RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 COLCA2A8K830 154 aa11.73□□□□□ -0.53
PSEN1-218ENST00000556864 ENHOQ6UWT2 76 aa11.73□□□□□ -0.53
PSEN1-218ENST00000556864 DNAH2Q9P225 4427 aa11.72□□□□□ -0.53
PSEN1-218ENST00000556864 TRAV8-4A0A0B4J246 113 aa11.72□□□□□ -0.53
PSEN1-218ENST00000556864 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
PSEN1-218ENST00000556864 RAB5BP61020 215 aa11.71□□□□□ -0.53
PSEN1-218ENST00000556864 RPL39P62891 51 aaKnown RBP11.71□□□□□ -0.53
PSEN1-218ENST00000556864 C2orf66Q6UXQ4 117 aa11.71□□□□□ -0.53
PSEN1-218ENST00000556864 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
PSEN1-218ENST00000556864 EREGO14944 169 aa11.7□□□□□ -0.54
PSEN1-218ENST00000556864 TNP2Q05952 138 aa11.7□□□□□ -0.54
PSEN1-218ENST00000556864 ZNF664Q8N3J9 261 aa11.7□□□□□ -0.54
PSEN1-218ENST00000556864 LINC01546A6NGU7 62 aa11.69□□□□□ -0.54
PSEN1-218ENST00000556864 TRGC2P03986 189 aa11.69□□□□□ -0.54
PSEN1-218ENST00000556864 Q6ZUT4 128 aa11.69□□□□□ -0.54
PSEN1-218ENST00000556864 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
PSEN1-218ENST00000556864 AP5S1Q9NUS5 200 aa11.69□□□□□ -0.54
PSEN1-218ENST00000556864 PYGO1Q9Y3Y4 419 aa11.69□□□□□ -0.54
PSEN1-218ENST00000556864 IGKV3OR2-268A0A0C4DH90 116 aa11.68□□□□□ -0.54
PSEN1-218ENST00000556864 MRPS36P82909 103 aaKnown RBP11.68□□□□□ -0.54
PSEN1-218ENST00000556864 NPSP0C0P6 89 aa11.67□□□□□ -0.54
PSEN1-218ENST00000556864 FRAS1Q86XX4 4008 aa11.67□□□□□ -0.54
PSEN1-218ENST00000556864 DNAH17Q9UFH2 4485 aa11.67□□□□□ -0.54
PSEN1-218ENST00000556864 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
PSEN1-218ENST00000556864 LINC00614P0C842 121 aa11.66□□□□□ -0.54
PSEN1-218ENST00000556864 Q6ZN92 141 aa11.66□□□□□ -0.54
PSEN1-218ENST00000556864 A0A087WTM6 91 aa11.65□□□□□ -0.54
PSEN1-218ENST00000556864 CCL25O15444 150 aa11.65□□□□□ -0.54
PSEN1-218ENST00000556864 SS18Q15532 418 aa11.65□□□□□ -0.54
PSEN1-218ENST00000556864 PAPPA-AS1Q5QFB9 102 aa11.65□□□□□ -0.54
PSEN1-218ENST00000556864 TOMM6Q96B49 74 aa11.65□□□□□ -0.54
PSEN1-218ENST00000556864 TMEM141Q96I45 108 aa11.65□□□□□ -0.54
PSEN1-218ENST00000556864 CHCHD10Q8WYQ3 142 aaPredicted RBP11.64□□□□□ -0.55
PSEN1-218ENST00000556864 CHCHD1Q96BP2 118 aaKnown RBP11.64□□□□□ -0.55
PSEN1-218ENST00000556864 TIMM17AQ99595 171 aa11.64□□□□□ -0.55
PSEN1-218ENST00000556864 IGLV4-3A0A075B6K6 122 aa11.63□□□□□ -0.55
PSEN1-218ENST00000556864 LINC00959A0A1B0GUT2 108 aa11.63□□□□□ -0.55
PSEN1-218ENST00000556864 IFITM10A6NMD0 228 aa11.63□□□□□ -0.55
PSEN1-218ENST00000556864 RNASE13Q5GAN3 156 aaKnown RBP11.63□□□□□ -0.55
PSEN1-218ENST00000556864 BAGE3Q86Y29 109 aa11.63□□□□□ -0.55
PSEN1-218ENST00000556864 C2orf88Q9BSF0 95 aa11.63□□□□□ -0.55
PSEN1-218ENST00000556864 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
PSEN1-218ENST00000556864 GAGE12HA6NDE8 117 aa11.62□□□□□ -0.55
PSEN1-218ENST00000556864 C1orf196B1AJZ1 125 aa11.62□□□□□ -0.55
PSEN1-218ENST00000556864 HBDP02042 147 aa11.62□□□□□ -0.55
PSEN1-218ENST00000556864 C14orf177Q52M58 125 aa11.62□□□□□ -0.55
PSEN1-218ENST00000556864 TEX43Q6ZNM6 134 aa11.62□□□□□ -0.55
PSEN1-218ENST00000556864 SCGB3A1Q96QR1 104 aa11.62□□□□□ -0.55
PSEN1-218ENST00000556864 TRAV13-1A0A0B4J241 112 aa11.61□□□□□ -0.55
PSEN1-218ENST00000556864 A0A1B0GVY2 172 aa11.61□□□□□ -0.55
PSEN1-218ENST00000556864 IGIPA6NJ69 53 aa11.61□□□□□ -0.55
PSEN1-218ENST00000556864 ERASQ7Z444 233 aa11.61□□□□□ -0.55
PSEN1-218ENST00000556864 BAALCQ8WXS3 180 aa11.61□□□□□ -0.55
PSEN1-218ENST00000556864 URB1-AS1Q96HZ7 61 aa11.61□□□□□ -0.55
PSEN1-218ENST00000556864 FAT2Q9NYQ8 4349 aa11.6□□□□□ -0.55
PSEN1-218ENST00000556864 XCL1P47992 114 aa11.6□□□□□ -0.55
PSEN1-218ENST00000556864 KRTAP26-1Q6PEX3 210 aa11.6□□□□□ -0.55
PSEN1-218ENST00000556864 OPRPNQ99935 248 aaPredicted RBP11.6□□□□□ -0.55
PSEN1-218ENST00000556864 HSBP1O75506 76 aa11.59□□□□□ -0.55
PSEN1-218ENST00000556864 MAPKAPK5-AS1Q8N8E1 139 aa11.59□□□□□ -0.55
PSEN1-218ENST00000556864 VCX2Q9H322 139 aa11.59□□□□□ -0.55
PSEN1-218ENST00000556864 LECT2O14960 151 aa11.58□□□□□ -0.56
PSEN1-218ENST00000556864 CD164L2Q6UWJ8 174 aa11.58□□□□□ -0.56
PSEN1-218ENST00000556864 Q8N814 137 aa11.58□□□□□ -0.56
PSEN1-218ENST00000556864 FAM104AQ969W3 186 aa11.58□□□□□ -0.56
PSEN1-218ENST00000556864 USP17L23D6RBM5 183 aa11.57□□□□□ -0.56
PSEN1-218ENST00000556864 WFDC2Q14508 124 aa11.57□□□□□ -0.56
PSEN1-218ENST00000556864 CDPF1Q6NVV7 123 aa11.57□□□□□ -0.56
PSEN1-218ENST00000556864 CFAP161Q6P656 301 aa11.57□□□□□ -0.56
PSEN1-218ENST00000556864 SPATA12Q7Z6I5 190 aa11.57□□□□□ -0.56
PSEN1-218ENST00000556864 NTN5Q8WTR8 489 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-218ENST00000556864 A0A096LNJ9 63 aa11.56□□□□□ -0.56
PSEN1-218ENST00000556864 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-218ENST00000556864 ATP5LO75964 103 aa11.56□□□□□ -0.56
PSEN1-218ENST00000556864 FOXI1Q12951 378 aa11.56□□□□□ -0.56
PSEN1-218ENST00000556864 PMCHL1Q16048 86 aa11.56□□□□□ -0.56
PSEN1-218ENST00000556864 AMELXQ99217 191 aa11.56□□□□□ -0.56
PSEN1-218ENST00000556864 COX7A2LO14548 114 aa11.55□□□□□ -0.56
PSEN1-218ENST00000556864 SERF1AO75920 110 aa11.55□□□□□ -0.56
PSEN1-218ENST00000556864 HECTD4Q9Y4D8 3996 aa11.54□□□□□ -0.56
PSEN1-218ENST00000556864 SEC11AP67812 179 aa11.54□□□□□ -0.56
PSEN1-218ENST00000556864 PDZD11Q5EBL8 140 aa11.54□□□□□ -0.56
PSEN1-218ENST00000556864 LINC00173Q6ZV60 143 aa11.54□□□□□ -0.56
PSEN1-218ENST00000556864 PGPEP1Q9NXJ5 209 aa11.54□□□□□ -0.56
PSEN1-218ENST00000556864 HIST1H2BKO60814 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST1H2BJP06899 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 MALP21145 153 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST1H2BOP23527 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST1H2BBP33778 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 UBE2D1P51668 147 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST1H2BDP58876 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST1H2BCP62807 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST2H2BEQ16778 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST1H2BHQ93079 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST1H2BNQ99877 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 HIST1H2BMQ99879 126 aa11.53□□□□□ -0.56
PSEN1-218ENST00000556864 EPPK1P58107 5090 aaKnown RBP11.53□□□□□ -0.56
PSEN1-218ENST00000556864 IGLV5-52A0A0A0MRZ9 124 aa11.52□□□□□ -0.57
PSEN1-218ENST00000556864 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms