RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 NAA38Q9BRA0 125 aaKnown RBP4.85□□□□□ -1.63
SPTLC2-206ENST00000557566 SLC50A1Q9BRV3 221 aa4.85□□□□□ -1.63
SPTLC2-206ENST00000557566 C1QTNF4Q9BXJ3 329 aa4.85□□□□□ -1.63
SPTLC2-206ENST00000557566 IGLV11-55A0A075B6I3 123 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 TRBV20-1A0A075B6N2 111 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 IGHV4-28A0A0C4DH34 117 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 MYMXA0A1B0GTQ4 84 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 M0R3E3 92 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 MIFP14174 115 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 CRYBA4P53673 196 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 C15orf32Q32M92 178 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 ETDBQ3ZM63 59 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 ORMDL2Q53FV1 153 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 CFAP126Q5VTH2 177 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 APRG1Q8IVJ8 170 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 C6orf223Q8N319 242 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 LINC01600Q96MT4 127 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 C17orf77Q96MU5 243 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 HIST1H4GQ99525 98 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 C20orf78Q9BR46 151 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 TPPP3Q9BW30 176 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 LENEPQ9Y5L5 61 aa4.84□□□□□ -1.63
SPTLC2-206ENST00000557566 TMEM262E9PQX1 116 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 SMKR1H3BMG3 65 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 K7ERJ3 54 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 M0R381 172 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 PPP1R17O96001 155 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 UBE2D1P51668 147 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 UBE2D3P61077 147 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 UBE2D2P62837 147 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 RPL32P62910 135 aaKnown RBP4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 PAPPA-AS1Q5QFB9 102 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 MORN3Q6PF18 240 aaPredicted RBP4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 NRACQ8N912 160 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 GLMPQ8WWB7 406 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 PPDPFLQ8WWR9 84 aa4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 MRPL35Q9NZE8 188 aaKnown RBP4.83□□□□□ -1.64
SPTLC2-206ENST00000557566 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 IGHV3-21A0A0B4J1V1 117 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 APOMO95445 188 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 TSPAN13O95857 204 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 ZNF80P51504 273 aaPredicted RBP4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 CMC4P56277 68 aaPredicted RBP4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 CLEC19AQ6UXS0 136 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 TEN1Q86WV5 123 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 TOMM6Q96B49 74 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 GEMIN7Q9H840 131 aaKnown RBP4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 C11orf21Q9P2W6 132 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 UFC1Q9Y3C8 167 aa4.82□□□□□ -1.64
SPTLC2-206ENST00000557566 IGKV2-40A0A087WW87 121 aaPredicted RBP4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 TMSB15BA0A087X1C1 80 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 IGKV2D-40P01614 121 aaPredicted RBP4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 IGHV3-23P01764 117 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 ORM1P02763 201 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 ERCC8Q13216 396 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 UNQ9165/PRO28630Q6UXU0 137 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 C9orf47Q6ZRZ4 202 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 SH2D6Q7Z4S9 175 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 NEXN-AS1Q8NBZ9 246 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 SMIM2Q9BVW6 85 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 C21orf62Q9NYP8 219 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 CELA1Q9UNI1 258 aa4.81□□□□□ -1.64
SPTLC2-206ENST00000557566 TRBV7-9A0A0J9YWB2 115 aa4.8□□□□□ -1.64
SPTLC2-206ENST00000557566 NBDYA0A0U1RRE5 68 aa4.8□□□□□ -1.64
SPTLC2-206ENST00000557566 CLEC3BP05452 202 aa4.8□□□□□ -1.64
SPTLC2-206ENST00000557566 ASIPP42127 132 aa4.8□□□□□ -1.64
SPTLC2-206ENST00000557566 FXYD7P58549 80 aa4.8□□□□□ -1.64
SPTLC2-206ENST00000557566 Q6Q795 121 aa4.8□□□□□ -1.64
SPTLC2-206ENST00000557566 Q6ZUT4 128 aa4.8□□□□□ -1.64
SPTLC2-206ENST00000557566 EEF1AKMT3Q96AZ1 226 aa4.8□□□□□ -1.64
SPTLC2-206ENST00000557566 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
SPTLC2-206ENST00000557566 TRAV26-1A0A087WT03 109 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 IGKV3D-20A0A0C4DH25 116 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 IGHV7-4-1A0A0J9YVY3 117 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 KRTAP29-1A8MX34 341 aaPredicted RBP4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 SPINK8P0C7L1 97 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 XGP55808 180 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 HERVK_113P61574 105 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 TMEM78Q5T7P6 136 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 TTTY13Q9BZ97 58 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 DAZ1Q9NQZ3 744 aaKnown RBP4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 MSRB1Q9NZV6 116 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 S4R3C0 116 aa4.79□□□□□ -1.64
SPTLC2-206ENST00000557566 TRBV7-1A0A0A6YYK4 115 aa4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 A8MWV9 139 aa4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 CTSGP08311 255 aa4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 ZNF688P0C7X2 276 aa4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 MRPL23Q16540 153 aaKnown RBP4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 AMTNQ6UX39 209 aa4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 TMEM141Q96I45 108 aa4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 SCGB3A1Q96QR1 104 aa4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 SPANXDQ9BXN6 97 aa4.78□□□□□ -1.64
SPTLC2-206ENST00000557566 IGHV3-35A0A0C4DH35 117 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 C11orf86A6NJI1 115 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 BUB3O43684 328 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 GAS8-AS1O95177 125 aa4.77□□□□□ -1.65
SPTLC2-206ENST00000557566 SMR3BP02814 79 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms