -0.76
SPG11-210ENST00000558319 TNFRSF13BO14836 293 aaPredicted RBP10.28□□□□□ -0.76
SPG11-210ENST00000558319 BEAN1Q3B7T3 259 aa10.28□□□□□ -0.76
SPG11-210ENST00000558319 KPRPQ5T749 579 aaPredicted RBP10.27□□□□□ -0.76
SPG11-210ENST00000558319 LINC00208Q96KT6 92 aa10.27□□□□□ -0.77
SPG11-210ENST00000558319 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.77
SPG11-210ENST00000558319 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
SPG11-210ENST00000558319 TRAV7A0A075B6U4 112 aa10.26□□□□□ -0.77
SPG11-210ENST00000558319 ODF3BA8MYP8 253 aa10.26□□□□□ -0.77
SPG11-210ENST00000558319 SYCNQ0VAF6 134 aa10.26□□□□□ -0.77
SPG11-210ENST00000558319 HCFC1P51610 2035 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 PCNX3Q9H6A9 2034 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 K7EQG2 157 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 IL17DQ8TAD2 202 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 CDSNQ15517 529 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 PRR14LQ5THK1 2151 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 LYRM9A8MSI8 78 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 UBE2D2P62837 147 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 KIR2DL5BQ8NHK3 375 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms