RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 LAMTOR2Q9Y2Q5 125 aa9.13□□□□□ -0.95
VPS33B-206ENST00000557358 HERC2O95714 4834 aa9.13□□□□□ -0.95
VPS33B-206ENST00000557358 PHOX2AO14813 284 aa9.12□□□□□ -0.95
VPS33B-206ENST00000557358 TCAPO15273 167 aa9.12□□□□□ -0.95
VPS33B-206ENST00000557358 ZNF25P17030 456 aaPredicted RBP9.12□□□□□ -0.95
VPS33B-206ENST00000557358 KRTAP10-1P60331 282 aa9.12□□□□□ -0.95
VPS33B-206ENST00000557358 C20orf203Q8NBC4 194 aa9.12□□□□□ -0.95
VPS33B-206ENST00000557358 IGLV4-60A0A075B6I1 120 aa9.11□□□□□ -0.95
VPS33B-206ENST00000557358 TRBV27A0A0K0K1C4 114 aa9.11□□□□□ -0.95
VPS33B-206ENST00000557358 SUMO2P61956 95 aaKnown RBP9.11□□□□□ -0.95
VPS33B-206ENST00000557358 WFDC2Q14508 124 aa9.11□□□□□ -0.95
VPS33B-206ENST00000557358 TMEM18Q96B42 140 aa9.11□□□□□ -0.95
VPS33B-206ENST00000557358 LRP1BQ9NZR2 4599 aa9.11□□□□□ -0.95
VPS33B-206ENST00000557358 IGLV10-54A0A075B6I4 117 aa9.1□□□□□ -0.95
VPS33B-206ENST00000557358 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.1□□□□□ -0.95
VPS33B-206ENST00000557358 IGKV2-29A2NJV5 120 aaPredicted RBP9.1□□□□□ -0.95
VPS33B-206ENST00000557358 C1orf196B1AJZ1 125 aa9.1□□□□□ -0.95
VPS33B-206ENST00000557358 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
VPS33B-206ENST00000557358 FGF6P10767 208 aa9.1□□□□□ -0.95
VPS33B-206ENST00000557358 DGAT2L7PQ6IED9 249 aa9.1□□□□□ -0.95
VPS33B-206ENST00000557358 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
VPS33B-206ENST00000557358 OR5A1Q8NGJ0 315 aa9.1□□□□□ -0.95
VPS33B-206ENST00000557358 C20orf78Q9BR46 151 aa9.1□□□□□ -0.95
VPS33B-206ENST00000557358 MAP1LC3AQ9H492 121 aa9.1□□□□□ -0.95
VPS33B-206ENST00000557358 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
VPS33B-206ENST00000557358 POLR2KP53803 58 aaKnown RBP9.09□□□□□ -0.95
VPS33B-206ENST00000557358 Q8N1X5 172 aa9.09□□□□□ -0.95
VPS33B-206ENST00000557358 C18orf32Q8TCD1 76 aa9.09□□□□□ -0.95
VPS33B-206ENST00000557358 AP5S1Q9NUS5 200 aa9.09□□□□□ -0.95
VPS33B-206ENST00000557358 RYR1P21817 5038 aa9.08□□□□□ -0.96
VPS33B-206ENST00000557358 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
VPS33B-206ENST00000557358 RAB5BP61020 215 aa9.08□□□□□ -0.96
VPS33B-206ENST00000557358 RPL32P62910 135 aaKnown RBP9.08□□□□□ -0.96
VPS33B-206ENST00000557358 SMIM2Q9BVW6 85 aa9.08□□□□□ -0.96
VPS33B-206ENST00000557358 LOC389332A0A1B0GUA5 103 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST1H2BKO60814 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 TSHBP01222 138 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST1H2BJP06899 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST1H2BOP23527 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST1H2BBP33778 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST1H2BDP58876 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST1H2BCP62807 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST2H2BEQ16778 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST1H2BHQ93079 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST1H2BNQ99877 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 HIST1H2BMQ99879 126 aa9.07□□□□□ -0.96
VPS33B-206ENST00000557358 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
VPS33B-206ENST00000557358 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
VPS33B-206ENST00000557358 ESDP10768 282 aa9.06□□□□□ -0.96
VPS33B-206ENST00000557358 NXT2Q9NPJ8 142 aaKnown RBP9.06□□□□□ -0.96
VPS33B-206ENST00000557358 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-206ENST00000557358 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
VPS33B-206ENST00000557358 FAM229AH3BQW9 127 aa9.05□□□□□ -0.96
VPS33B-206ENST00000557358 SS18Q15532 418 aa9.05□□□□□ -0.96
VPS33B-206ENST00000557358 Q8N8P6 123 aa9.05□□□□□ -0.96
VPS33B-206ENST00000557358 PRSS3P2Q8NHM4 247 aa9.05□□□□□ -0.96
VPS33B-206ENST00000557358 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
VPS33B-206ENST00000557358 IFI27P40305 119 aaPredicted RBP9.04□□□□□ -0.96
VPS33B-206ENST00000557358 XGP55808 180 aa9.04□□□□□ -0.96
VPS33B-206ENST00000557358 MRPL52Q86TS9 123 aaKnown RBP9.04□□□□□ -0.96
VPS33B-206ENST00000557358 BAGE3Q86Y29 109 aa9.04□□□□□ -0.96
VPS33B-206ENST00000557358 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
VPS33B-206ENST00000557358 FA2HQ7L5A8 372 aa9.03□□□□□ -0.96
VPS33B-206ENST00000557358 K7EMI3 77 aa9.02□□□□□ -0.97
VPS33B-206ENST00000557358 CCL25O15444 150 aa9.02□□□□□ -0.97
VPS33B-206ENST00000557358 PRSS1P07477 247 aa9.02□□□□□ -0.97
VPS33B-206ENST00000557358 KRTAP26-1Q6PEX3 210 aa9.02□□□□□ -0.97
VPS33B-206ENST00000557358 ZNF664Q8N3J9 261 aa9.02□□□□□ -0.97
VPS33B-206ENST00000557358 CSDC2Q9Y534 153 aaKnown RBP9.02□□□□□ -0.97
VPS33B-206ENST00000557358 HSPG2P98160 4391 aa9.02□□□□□ -0.97
VPS33B-206ENST00000557358 LINC00614P0C842 121 aa9.01□□□□□ -0.97
VPS33B-206ENST00000557358 CHCHD1Q96BP2 118 aaKnown RBP9.01□□□□□ -0.97
VPS33B-206ENST00000557358 URB1-AS1Q96HZ7 61 aa9.01□□□□□ -0.97
VPS33B-206ENST00000557358 CDC42SE2Q9NRR3 84 aa9.01□□□□□ -0.97
VPS33B-206ENST00000557358 LINC00959A0A1B0GUT2 108 aa9□□□□□ -0.97
VPS33B-206ENST00000557358 LINC01546A6NGU7 62 aa9□□□□□ -0.97
VPS33B-206ENST00000557358 SERF1AO75920 110 aa9□□□□□ -0.97
VPS33B-206ENST00000557358 XCL1P47992 114 aa9□□□□□ -0.97
VPS33B-206ENST00000557358 NDUFA6P56556 154 aa9□□□□□ -0.97
VPS33B-206ENST00000557358 LINC01620Q4KN68 170 aa9□□□□□ -0.97
VPS33B-206ENST00000557358 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
VPS33B-206ENST00000557358 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
VPS33B-206ENST00000557358 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
VPS33B-206ENST00000557358 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
VPS33B-206ENST00000557358 LINC00310P59036 64 aa8.99□□□□□ -0.97
VPS33B-206ENST00000557358 CNBPP62633 177 aaKnown RBP8.99□□□□□ -0.97
VPS33B-206ENST00000557358 Q5VSD8 79 aa8.99□□□□□ -0.97
VPS33B-206ENST00000557358 Q6ZSA8 131 aa8.99□□□□□ -0.97
VPS33B-206ENST00000557358 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
VPS33B-206ENST00000557358 FAM30AQ9NZY2 134 aa8.99□□□□□ -0.97
VPS33B-206ENST00000557358 PKIGQ9Y2B9 76 aa8.99□□□□□ -0.97
VPS33B-206ENST00000557358 UBE2D4Q9Y2X8 147 aa8.99□□□□□ -0.97
VPS33B-206ENST00000557358 IGHV3-64A0A075B6Q5 118 aa8.98□□□□□ -0.97
VPS33B-206ENST00000557358 HSBP1O75506 76 aa8.98□□□□□ -0.97
VPS33B-206ENST00000557358 S100A6P06703 90 aa8.98□□□□□ -0.97
VPS33B-206ENST00000557358 MALP21145 153 aa8.98□□□□□ -0.97
VPS33B-206ENST00000557358 HAMPP81172 84 aa8.98□□□□□ -0.97
VPS33B-206ENST00000557358 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
VPS33B-206ENST00000557358 CD164L2Q6UWJ8 174 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms