RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 IMMP2LQ96T52 175 aa5.18□□□□□ -1.58
NEDD1-211ENST00000557454 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
NEDD1-211ENST00000557454 UBE2D4Q9Y2X8 147 aa5.18□□□□□ -1.58
NEDD1-211ENST00000557454 A0A1W2PPV4 95 aa5.17□□□□□ -1.58
NEDD1-211ENST00000557454 COX7A2LO14548 114 aa5.17□□□□□ -1.58
NEDD1-211ENST00000557454 SNAI2O43623 268 aa5.17□□□□□ -1.58
NEDD1-211ENST00000557454 NDUFB6O95139 128 aa5.17□□□□□ -1.58
NEDD1-211ENST00000557454 SUMO2P61956 95 aaKnown RBP5.17□□□□□ -1.58
NEDD1-211ENST00000557454 BLOC1S1P78537 153 aa5.17□□□□□ -1.58
NEDD1-211ENST00000557454 PCOTHQ58A44 107 aa5.17□□□□□ -1.58
NEDD1-211ENST00000557454 RASL11AQ6T310 242 aa5.17□□□□□ -1.58
NEDD1-211ENST00000557454 SMDT1Q9H4I9 107 aa5.17□□□□□ -1.58
NEDD1-211ENST00000557454 NPSP0C0P6 89 aa5.16□□□□□ -1.58
NEDD1-211ENST00000557454 TLX1NBP0CAT3 122 aa5.16□□□□□ -1.58
NEDD1-211ENST00000557454 C10orf25Q5T742 122 aa5.16□□□□□ -1.58
NEDD1-211ENST00000557454 KRTAP5-3Q6L8H2 238 aa5.16□□□□□ -1.58
NEDD1-211ENST00000557454 COX8CQ7Z4L0 72 aa5.16□□□□□ -1.58
NEDD1-211ENST00000557454 DAND5Q8N907 189 aa5.16□□□□□ -1.58
NEDD1-211ENST00000557454 MRPL35Q9NZE8 188 aaKnown RBP5.16□□□□□ -1.58
NEDD1-211ENST00000557454 BCE1O60756 84 aa5.15□□□□□ -1.59
NEDD1-211ENST00000557454 GCHFRP30047 84 aa5.15□□□□□ -1.59
NEDD1-211ENST00000557454 RBM38Q9H0Z9 239 aaKnown RBP5.15□□□□□ -1.59
NEDD1-211ENST00000557454 NIT2Q9NQR4 276 aa5.15□□□□□ -1.59
NEDD1-211ENST00000557454 A0A087WXM4 84 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 G3V3Q6 166 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 PEX7O00628 323 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 OR5AL1P0C617 328 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 ZNF25P17030 456 aaPredicted RBP5.14□□□□□ -1.59
NEDD1-211ENST00000557454 NTF3P20783 257 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 IL15RAQ13261 267 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 PYDC2Q56P42 97 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 C9orf129Q5T035 196 aaKnown RBP5.14□□□□□ -1.59
NEDD1-211ENST00000557454 C3orf22Q8N5N4 141 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 DEDD2Q8WXF8 326 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 TMEM101Q96IK0 257 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 BTF3L4Q96K17 158 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 KIR2DL4Q99706 377 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 C6orf48Q9UBA6 75 aa5.14□□□□□ -1.59
NEDD1-211ENST00000557454 H7C423 109 aa5.13□□□□□ -1.59
NEDD1-211ENST00000557454 APCSP02743 223 aa5.13□□□□□ -1.59
NEDD1-211ENST00000557454 STAG3L2P0CL84 134 aa5.13□□□□□ -1.59
NEDD1-211ENST00000557454 STAG3L3P0CL85 134 aa5.13□□□□□ -1.59
NEDD1-211ENST00000557454 CDC34P49427 236 aaPredicted RBP5.13□□□□□ -1.59
NEDD1-211ENST00000557454 SPAG11AQ6PDA7 123 aa5.13□□□□□ -1.59
NEDD1-211ENST00000557454 C5orf38Q86SI9 138 aa5.13□□□□□ -1.59
NEDD1-211ENST00000557454 ZFP30Q9Y2G7 519 aa5.13□□□□□ -1.59
NEDD1-211ENST00000557454 NDUFA1O15239 70 aa5.12□□□□□ -1.59
NEDD1-211ENST00000557454 CXCL1P09341 107 aa5.12□□□□□ -1.59
NEDD1-211ENST00000557454 CTRLP40313 264 aa5.12□□□□□ -1.59
NEDD1-211ENST00000557454 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
NEDD1-211ENST00000557454 UNQ6190/PRO20217Q6UXQ8 127 aa5.11□□□□□ -1.59
NEDD1-211ENST00000557454 SCGB1C1Q8TD33 95 aa5.11□□□□□ -1.59
NEDD1-211ENST00000557454 C22orf24Q9Y442 160 aa5.11□□□□□ -1.59
NEDD1-211ENST00000557454 NCR2O95944 276 aa5.1□□□□□ -1.59
NEDD1-211ENST00000557454 OR10D4PQ8NGN7 298 aa5.1□□□□□ -1.59
NEDD1-211ENST00000557454 ORAOV1Q8WV07 137 aa5.1□□□□□ -1.59
NEDD1-211ENST00000557454 SMIM3Q9BZL3 60 aa5.1□□□□□ -1.59
NEDD1-211ENST00000557454 CDC42SE2Q9NRR3 84 aa5.1□□□□□ -1.59
NEDD1-211ENST00000557454 TMEM167BQ9NRX6 74 aa5.1□□□□□ -1.59
NEDD1-211ENST00000557454 ALG5Q9Y673 324 aa5.1□□□□□ -1.59
NEDD1-211ENST00000557454 A0A1W2PRE2 83 aa5.09□□□□□ -1.59
NEDD1-211ENST00000557454 C1orf196B1AJZ1 125 aa5.09□□□□□ -1.59
NEDD1-211ENST00000557454 LTAP01374 205 aa5.09□□□□□ -1.59
NEDD1-211ENST00000557454 UBE2G1P62253 170 aa5.09□□□□□ -1.59
NEDD1-211ENST00000557454 KRTAP13-1Q8IUC0 172 aa5.09□□□□□ -1.59
NEDD1-211ENST00000557454 FMC1Q96HJ9 113 aa5.09□□□□□ -1.59
NEDD1-211ENST00000557454 V9GYH0 126 aa5.09□□□□□ -1.59
NEDD1-211ENST00000557454 BTCP35070 178 aa5.08□□□□□ -1.6
NEDD1-211ENST00000557454 UBE2G2P60604 165 aa5.08□□□□□ -1.6
NEDD1-211ENST00000557454 TMEM241Q24JQ0 296 aa5.08□□□□□ -1.6
NEDD1-211ENST00000557454 LBHQ53QV2 105 aaPredicted RBP5.08□□□□□ -1.6
NEDD1-211ENST00000557454 HIST1H2BAQ96A08 127 aa5.08□□□□□ -1.6
NEDD1-211ENST00000557454 SEC22CQ9BRL7 303 aa5.08□□□□□ -1.6
NEDD1-211ENST00000557454 TPPP3Q9BW30 176 aa5.08□□□□□ -1.6
NEDD1-211ENST00000557454 NDUFA12Q9UI09 145 aa5.08□□□□□ -1.6
NEDD1-211ENST00000557454 TRAV13-1A0A0B4J241 112 aa5.07□□□□□ -1.6
NEDD1-211ENST00000557454 NAP1L6A6NFF2 107 aa5.07□□□□□ -1.6
NEDD1-211ENST00000557454 F8WDY8 70 aa5.07□□□□□ -1.6
NEDD1-211ENST00000557454 UBE2AP49459 152 aa5.07□□□□□ -1.6
NEDD1-211ENST00000557454 DEFA1P59665 94 aa5.07□□□□□ -1.6
NEDD1-211ENST00000557454 LINC00846Q9NV44 126 aa5.07□□□□□ -1.6
NEDD1-211ENST00000557454 NDUFC2-KCTD14E9PQ53 114 aa5.06□□□□□ -1.6
NEDD1-211ENST00000557454 CXorf1O96002 111 aa5.06□□□□□ -1.6
NEDD1-211ENST00000557454 RNASE13Q5GAN3 156 aaKnown RBP5.06□□□□□ -1.6
NEDD1-211ENST00000557454 RPL39LQ96EH5 51 aaKnown RBP5.06□□□□□ -1.6
NEDD1-211ENST00000557454 RPL37AP8A6NKH3 93 aa5.05□□□□□ -1.6
NEDD1-211ENST00000557454 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
NEDD1-211ENST00000557454 MRPL55Q7Z7F7 128 aaKnown RBP5.05□□□□□ -1.6
NEDD1-211ENST00000557454 MRPL52Q86TS9 123 aaKnown RBP5.05□□□□□ -1.6
NEDD1-211ENST00000557454 GATD1Q8NB37 220 aa5.05□□□□□ -1.6
NEDD1-211ENST00000557454 PACRGQ96M98 296 aaPredicted RBP5.05□□□□□ -1.6
NEDD1-211ENST00000557454 HSPB11Q9Y547 144 aa5.05□□□□□ -1.6
NEDD1-211ENST00000557454 PRYO14603 147 aa5.04□□□□□ -1.6
NEDD1-211ENST00000557454 LINC00469Q8N7U9 141 aa5.04□□□□□ -1.6
NEDD1-211ENST00000557454 Q8NBF4 154 aa5.04□□□□□ -1.6
NEDD1-211ENST00000557454 MRAP2Q96G30 205 aa5.04□□□□□ -1.6
NEDD1-211ENST00000557454 SDHAF1A6NFY7 115 aa5.03□□□□□ -1.6
NEDD1-211ENST00000557454 FAM74A7A6NL05 159 aa5.03□□□□□ -1.6
NEDD1-211ENST00000557454 TRGC1P0CF51 173 aa5.03□□□□□ -1.6
NEDD1-211ENST00000557454 MARVELD1Q9BSK0 173 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms