RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 CRPP02741 224 aa6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 SMR3BP02814 79 aaPredicted RBP6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 ANGP03950 147 aaKnown RBP6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 NTF3P20783 257 aa6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 HNRNPA3P51991 378 aaKnown RBP6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 MIAQ16674 131 aa6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 IQCJQ1A5X6 159 aa6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 C14orf177Q52M58 125 aa6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 MPV17L2Q567V2 206 aa6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 LYZL1Q6UWQ5 148 aa6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 Q6ZSA8 131 aa6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 DPH3P1Q9H4G8 78 aa6.42□□□□□ -1.38
HNRNPC-228ENST00000557033 VPS13BQ7Z7G8 4022 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 IGHV1-24A0A0C4DH33 117 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 TMEM250H0YL14 139 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 MGPP08493 103 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 CTRLP40313 264 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 RASL11AQ6T310 242 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 LYPD6BQ8NI32 183 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 CNFNQ9BYD5 112 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 RPP21Q9H633 154 aaKnown RBP6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 NIT2Q9NQR4 276 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 PRR34Q9NV39 138 aa6.41□□□□□ -1.38
HNRNPC-228ENST00000557033 RBX1P62877 108 aa6.4□□□□□ -1.38
HNRNPC-228ENST00000557033 K7EN84 100 aa6.39□□□□□ -1.39
HNRNPC-228ENST00000557033 NDUFS6O75380 124 aaKnown RBP6.39□□□□□ -1.39
HNRNPC-228ENST00000557033 NKX2-5P52952 324 aaPredicted RBP6.39□□□□□ -1.39
HNRNPC-228ENST00000557033 HAMPP81172 84 aa6.39□□□□□ -1.39
HNRNPC-228ENST00000557033 ALKAL2Q6UX46 152 aa6.39□□□□□ -1.39
HNRNPC-228ENST00000557033 FAM231DQ6ZW35 169 aa6.39□□□□□ -1.39
HNRNPC-228ENST00000557033 LINC00269Q8N2A0 174 aa6.39□□□□□ -1.39
HNRNPC-228ENST00000557033 PGLYRP4Q96LB8 373 aa6.39□□□□□ -1.39
HNRNPC-228ENST00000557033 RNASE7Q9H1E1 156 aaKnown RBP6.39□□□□□ -1.39
HNRNPC-228ENST00000557033 A0A087X002 238 aa6.38□□□□□ -1.39
HNRNPC-228ENST00000557033 TRAV8-4A0A0B4J246 113 aa6.38□□□□□ -1.39
HNRNPC-228ENST00000557033 TSPAN13O95857 204 aa6.38□□□□□ -1.39
HNRNPC-228ENST00000557033 FOXA3P55318 350 aaPredicted RBP6.38□□□□□ -1.39
HNRNPC-228ENST00000557033 SMIM15Q7Z3B0 74 aa6.38□□□□□ -1.39
HNRNPC-228ENST00000557033 TMEM243Q9BU79 118 aa6.38□□□□□ -1.39
HNRNPC-228ENST00000557033 KRTAP9-9Q9BYP9 154 aa6.38□□□□□ -1.39
HNRNPC-228ENST00000557033 OCR1Q9BZK8 76 aa6.38□□□□□ -1.39
HNRNPC-228ENST00000557033 A8MWL6 223 aa6.37□□□□□ -1.39
HNRNPC-228ENST00000557033 GATCO43716 136 aaKnown RBP6.37□□□□□ -1.39
HNRNPC-228ENST00000557033 REG3AQ06141 175 aa6.37□□□□□ -1.39
HNRNPC-228ENST00000557033 TEX261Q6UWH6 196 aa6.37□□□□□ -1.39
HNRNPC-228ENST00000557033 GTSF1Q8WW33 167 aa6.37□□□□□ -1.39
HNRNPC-228ENST00000557033 IGLV4-3A0A075B6K6 122 aa6.36□□□□□ -1.39
HNRNPC-228ENST00000557033 E9PLD3 99 aa6.36□□□□□ -1.39
HNRNPC-228ENST00000557033 COTL1Q14019 142 aa6.36□□□□□ -1.39
HNRNPC-228ENST00000557033 KRTAP26-1Q6PEX3 210 aa6.36□□□□□ -1.39
HNRNPC-228ENST00000557033 GATD1Q8NB37 220 aa6.36□□□□□ -1.39
HNRNPC-228ENST00000557033 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
HNRNPC-228ENST00000557033 CHAC1Q9BUX1 264 aa6.36□□□□□ -1.39
HNRNPC-228ENST00000557033 EIF5A2Q9GZV4 153 aaKnown RBP6.36□□□□□ -1.39
HNRNPC-228ENST00000557033 HSBP1L1C9JCN9 74 aa6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 UBE2L6O14933 153 aa6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 NCR2O95944 276 aa6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 HLA-DQA1P01909 254 aa6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 SCXQ7RTU7 201 aa6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 BORCS7Q96B45 105 aa6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 FAM210AQ96ND0 272 aa6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 KRTAP9-2Q9BYQ4 174 aa6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 SRRM2Q9UQ35 2752 aaKnown RBP6.35□□□□□ -1.39
HNRNPC-228ENST00000557033 IGLV4-60A0A075B6I1 120 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 A0A1B0GWB2 263 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 FAM231BA6NCW3 169 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 RPL37AP8A6NKH3 93 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 H7C423 109 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 CEBPGP53567 150 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 CLPSL2Q6UWE3 100 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 C9orf163Q8N9P6 203 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 SMIM7Q9BQ49 75 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 KRTAP4-12Q9BQ66 201 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 GFRA4Q9GZZ7 299 aa6.34□□□□□ -1.39
HNRNPC-228ENST00000557033 TRAV26-2A0A0B4J265 109 aa6.33□□□□□ -1.4
HNRNPC-228ENST00000557033 ZNF727A8MUV8 499 aa6.33□□□□□ -1.4
HNRNPC-228ENST00000557033 LINC01551Q86U37 167 aa6.33□□□□□ -1.4
HNRNPC-228ENST00000557033 CIRBP-AS1Q8TBR5 109 aa6.33□□□□□ -1.4
HNRNPC-228ENST00000557033 TSKUQ8WUA8 353 aa6.33□□□□□ -1.4
HNRNPC-228ENST00000557033 OSTCQ9NRP0 149 aa6.33□□□□□ -1.4
HNRNPC-228ENST00000557033 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
HNRNPC-228ENST00000557033 TRBV6-5A0A0K0K1A5 114 aa6.32□□□□□ -1.4
HNRNPC-228ENST00000557033 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
HNRNPC-228ENST00000557033 SRP19P09132 144 aaKnown RBP6.32□□□□□ -1.4
HNRNPC-228ENST00000557033 DEFB104AQ8WTQ1 72 aa6.32□□□□□ -1.4
HNRNPC-228ENST00000557033 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
HNRNPC-228ENST00000557033 TMEM191AQ9H0A3 160 aa6.32□□□□□ -1.4
HNRNPC-228ENST00000557033 HERC1Q15751 4861 aa6.32□□□□□ -1.4
HNRNPC-228ENST00000557033 SDHAF1A6NFY7 115 aa6.31□□□□□ -1.4
HNRNPC-228ENST00000557033 HIGD1CA8MV81 97 aa6.31□□□□□ -1.4
HNRNPC-228ENST00000557033 I3L3M4 83 aa6.31□□□□□ -1.4
HNRNPC-228ENST00000557033 APCSP02743 223 aa6.31□□□□□ -1.4
HNRNPC-228ENST00000557033 PMCHP20382 165 aa6.31□□□□□ -1.4
HNRNPC-228ENST00000557033 CNBPP62633 177 aaKnown RBP6.31□□□□□ -1.4
HNRNPC-228ENST00000557033 AMMECR1LQ6DCA0 310 aa6.31□□□□□ -1.4
HNRNPC-228ENST00000557033 REG3GQ6UW15 175 aa6.31□□□□□ -1.4
HNRNPC-228ENST00000557033 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-228ENST00000557033 TMEM241Q24JQ0 296 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms