RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 LOC102724200A0A096LPH7 203 aaPredicted RBP1.88□□□□□ -2.11
VRK1-207ENST00000557352 C7orf71A4D174 169 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 LINC01546A6NGU7 62 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 OR11H12B2RN74 326 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 K7EMI3 77 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 M0R381 172 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 PPP1R17O96001 155 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 TRGC2P03986 189 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 S100A6P06703 90 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 GPX1P07203 203 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 ZNF688P0C7X2 276 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 TRGC1P0CF51 173 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 ZNF80P51504 273 aaPredicted RBP1.88□□□□□ -2.11
VRK1-207ENST00000557352 PSMG4Q5JS54 123 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 MORN3Q6PF18 240 aaPredicted RBP1.88□□□□□ -2.11
VRK1-207ENST00000557352 FER1L6-AS1Q8NA97 138 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 Q8TAT8 98 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 TRAPPC1Q9Y5R8 145 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 U3KQK5 164 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 NBEAL2Q6ZNJ1 2754 aa1.88□□□□□ -2.11
VRK1-207ENST00000557352 LOC105371267A0A1B0GV96 52 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 A0A1B0GVX0 72 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 LINC01549A6NIU2 74 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 CRXO43186 299 aaPredicted RBP1.87□□□□□ -2.11
VRK1-207ENST00000557352 APCSP02743 223 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 ORM1P02763 201 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 ARMS2P0C7Q2 107 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 RNASE3P12724 160 aaKnown RBP1.87□□□□□ -2.11
VRK1-207ENST00000557352 RAB4AP20338 218 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 PMCHP20382 165 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 ASIPP42127 132 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 DEFB131AP59861 70 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 FABP9Q0Z7S8 132 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 LGALS9BQ3B8N2 356 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 GDF5OSQ5U4N7 250 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 FAM104BQ5XKR9 115 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 LYZL1Q6UWQ5 148 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 ZNF705AQ6ZN79 300 aaPredicted RBP1.87□□□□□ -2.11
VRK1-207ENST00000557352 ORMDL3Q8N138 153 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 ZFP82Q8N141 532 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.87□□□□□ -2.11
VRK1-207ENST00000557352 CHCHD1Q96BP2 118 aaKnown RBP1.87□□□□□ -2.11
VRK1-207ENST00000557352 MRAP2Q96G30 205 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 C18orf15Q96N68 181 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 AP1S3Q96PC3 154 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 CHAC1Q9BUX1 264 aa1.87□□□□□ -2.11
VRK1-207ENST00000557352 CSDC2Q9Y534 153 aaKnown RBP1.87□□□□□ -2.11
VRK1-207ENST00000557352 TENM3Q9P273 2699 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 IGKV3-7A0A075B6H7 116 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 TRBV6-5A0A0K0K1A5 114 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 SMIM9A6NGZ8 99 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 M0R2P5 195 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 TCAPO15273 167 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 ZNF705DP0CH99 300 aaPredicted RBP1.86□□□□□ -2.11
VRK1-207ENST00000557352 ZNF705BP0CI00 300 aaPredicted RBP1.86□□□□□ -2.11
VRK1-207ENST00000557352 SMIM6P0DI80 62 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 GZMBP10144 247 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 NTF3P20783 257 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 S100A4P26447 101 aaKnown RBP1.86□□□□□ -2.11
VRK1-207ENST00000557352 SRIP30626 198 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 RNASE4P34096 147 aaKnown RBP1.86□□□□□ -2.11
VRK1-207ENST00000557352 AKR1D1P51857 326 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 TCL1AP56279 114 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 SPINK13Q1W4C9 94 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 MRPL54Q6P161 138 aaKnown RBP1.86□□□□□ -2.11
VRK1-207ENST00000557352 SMIM15Q7Z3B0 74 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 HIST3H2BBQ8N257 126 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 C15orf56Q8N910 161 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 C11orf72Q8NBR9 251 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 C18orf32Q8TCD1 76 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 TMEM263Q8WUH6 116 aaKnown RBP1.86□□□□□ -2.11
VRK1-207ENST00000557352 C20orf78Q9BR46 151 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 DPH3P1Q9H4G8 78 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 NAGKQ9UJ70 344 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 PHLDA3Q9Y5J5 127 aa1.86□□□□□ -2.11
VRK1-207ENST00000557352 STAB2Q8WWQ8 2551 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 TRAV12-3A0A0B4J271 114 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 TRBV10-1A0A0K0K1A3 114 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 KNCNA6PVL3 124 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 A8MWV9 139 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 H3BVH4 76 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 H7C1H1 209 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 M0R2Z0 102 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 SPINK4O60575 86 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 CD7P09564 240 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 G0S2P27469 103 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 DEFB1P60022 68 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 RAB4BP61018 213 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 RBMY1FQ15415 496 aaKnown RBP1.85□□□□□ -2.11
VRK1-207ENST00000557352 MRPL51Q4U2R6 128 aaKnown RBP1.85□□□□□ -2.11
VRK1-207ENST00000557352 ORMDL2Q53FV1 153 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 SPANXN1Q5VSR9 72 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 C12orf54Q6X4T0 127 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 AMN1Q8IY45 258 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 C1orf158Q8N1D5 194 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 C3orf56Q8N813 242 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 OR10AG1Q8NH19 301 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 PRELID3AQ96N28 172 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 HIST1H2BLQ99880 126 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms