RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 STAG3L3P0CL85 134 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 SMIM17P0DL12 118 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 DEFA1P59665 94 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 DEFA3P59666 94 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 RAB4BP61018 213 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 UBE2G1P62253 170 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 SERF2P84101 59 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 KIAA0087Q14695 138 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 ZNF56Q15929 161 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 SFRP2Q96HF1 295 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 ZFP30Q9Y2G7 519 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 ARL2-SNX15V9GYD0 113 aa2.97□□□□□ -1.93
HIF1A-209ENST00000556827 IGHV3-64A0A075B6Q5 118 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 BORCS7-ASMTA0A0B4J1R7 106 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 GRIFINA4D1Z8 144 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 KRBOX1C9JBD0 128 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 PEX7O00628 323 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 PTTG1O95997 202 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 LINC00694P0DN24 101 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 RPL13AP40429 203 aaKnown RBP2.96□□□□□ -1.94
HIF1A-209ENST00000556827 H2BFSP57053 126 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 KRTAP10-4P60372 401 aaPredicted RBP2.96□□□□□ -1.94
HIF1A-209ENST00000556827 ENHOQ6UWT2 76 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 LINC00299Q6ZSB3 139 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 C9orf163Q8N9P6 203 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 INO80EQ8NBZ0 244 aaPredicted RBP2.96□□□□□ -1.94
HIF1A-209ENST00000556827 HIST1H2BAQ96A08 127 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 FMC1Q96HJ9 113 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 PSMG3Q9BT73 122 aaPredicted RBP2.96□□□□□ -1.94
HIF1A-209ENST00000556827 ZNF471Q9BX82 626 aaPredicted RBP2.96□□□□□ -1.94
HIF1A-209ENST00000556827 TNFSF18Q9UNG2 199 aa2.96□□□□□ -1.94
HIF1A-209ENST00000556827 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
HIF1A-209ENST00000556827 IGLV4-69A0A075B6H9 119 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 TRBV25-1A0A075B6N4 114 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 TMSB15BA0A087X1C1 80 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 TRAV8-4A0A0B4J246 113 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 H7C1H1 209 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 SH2D1AO60880 128 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 P01737 135 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 GZMBP10144 247 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 ATP6V0CP27449 155 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 NMUP48645 174 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 UBE2G2P60604 165 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 UBE2D3P61077 147 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 UBE2D2P62837 147 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 MPV17L2Q567V2 206 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 DNLZQ5SXM8 178 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 AKR1C8PQ5T2L2 129 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 SPANXN1Q5VSR9 72 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 LINC01551Q86U37 167 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 LINC00269Q8N2A0 174 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 STOML3Q8TAV4 291 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 SUN5Q8TC36 379 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 DNAJC30Q96LL9 226 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 TCEAL7Q9BRU2 100 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 DERL1Q9BUN8 251 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 WFDC1Q9HC57 220 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 PKIGQ9Y2B9 76 aa2.95□□□□□ -1.94
HIF1A-209ENST00000556827 IGLV10-54A0A075B6I4 117 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 IGHV1-24A0A0C4DH33 117 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 CTXND1A0A1B0GTU2 59 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 UBE2L6O14933 153 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 UPK1BO75841 260 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 S100A9P06702 114 aaKnown RBP2.94□□□□□ -1.94
HIF1A-209ENST00000556827 SULT1A2P50226 295 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 HERVK_113P61574 105 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 CNBPP62633 177 aaKnown RBP2.94□□□□□ -1.94
HIF1A-209ENST00000556827 RBX1P62877 108 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 CLPSL2Q6UWE3 100 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 SDIM1Q6ZPB5 146 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 Q86TA4 180 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 MARVELD1Q9BSK0 173 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 CYTL1Q9NRR1 136 aa2.94□□□□□ -1.94
HIF1A-209ENST00000556827 DYNC1H1Q14204 4646 aaKnown RBP2.94□□□□□ -1.94
HIF1A-209ENST00000556827 TRBV6-1A0A0K0K1D8 114 aa2.93□□□□□ -1.94
HIF1A-209ENST00000556827 LTAP01374 205 aa2.93□□□□□ -1.94
HIF1A-209ENST00000556827 AKR1C3P42330 323 aa2.93□□□□□ -1.94
HIF1A-209ENST00000556827 RAB5CP51148 216 aa2.93□□□□□ -1.94
HIF1A-209ENST00000556827 AP1S3Q96PC3 154 aa2.93□□□□□ -1.94
HIF1A-209ENST00000556827 AQP10Q96PS8 301 aa2.93□□□□□ -1.94
HIF1A-209ENST00000556827 TMEM243Q9BU79 118 aa2.93□□□□□ -1.94
HIF1A-209ENST00000556827 LINC00474Q9P2X8 69 aa2.93□□□□□ -1.94
HIF1A-209ENST00000556827 XKRY2A2RUG3 117 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 PFDN1O60925 122 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 MGPP08493 103 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 OR5AL1P0C617 328 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 MT1HL1P0DM35 61 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 CRIP1P50238 77 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 CIRBPQ14011 172 aaKnown RBP2.92□□□□□ -1.94
HIF1A-209ENST00000556827 IQCJQ1A5X6 159 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 MAJINQ3KP22 176 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 AMMECR1LQ6DCA0 310 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 UQCC3Q6UW78 93 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 BAGE2Q86Y30 109 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 LINC01600Q96MT4 127 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 MED28Q9H204 178 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 VAX2Q9UIW0 290 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 APOBP04114 4563 aaKnown RBP2.92□□□□□ -1.94
HIF1A-209ENST00000556827 LRP1BQ9NZR2 4599 aa2.92□□□□□ -1.94
HIF1A-209ENST00000556827 HERC1Q15751 4861 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms