RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 D6R8Y8 96 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 PHOX2AO14813 284 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 LECT2O14960 151 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 FGF6P10767 208 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 RAB5AP20339 215 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 GCSHP23434 173 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 POLR2KP53803 58 aaKnown RBP5.54□□□□□ -1.52
PSEN1-223ENST00000557511 KRTAP10-2P60368 255 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 ENHOQ6UWT2 76 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 TMEM136Q6ZRR5 245 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 ORMDL3Q8N138 153 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 OR5A1Q8NGJ0 315 aa5.54□□□□□ -1.52
PSEN1-223ENST00000557511 TRAV9-1A0A075B6T8 112 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 LRCOL1A6NCL2 159 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 TNFRSF6BO95407 300 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 RPS10P46783 165 aaKnown RBP5.53□□□□□ -1.52
PSEN1-223ENST00000557511 C20orf203Q8NBC4 194 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 PRELID3AQ96N28 172 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 PRR34Q9NV39 138 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 LAMTOR2Q9Y2Q5 125 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 FAT2Q9NYQ8 4349 aa5.53□□□□□ -1.52
PSEN1-223ENST00000557511 FRAS1Q86XX4 4008 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 IGLV4-60A0A075B6I1 120 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 IGLV10-54A0A075B6I4 117 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.52□□□□□ -1.53
PSEN1-223ENST00000557511 TRBV24-1A0A075B6N3 115 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 CDK2AP2O75956 126 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 TSHBP01222 138 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 ADCYAP1P18509 176 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 RPL32P62910 135 aaKnown RBP5.52□□□□□ -1.53
PSEN1-223ENST00000557511 RHEBQ15382 184 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 CFAP161Q6P656 301 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 NRACQ8N912 160 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 MAP1LC3AQ9H492 121 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 RPS10P5Q9NQ39 176 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 DNAH11Q96DT5 4516 aa5.52□□□□□ -1.53
PSEN1-223ENST00000557511 HECTD4Q9Y4D8 3996 aa5.51□□□□□ -1.53
PSEN1-223ENST00000557511 GAS8-AS1O95177 125 aa5.51□□□□□ -1.53
PSEN1-223ENST00000557511 ESDP10768 282 aa5.51□□□□□ -1.53
PSEN1-223ENST00000557511 SS18Q15532 418 aa5.51□□□□□ -1.53
PSEN1-223ENST00000557511 COX19Q49B96 90 aa5.51□□□□□ -1.53
PSEN1-223ENST00000557511 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
PSEN1-223ENST00000557511 CLRN3Q8NCR9 226 aa5.51□□□□□ -1.53
PSEN1-223ENST00000557511 SMIM2Q9BVW6 85 aa5.51□□□□□ -1.53
PSEN1-223ENST00000557511 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
PSEN1-223ENST00000557511 USP17L23D6RBM5 183 aa5.5□□□□□ -1.53
PSEN1-223ENST00000557511 SNAPINO95295 136 aa5.5□□□□□ -1.53
PSEN1-223ENST00000557511 NPYP01303 97 aa5.5□□□□□ -1.53
PSEN1-223ENST00000557511 APOC3P02656 99 aa5.5□□□□□ -1.53
PSEN1-223ENST00000557511 MRPL52Q86TS9 123 aaKnown RBP5.5□□□□□ -1.53
PSEN1-223ENST00000557511 SVBPQ8N300 66 aa5.5□□□□□ -1.53
PSEN1-223ENST00000557511 CARHSP1Q9Y2V2 147 aaKnown RBP5.5□□□□□ -1.53
PSEN1-223ENST00000557511 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
PSEN1-223ENST00000557511 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.49□□□□□ -1.53
PSEN1-223ENST00000557511 LOC389332A0A1B0GUA5 103 aa5.49□□□□□ -1.53
PSEN1-223ENST00000557511 GAGE12HA6NDE8 117 aa5.49□□□□□ -1.53
PSEN1-223ENST00000557511 CCL25O15444 150 aa5.49□□□□□ -1.53
PSEN1-223ENST00000557511 G0S2P27469 103 aa5.49□□□□□ -1.53
PSEN1-223ENST00000557511 FUSP35637 526 aaKnown RBP eCLIP5.49□□□□□ -1.53
PSEN1-223ENST00000557511 WFDC2Q14508 124 aa5.49□□□□□ -1.53
PSEN1-223ENST00000557511 ZNF664Q8N3J9 261 aa5.49□□□□□ -1.53
PSEN1-223ENST00000557511 MAPKAPK5-AS1Q8N8E1 139 aa5.49□□□□□ -1.53
PSEN1-223ENST00000557511 CHCHD10Q8WYQ3 142 aaPredicted RBP5.49□□□□□ -1.53
PSEN1-223ENST00000557511 KIAA1109Q2LD37 5005 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 PKD1P98161 4303 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 hDV102S1A0JD36 115 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 C1orf196B1AJZ1 125 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 MT-ND6P03923 174 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 IFI27P40305 119 aaPredicted RBP5.48□□□□□ -1.53
PSEN1-223ENST00000557511 ORMDL2Q53FV1 153 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 C10orf91Q5T1B1 145 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 TIMM21Q9BVV7 248 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 NXT2Q9NPJ8 142 aaKnown RBP5.48□□□□□ -1.53
PSEN1-223ENST00000557511 CDC42SE2Q9NRR3 84 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 SPANXA1Q9NS26 97 aa5.48□□□□□ -1.53
PSEN1-223ENST00000557511 CSDC2Q9Y534 153 aaKnown RBP5.48□□□□□ -1.53
PSEN1-223ENST00000557511 LINC00959A0A1B0GUT2 108 aa5.47□□□□□ -1.53
PSEN1-223ENST00000557511 K7EMI3 77 aa5.47□□□□□ -1.53
PSEN1-223ENST00000557511 MALP21145 153 aa5.47□□□□□ -1.53
PSEN1-223ENST00000557511 XCL1P47992 114 aa5.47□□□□□ -1.53
PSEN1-223ENST00000557511 Q8N8P6 123 aa5.47□□□□□ -1.53
PSEN1-223ENST00000557511 GNB1LQ9BYB4 327 aa5.47□□□□□ -1.53
PSEN1-223ENST00000557511 UBE2D4Q9Y2X8 147 aa5.47□□□□□ -1.53
PSEN1-223ENST00000557511 HERC2O95714 4834 aa5.46□□□□□ -1.54
PSEN1-223ENST00000557511 TRAV13-1A0A0B4J241 112 aa5.46□□□□□ -1.54
PSEN1-223ENST00000557511 PRSS47A8MTI9 375 aa5.46□□□□□ -1.54
PSEN1-223ENST00000557511 KRTAP10-1P60331 282 aa5.46□□□□□ -1.54
PSEN1-223ENST00000557511 FABP9Q0Z7S8 132 aa5.46□□□□□ -1.54
PSEN1-223ENST00000557511 Q6ZN92 141 aa5.46□□□□□ -1.54
PSEN1-223ENST00000557511 PRSS3P2Q8NHM4 247 aa5.46□□□□□ -1.54
PSEN1-223ENST00000557511 CYSLTR1Q9Y271 337 aa5.46□□□□□ -1.54
PSEN1-223ENST00000557511 RYR1P21817 5038 aa5.46□□□□□ -1.54
PSEN1-223ENST00000557511 IGHV1-58A0A0C4DH39 117 aa5.45□□□□□ -1.54
PSEN1-223ENST00000557511 APOMO95445 188 aa5.45□□□□□ -1.54
PSEN1-223ENST00000557511 PRSS1P07477 247 aa5.45□□□□□ -1.54
PSEN1-223ENST00000557511 KIAA1644Q3SXP7 199 aa5.45□□□□□ -1.54
PSEN1-223ENST00000557511 PAPPA-AS1Q5QFB9 102 aa5.45□□□□□ -1.54
PSEN1-223ENST00000557511 CD164L2Q6UWJ8 174 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms