RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 FAM92AA1XBS5 289 aa-2.9□□□□□ -2.87
LINC00648-203ENST00000556923 DPM2O94777 84 aa-2.9□□□□□ -2.87
LINC00648-203ENST00000556923 SPRR1BP22528 89 aa-2.9□□□□□ -2.87
LINC00648-203ENST00000556923 UBE2D1P51668 147 aa-2.9□□□□□ -2.87
LINC00648-203ENST00000556923 PCBD2Q9H0N5 130 aa-2.9□□□□□ -2.87
LINC00648-203ENST00000556923 J3KT08 172 aa-2.91□□□□□ -2.88
LINC00648-203ENST00000556923 LINC01545Q5VT33 79 aa-2.91□□□□□ -2.88
LINC00648-203ENST00000556923 TRBV6-1A0A0K0K1D8 114 aa-2.92□□□□□ -2.88
LINC00648-203ENST00000556923 S100A3P33764 101 aa-2.92□□□□□ -2.88
LINC00648-203ENST00000556923 C10orf82Q8WW14 230 aa-2.92□□□□□ -2.88
LINC00648-203ENST00000556923 ZFHX4Q86UP3 3567 aa-2.92□□□□□ -2.88
LINC00648-203ENST00000556923 BPTFQ12830 3046 aa-2.93□□□□□ -2.88
LINC00648-203ENST00000556923 SMIM6P0DI80 62 aa-2.93□□□□□ -2.88
LINC00648-203ENST00000556923 TMEM244Q5VVB8 128 aa-2.93□□□□□ -2.88
LINC00648-203ENST00000556923 TMEM35BQ8NCS4 154 aa-2.93□□□□□ -2.88
LINC00648-203ENST00000556923 LSM2Q9Y333 95 aaKnown RBP-2.93□□□□□ -2.88
LINC00648-203ENST00000556923 KNDC1Q76NI1 1749 aa-2.93□□□□□ -2.88
LINC00648-203ENST00000556923 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.94□□□□□ -2.88
LINC00648-203ENST00000556923 MT1EP04732 61 aa-2.94□□□□□ -2.88
LINC00648-203ENST00000556923 FXYD6Q9H0Q3 95 aa-2.94□□□□□ -2.88
LINC00648-203ENST00000556923 LINC00472Q9H8W2 130 aa-2.94□□□□□ -2.88
LINC00648-203ENST00000556923 FAM186AA6NE01 2351 aa-2.94□□□□□ -2.88
LINC00648-203ENST00000556923 MYH13Q9UKX3 1938 aa-2.95□□□□□ -2.88
LINC00648-203ENST00000556923 ERCC6Q03468 1493 aa-2.95□□□□□ -2.88
LINC00648-203ENST00000556923 SPINK4O60575 86 aa-2.95□□□□□ -2.88
LINC00648-203ENST00000556923 TOMM20LQ6UXN7 152 aa-2.95□□□□□ -2.88
LINC00648-203ENST00000556923 OR8I2Q8N0Y5 310 aa-2.95□□□□□ -2.88
LINC00648-203ENST00000556923 MT1LQ93083 61 aa-2.95□□□□□ -2.88
LINC00648-203ENST00000556923 PDE4DIPQ5VU43 2346 aa-2.96□□□□□ -2.88
LINC00648-203ENST00000556923 PAPPAQ13219 1627 aa-2.96□□□□□ -2.88
LINC00648-203ENST00000556923 TMEM128Q5BJH2 165 aa-2.96□□□□□ -2.88
LINC00648-203ENST00000556923 CASKIN1Q8WXD9 1431 aa-2.96□□□□□ -2.88
LINC00648-203ENST00000556923 ADGRB1O14514 1584 aa-2.96□□□□□ -2.88
LINC00648-203ENST00000556923 TLN2Q9Y4G6 2542 aa-2.97□□□□□ -2.88
LINC00648-203ENST00000556923 G0S2P27469 103 aa-2.97□□□□□ -2.88
LINC00648-203ENST00000556923 SAMD13Q5VXD3 122 aa-2.97□□□□□ -2.88
LINC00648-203ENST00000556923 RPRMQ9NS64 109 aa-2.97□□□□□ -2.88
LINC00648-203ENST00000556923 PIGYQ3MUY2 71 aa-2.98□□□□□ -2.89
LINC00648-203ENST00000556923 C9orf116Q5BN46 136 aaPredicted RBP-2.98□□□□□ -2.89
LINC00648-203ENST00000556923 LRRC37A3O60309 1634 aa-2.99□□□□□ -2.89
LINC00648-203ENST00000556923 COX6B1P14854 86 aa-2.99□□□□□ -2.89
LINC00648-203ENST00000556923 WDR7Q9Y4E6 1490 aa-2.99□□□□□ -2.89
LINC00648-203ENST00000556923 PRUNE2Q8WUY3 3088 aa-3□□□□□ -2.89
LINC00648-203ENST00000556923 SMR3BP02814 79 aaPredicted RBP-3□□□□□ -2.89
LINC00648-203ENST00000556923 SPANXN1Q5VSR9 72 aa-3.01□□□□□ -2.89
LINC00648-203ENST00000556923 SDF2Q99470 211 aa-3.01□□□□□ -2.89
LINC00648-203ENST00000556923 CEP290O15078 2479 aa-3.02□□□□□ -2.89
LINC00648-203ENST00000556923 RPS28P62857 69 aaKnown RBP-3.02□□□□□ -2.89
LINC00648-203ENST00000556923 MYH8P13535 1937 aa-3.03□□□□□ -2.89
LINC00648-203ENST00000556923 E2F6O75461 281 aa-3.03□□□□□ -2.89
LINC00648-203ENST00000556923 VSTM2AQ8TAG5 236 aa-3.03□□□□□ -2.89
LINC00648-203ENST00000556923 MAGOHBQ96A72 148 aaKnown RBP-3.03□□□□□ -2.89
LINC00648-203ENST00000556923 RANBP2P49792 3224 aaKnown RBP-3.03□□□□□ -2.89
LINC00648-203ENST00000556923 E5RI56 91 aa-3.04□□□□□ -2.9
LINC00648-203ENST00000556923 PIRTP0C851 137 aa-3.04□□□□□ -2.9
LINC00648-203ENST00000556923 GNG10P50151 68 aa-3.04□□□□□ -2.9
LINC00648-203ENST00000556923 ANKRD50Q9ULJ7 1429 aa-3.04□□□□□ -2.9
LINC00648-203ENST00000556923 ADAMTS12P58397 1594 aa-3.04□□□□□ -2.9
LINC00648-203ENST00000556923 LRRC37A2A6NM11 1700 aa-3.05□□□□□ -2.9
LINC00648-203ENST00000556923 PRDM2Q13029 1718 aa-3.05□□□□□ -2.9
LINC00648-203ENST00000556923 H0YGG7 62 aa-3.05□□□□□ -2.9
LINC00648-203ENST00000556923 H0YJX3 145 aa-3.05□□□□□ -2.9
LINC00648-203ENST00000556923 IFNA17P01571 189 aa-3.05□□□□□ -2.9
LINC00648-203ENST00000556923 RPL7L1Q6DKI1 246 aaKnown RBP-3.05□□□□□ -2.9
LINC00648-203ENST00000556923 PPP1R2P3Q6NXS1 205 aa-3.05□□□□□ -2.9
LINC00648-203ENST00000556923 GOLGA4Q13439 2230 aaKnown RBP-3.05□□□□□ -2.9
LINC00648-203ENST00000556923 TRBV20-1A0A075B6N2 111 aa-3.06□□□□□ -2.9
LINC00648-203ENST00000556923 CCL18P55774 89 aa-3.06□□□□□ -2.9
LINC00648-203ENST00000556923 UBE2G1P62253 170 aa-3.06□□□□□ -2.9
LINC00648-203ENST00000556923 PTPN23Q9H3S7 1636 aa-3.07□□□□□ -2.9
LINC00648-203ENST00000556923 A6NIN4 97 aa-3.07□□□□□ -2.9
LINC00648-203ENST00000556923 ZNF818PQ6ZRF7 136 aa-3.07□□□□□ -2.9
LINC00648-203ENST00000556923 DEFB105AQ8NG35 78 aa-3.07□□□□□ -2.9
LINC00648-203ENST00000556923 S4R3F8 94 aa-3.07□□□□□ -2.9
LINC00648-203ENST00000556923 ZNF236Q9UL36 1845 aa-3.07□□□□□ -2.9
LINC00648-203ENST00000556923 TRAV36DV7A0A075B6V5 113 aa-3.08□□□□□ -2.9
LINC00648-203ENST00000556923 C9orf92A6NGG3 77 aa-3.08□□□□□ -2.9
LINC00648-203ENST00000556923 TNFSF15O95150 251 aa-3.08□□□□□ -2.9
LINC00648-203ENST00000556923 SCTP09683 121 aa-3.08□□□□□ -2.9
LINC00648-203ENST00000556923 MIC13Q5XKP0 118 aa-3.08□□□□□ -2.9
LINC00648-203ENST00000556923 TFAMQ00059 246 aaKnown RBP-3.09□□□□□ -2.9
LINC00648-203ENST00000556923 SMPXQ9UHP9 88 aa-3.09□□□□□ -2.9
LINC00648-203ENST00000556923 LINC00312Q9Y6C7 94 aa-3.09□□□□□ -2.9
LINC00648-203ENST00000556923 FREM2Q5SZK8 3169 aa-3.09□□□□□ -2.9
LINC00648-203ENST00000556923 CDC42BPGQ6DT37 1551 aa-3.09□□□□□ -2.9
LINC00648-203ENST00000556923 H1FX-AS1Q4G0G2 97 aa-3.1□□□□□ -2.91
LINC00648-203ENST00000556923 TCTE3Q8IZS6 198 aa-3.1□□□□□ -2.91
LINC00648-203ENST00000556923 C9orf62Q8N4C0 152 aa-3.1□□□□□ -2.91
LINC00648-203ENST00000556923 SMIM4Q8WVI0 70 aa-3.1□□□□□ -2.91
LINC00648-203ENST00000556923 SYNJ1O43426 1573 aa-3.1□□□□□ -2.91
LINC00648-203ENST00000556923 SLIT1O75093 1534 aa-3.1□□□□□ -2.91
LINC00648-203ENST00000556923 DOCK1Q14185 1865 aa-3.11□□□□□ -2.91
LINC00648-203ENST00000556923 CDC26Q8NHZ8 85 aa-3.11□□□□□ -2.91
LINC00648-203ENST00000556923 HIGD1AQ9Y241 93 aa-3.11□□□□□ -2.91
LINC00648-203ENST00000556923 NCR2O95944 276 aa-3.12□□□□□ -2.91
LINC00648-203ENST00000556923 S100GP29377 79 aa-3.12□□□□□ -2.91
LINC00648-203ENST00000556923 CMPK1P30085 196 aa-3.12□□□□□ -2.91
LINC00648-203ENST00000556923 DEFB110Q30KQ9 67 aa-3.12□□□□□ -2.91
LINC00648-203ENST00000556923 A0A1B0GV72 72 aa-3.13□□□□□ -2.91
LINC00648-203ENST00000556923 A0A1B0GX51 115 aa-3.13□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms