RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 EIF4EBP3O60516 100 aaPredicted RBP7.06□□□□□ -1.28
PSEN1-220ENST00000557037 NOL3O60936 208 aaKnown RBP7.06□□□□□ -1.28
PSEN1-220ENST00000557037 MRPL35Q9NZE8 188 aaKnown RBP7.06□□□□□ -1.28
PSEN1-220ENST00000557037 G3V3Q6 166 aa7.05□□□□□ -1.28
PSEN1-220ENST00000557037 LYRM1O43325 122 aa7.05□□□□□ -1.28
PSEN1-220ENST00000557037 NCR2O95944 276 aa7.05□□□□□ -1.28
PSEN1-220ENST00000557037 IL7P13232 177 aa7.05□□□□□ -1.28
PSEN1-220ENST00000557037 ATP6V0CP27449 155 aa7.05□□□□□ -1.28
PSEN1-220ENST00000557037 AKR1C3P42330 323 aa7.05□□□□□ -1.28
PSEN1-220ENST00000557037 RPL28P46779 137 aaKnown RBP7.05□□□□□ -1.28
PSEN1-220ENST00000557037 TMEM238LA0A1B0GVL6 79 aa7.04□□□□□ -1.28
PSEN1-220ENST00000557037 NUPR1O60356 82 aa7.04□□□□□ -1.28
PSEN1-220ENST00000557037 UNQ6190/PRO20217Q6UXQ8 127 aa7.04□□□□□ -1.28
PSEN1-220ENST00000557037 PPP1R1CQ8WVI7 109 aa7.04□□□□□ -1.28
PSEN1-220ENST00000557037 RPL39LQ96EH5 51 aaKnown RBP7.04□□□□□ -1.28
PSEN1-220ENST00000557037 SMDT1Q9H4I9 107 aa7.04□□□□□ -1.28
PSEN1-220ENST00000557037 CDC42SE2Q9NRR3 84 aa7.04□□□□□ -1.28
PSEN1-220ENST00000557037 CCDC160A6NGH7 325 aa7.03□□□□□ -1.28
PSEN1-220ENST00000557037 TLX1NBP0CAT3 122 aa7.03□□□□□ -1.28
PSEN1-220ENST00000557037 LINC00242Q5T6M2 205 aa7.03□□□□□ -1.28
PSEN1-220ENST00000557037 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-220ENST00000557037 GATD1Q8NB37 220 aa7.03□□□□□ -1.28
PSEN1-220ENST00000557037 NKX6-2Q9C056 277 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-220ENST00000557037 C6orf48Q9UBA6 75 aa7.03□□□□□ -1.28
PSEN1-220ENST00000557037 IGKV2D-26A0A0A0MRZ7 120 aa7.02□□□□□ -1.29
PSEN1-220ENST00000557037 C1orf196B1AJZ1 125 aa7.02□□□□□ -1.29
PSEN1-220ENST00000557037 NDUFA1O15239 70 aa7.02□□□□□ -1.29
PSEN1-220ENST00000557037 MPC2O95563 127 aa7.02□□□□□ -1.29
PSEN1-220ENST00000557037 MBP02144 154 aa7.02□□□□□ -1.29
PSEN1-220ENST00000557037 ZNF726P1Q15940 193 aa7.02□□□□□ -1.29
PSEN1-220ENST00000557037 ALG5Q9Y673 324 aa7.02□□□□□ -1.29
PSEN1-220ENST00000557037 INMT-MINDY4F8WBC2 141 aa7.01□□□□□ -1.29
PSEN1-220ENST00000557037 IGLC6P0CF74 106 aa7.01□□□□□ -1.29
PSEN1-220ENST00000557037 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
PSEN1-220ENST00000557037 RNASE13Q5GAN3 156 aaKnown RBP7.01□□□□□ -1.29
PSEN1-220ENST00000557037 C9orf129Q5T035 196 aaKnown RBP7.01□□□□□ -1.29
PSEN1-220ENST00000557037 STOML3Q8TAV4 291 aa7.01□□□□□ -1.29
PSEN1-220ENST00000557037 ORAOV1Q8WV07 137 aa7.01□□□□□ -1.29
PSEN1-220ENST00000557037 PSMG3Q9BT73 122 aaPredicted RBP7.01□□□□□ -1.29
PSEN1-220ENST00000557037 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
PSEN1-220ENST00000557037 TRAV13-1A0A0B4J241 112 aa7□□□□□ -1.29
PSEN1-220ENST00000557037 TRGC1P0CF51 173 aa7□□□□□ -1.29
PSEN1-220ENST00000557037 H2BFSP57053 126 aa7□□□□□ -1.29
PSEN1-220ENST00000557037 CST9LP1Q5W188 147 aa7□□□□□ -1.29
PSEN1-220ENST00000557037 BAGE2Q86Y30 109 aa7□□□□□ -1.29
PSEN1-220ENST00000557037 SDHAF1A6NFY7 115 aa6.99□□□□□ -1.29
PSEN1-220ENST00000557037 BCE1O60756 84 aa6.99□□□□□ -1.29
PSEN1-220ENST00000557037 PMCHP20382 165 aa6.99□□□□□ -1.29
PSEN1-220ENST00000557037 TMEM241Q24JQ0 296 aa6.99□□□□□ -1.29
PSEN1-220ENST00000557037 MZT2BQ6NZ67 158 aa6.99□□□□□ -1.29
PSEN1-220ENST00000557037 OR10D4PQ8NGN7 298 aa6.99□□□□□ -1.29
PSEN1-220ENST00000557037 TNFSF18Q9UNG2 199 aa6.99□□□□□ -1.29
PSEN1-220ENST00000557037 CTXND1A0A1B0GTU2 59 aa6.98□□□□□ -1.29
PSEN1-220ENST00000557037 CTAG1AP78358 180 aa6.98□□□□□ -1.29
PSEN1-220ENST00000557037 SERF2P84101 59 aa6.98□□□□□ -1.29
PSEN1-220ENST00000557037 MRAP2Q96G30 205 aa6.98□□□□□ -1.29
PSEN1-220ENST00000557037 C22orf24Q9Y442 160 aa6.98□□□□□ -1.29
PSEN1-220ENST00000557037 I3L3M4 83 aa6.97□□□□□ -1.29
PSEN1-220ENST00000557037 PET100P0DJ07 73 aa6.97□□□□□ -1.29
PSEN1-220ENST00000557037 CTRLP40313 264 aa6.97□□□□□ -1.29
PSEN1-220ENST00000557037 MRPL52Q86TS9 123 aaKnown RBP6.97□□□□□ -1.29
PSEN1-220ENST00000557037 TMEM242Q9NWH2 141 aa6.97□□□□□ -1.29
PSEN1-220ENST00000557037 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.29
PSEN1-220ENST00000557037 F8WDY8 70 aa6.96□□□□□ -1.3
PSEN1-220ENST00000557037 LYZL1Q6UWQ5 148 aa6.96□□□□□ -1.3
PSEN1-220ENST00000557037 C3orf22Q8N5N4 141 aa6.96□□□□□ -1.3
PSEN1-220ENST00000557037 UBE2D4Q9Y2X8 147 aa6.96□□□□□ -1.3
PSEN1-220ENST00000557037 S100A9P06702 114 aaKnown RBP6.95□□□□□ -1.3
PSEN1-220ENST00000557037 LBHQ53QV2 105 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-220ENST00000557037 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
PSEN1-220ENST00000557037 A0A1B0GVG6 124 aa6.94□□□□□ -1.3
PSEN1-220ENST00000557037 FAM240BA0A1B0GVZ2 78 aa6.94□□□□□ -1.3
PSEN1-220ENST00000557037 SCO2A0A1W2PP80 73 aa6.94□□□□□ -1.3
PSEN1-220ENST00000557037 FHITP49789 147 aa6.94□□□□□ -1.3
PSEN1-220ENST00000557037 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
PSEN1-220ENST00000557037 F2Z2F3 143 aa6.93□□□□□ -1.3
PSEN1-220ENST00000557037 KRTAP4-16G5E9R7 235 aaPredicted RBP6.93□□□□□ -1.3
PSEN1-220ENST00000557037 RPS20P60866 119 aaKnown RBP6.93□□□□□ -1.3
PSEN1-220ENST00000557037 TWIST1Q15672 202 aa6.93□□□□□ -1.3
PSEN1-220ENST00000557037 XP32Q5T750 250 aa6.93□□□□□ -1.3
PSEN1-220ENST00000557037 LINC00469Q8N7U9 141 aa6.93□□□□□ -1.3
PSEN1-220ENST00000557037 RNASE7Q9H1E1 156 aaKnown RBP6.93□□□□□ -1.3
PSEN1-220ENST00000557037 MAP1LC3B2A6NCE7 125 aa6.92□□□□□ -1.3
PSEN1-220ENST00000557037 PAGE4O60829 102 aa6.92□□□□□ -1.3
PSEN1-220ENST00000557037 UBE2AP49459 152 aa6.92□□□□□ -1.3
PSEN1-220ENST00000557037 FOXA3P55318 350 aaPredicted RBP6.92□□□□□ -1.3
PSEN1-220ENST00000557037 CCDC32Q9BV29 185 aa6.92□□□□□ -1.3
PSEN1-220ENST00000557037 MAP1LC3BQ9GZQ8 125 aa6.92□□□□□ -1.3
PSEN1-220ENST00000557037 IGLV8-61A0A075B6I0 122 aa6.91□□□□□ -1.3
PSEN1-220ENST00000557037 C7orf77A4D0Y5 90 aa6.91□□□□□ -1.3
PSEN1-220ENST00000557037 RPL37AP8A6NKH3 93 aa6.91□□□□□ -1.3
PSEN1-220ENST00000557037 IFNA1P01562 189 aa6.91□□□□□ -1.3
PSEN1-220ENST00000557037 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
PSEN1-220ENST00000557037 C2orf82Q6UX34 121 aa6.91□□□□□ -1.3
PSEN1-220ENST00000557037 MARVELD1Q9BSK0 173 aa6.91□□□□□ -1.3
PSEN1-220ENST00000557037 CYTL1Q9NRR1 136 aa6.91□□□□□ -1.3
PSEN1-220ENST00000557037 Q6ZUT4 128 aa6.9□□□□□ -1.3
PSEN1-220ENST00000557037 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.3
PSEN1-220ENST00000557037 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.3
PSEN1-220ENST00000557037 KRTAP13-1Q8IUC0 172 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms