RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 A0A1B0GV50 99 aa7.41□□□□□ -1.22
PSEN1-221ENST00000557293 G3V3Q6 166 aa7.41□□□□□ -1.22
PSEN1-221ENST00000557293 RPL13AP40429 203 aaKnown RBP7.41□□□□□ -1.22
PSEN1-221ENST00000557293 RPL18AQ02543 176 aaKnown RBP7.41□□□□□ -1.22
PSEN1-221ENST00000557293 MRPL52Q86TS9 123 aaKnown RBP7.41□□□□□ -1.22
PSEN1-221ENST00000557293 C11orf52Q96A22 123 aa7.41□□□□□ -1.22
PSEN1-221ENST00000557293 CNFNQ9BYD5 112 aa7.41□□□□□ -1.22
PSEN1-221ENST00000557293 CARHSP1Q9Y2V2 147 aaKnown RBP7.41□□□□□ -1.22
PSEN1-221ENST00000557293 RAB19A4D1S5 217 aa7.4□□□□□ -1.22
PSEN1-221ENST00000557293 TSHBP01222 138 aa7.4□□□□□ -1.22
PSEN1-221ENST00000557293 IFNA1P01562 189 aa7.4□□□□□ -1.22
PSEN1-221ENST00000557293 GIPP09681 153 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-221ENST00000557293 CTRLP40313 264 aa7.4□□□□□ -1.22
PSEN1-221ENST00000557293 UBE2D1P51668 147 aa7.4□□□□□ -1.22
PSEN1-221ENST00000557293 TMEM101Q96IK0 257 aa7.4□□□□□ -1.22
PSEN1-221ENST00000557293 BTF3L4Q96K17 158 aa7.4□□□□□ -1.22
PSEN1-221ENST00000557293 PFDN1O60925 122 aa7.39□□□□□ -1.23
PSEN1-221ENST00000557293 CCL20P78556 96 aa7.39□□□□□ -1.23
PSEN1-221ENST00000557293 CENPWQ5EE01 88 aa7.39□□□□□ -1.23
PSEN1-221ENST00000557293 KCNRGQ8N5I3 272 aa7.39□□□□□ -1.23
PSEN1-221ENST00000557293 TRBV20OR9-2A0A075B6H5 130 aa7.38□□□□□ -1.23
PSEN1-221ENST00000557293 TRBV6-5A0A0K0K1A5 114 aa7.38□□□□□ -1.23
PSEN1-221ENST00000557293 I3L3M4 83 aa7.38□□□□□ -1.23
PSEN1-221ENST00000557293 COX7A2LO14548 114 aa7.38□□□□□ -1.23
PSEN1-221ENST00000557293 PMCHP20382 165 aa7.38□□□□□ -1.23
PSEN1-221ENST00000557293 TWIST1Q15672 202 aa7.38□□□□□ -1.23
PSEN1-221ENST00000557293 EIF5AL1Q6IS14 154 aaKnown RBP7.38□□□□□ -1.23
PSEN1-221ENST00000557293 NUDT10Q8NFP7 164 aa7.38□□□□□ -1.23
PSEN1-221ENST00000557293 NUDT11Q96G61 164 aa7.38□□□□□ -1.23
PSEN1-221ENST00000557293 RPP21Q9H633 154 aaKnown RBP7.38□□□□□ -1.23
PSEN1-221ENST00000557293 XKRY2A2RUG3 117 aa7.37□□□□□ -1.23
PSEN1-221ENST00000557293 C1orf196B1AJZ1 125 aa7.37□□□□□ -1.23
PSEN1-221ENST00000557293 MALP21145 153 aa7.37□□□□□ -1.23
PSEN1-221ENST00000557293 C10orf25Q5T742 122 aa7.37□□□□□ -1.23
PSEN1-221ENST00000557293 C5orf38Q86SI9 138 aa7.37□□□□□ -1.23
PSEN1-221ENST00000557293 FAM213BQ8TBF2 198 aa7.37□□□□□ -1.23
PSEN1-221ENST00000557293 TMEM242Q9NWH2 141 aa7.37□□□□□ -1.23
PSEN1-221ENST00000557293 POLR2KP53803 58 aaKnown RBP7.36□□□□□ -1.23
PSEN1-221ENST00000557293 TSKUQ8WUA8 353 aa7.36□□□□□ -1.23
PSEN1-221ENST00000557293 RNASE7Q9H1E1 156 aaKnown RBP7.36□□□□□ -1.23
PSEN1-221ENST00000557293 TLX1NBP0CAT3 122 aa7.35□□□□□ -1.23
PSEN1-221ENST00000557293 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
PSEN1-221ENST00000557293 MRAP2Q96G30 205 aa7.35□□□□□ -1.23
PSEN1-221ENST00000557293 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
PSEN1-221ENST00000557293 A0A087X002 238 aa7.34□□□□□ -1.23
PSEN1-221ENST00000557293 H2AFB1P0C5Y9 115 aa7.34□□□□□ -1.23
PSEN1-221ENST00000557293 SPAG11BQ08648 103 aa7.34□□□□□ -1.23
PSEN1-221ENST00000557293 RNASE13Q5GAN3 156 aaKnown RBP7.34□□□□□ -1.23
PSEN1-221ENST00000557293 TEX261Q6UWH6 196 aa7.34□□□□□ -1.23
PSEN1-221ENST00000557293 SMIM12Q96EX1 92 aa7.34□□□□□ -1.23
PSEN1-221ENST00000557293 UMAD1C9J7I0 102 aa7.33□□□□□ -1.24
PSEN1-221ENST00000557293 ARPC5O15511 151 aa7.33□□□□□ -1.24
PSEN1-221ENST00000557293 ZNF861PO60384 105 aa7.33□□□□□ -1.24
PSEN1-221ENST00000557293 GNG4P50150 75 aa7.33□□□□□ -1.24
PSEN1-221ENST00000557293 UNQ6190/PRO20217Q6UXQ8 127 aa7.33□□□□□ -1.24
PSEN1-221ENST00000557293 IMMP2LQ96T52 175 aa7.33□□□□□ -1.24
PSEN1-221ENST00000557293 TRAV13-1A0A0B4J241 112 aa7.32□□□□□ -1.24
PSEN1-221ENST00000557293 FAM210AQ96ND0 272 aa7.32□□□□□ -1.24
PSEN1-221ENST00000557293 C6orf48Q9UBA6 75 aa7.32□□□□□ -1.24
PSEN1-221ENST00000557293 CSDC2Q9Y534 153 aaKnown RBP7.32□□□□□ -1.24
PSEN1-221ENST00000557293 TRBV27A0A0K0K1C4 114 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 C7orf77A4D0Y5 90 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 M0QXV9 152 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 GAGE2EQ4V326 116 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 OR10D4PQ8NGN7 298 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 FAM104AQ969W3 186 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 RETNLBQ9BQ08 111 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 SMDT1Q9H4I9 107 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 ST20Q9HBF5 79 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 GNG13Q9P2W3 67 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 GAGE2DQ9UEU5 116 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 UBE2D4Q9Y2X8 147 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 FSIP2Q5CZC0 6907 aa7.31□□□□□ -1.24
PSEN1-221ENST00000557293 F8WDY8 70 aa7.3□□□□□ -1.24
PSEN1-221ENST00000557293 UBE2BP63146 152 aa7.3□□□□□ -1.24
PSEN1-221ENST00000557293 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
PSEN1-221ENST00000557293 TMEM241Q24JQ0 296 aa7.3□□□□□ -1.24
PSEN1-221ENST00000557293 MANBALQ9NQG1 85 aa7.3□□□□□ -1.24
PSEN1-221ENST00000557293 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
PSEN1-221ENST00000557293 K7EN84 100 aa7.29□□□□□ -1.24
PSEN1-221ENST00000557293 C9orf129Q5T035 196 aaKnown RBP7.29□□□□□ -1.24
PSEN1-221ENST00000557293 ORAOV1Q8WV07 137 aa7.29□□□□□ -1.24
PSEN1-221ENST00000557293 NDUFA1O15239 70 aa7.28□□□□□ -1.24
PSEN1-221ENST00000557293 KIAA0087Q14695 138 aa7.28□□□□□ -1.24
PSEN1-221ENST00000557293 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
PSEN1-221ENST00000557293 Q6ZUT4 128 aa7.28□□□□□ -1.24
PSEN1-221ENST00000557293 SMIM15Q7Z3B0 74 aa7.28□□□□□ -1.24
PSEN1-221ENST00000557293 OCC1Q8TAD7 63 aa7.28□□□□□ -1.24
PSEN1-221ENST00000557293 TYMSOSQ8TAI1 123 aa7.28□□□□□ -1.24
PSEN1-221ENST00000557293 CDIP1Q9H305 208 aa7.28□□□□□ -1.24
PSEN1-221ENST00000557293 BIN3Q9NQY0 253 aa7.28□□□□□ -1.24
PSEN1-221ENST00000557293 SMLR1H3BR10 107 aa7.27□□□□□ -1.25
PSEN1-221ENST00000557293 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
PSEN1-221ENST00000557293 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
PSEN1-221ENST00000557293 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.25
PSEN1-221ENST00000557293 MED9Q9NWA0 146 aa7.27□□□□□ -1.25
PSEN1-221ENST00000557293 RAB4AP20338 218 aa7.26□□□□□ -1.25
PSEN1-221ENST00000557293 TIMM21Q9BVV7 248 aa7.26□□□□□ -1.25
PSEN1-221ENST00000557293 ANAPC11Q9NYG5 84 aa7.26□□□□□ -1.25
PSEN1-221ENST00000557293 IGLV7-46A0A075B6I9 117 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms