RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 H3BMM0 161 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 HBDP02042 147 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 PRB4P10163 310 aaPredicted RBP3.6□□□□□ -1.83
SRP54-211ENST00000556445 CD28P10747 220 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 RNASE3P12724 160 aaKnown RBP3.6□□□□□ -1.83
SRP54-211ENST00000556445 FCER1GP30273 86 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 IFI27P40305 119 aaPredicted RBP3.6□□□□□ -1.83
SRP54-211ENST00000556445 DEFA6Q01524 100 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 DEFB136Q30KP8 78 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 PRR9Q5T870 116 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 C2orf66Q6UXQ4 117 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 SPATA12Q7Z6I5 190 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 ZNF664Q8N3J9 261 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 Q8N8P6 123 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 LINC00467Q9BRT7 94 aa3.6□□□□□ -1.83
SRP54-211ENST00000556445 HIVEP2P31629 2446 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 CCDC168Q8NDH2 2452 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 IGLV8-61A0A075B6I0 122 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 TRAV12-3A0A0B4J271 114 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 MUC21A0A0G2JKD1 596 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 MUC21A0A140T8X8 626 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 SYS1-DBNDD2H3BUS1 97 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 GNRH2O43555 120 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 NPYP01303 97 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 INSP01308 110 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 EVI2AP22794 236 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 INSL3P51460 131 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 CKS1BP61024 79 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 ORMDL2Q53FV1 153 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 AMTNQ6UX39 209 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 ZNF705AQ6ZN79 300 aaPredicted RBP3.59□□□□□ -1.83
SRP54-211ENST00000556445 POM121L12Q8N7R1 296 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 Q8NBF4 154 aa3.59□□□□□ -1.83
SRP54-211ENST00000556445 TIMM8BQ9Y5J9 83 aaPredicted RBP3.59□□□□□ -1.83
SRP54-211ENST00000556445 UTP20O75691 2785 aaKnown RBP3.58□□□□□ -1.84
SRP54-211ENST00000556445 A0A087X002 238 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 TRAV26-2A0A0B4J265 109 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 A8MWV9 139 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 NCR2O95944 276 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 DEFB1P60022 68 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 HERVK_113P61574 105 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 CXCL6P80162 114 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 SPINK13Q1W4C9 94 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 LGALS9BQ3B8N2 356 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 LINC01545Q5VT33 79 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 LGALS9CQ6DKI2 356 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 FAM19A3Q7Z5A8 133 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 FAM104AQ969W3 186 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 IFI27L1Q96BM0 104 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 MIEN1Q9BRT3 115 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 SMIM2Q9BVW6 85 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 PRO1933Q9H354 126 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 ST20Q9HBF5 79 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 UQCR10Q9UDW1 63 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 ITPR3Q14573 2671 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 RELNP78509 3460 aa3.58□□□□□ -1.84
SRP54-211ENST00000556445 A0A087WX48 190 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 TRBV6-5A0A0K0K1A5 114 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 KNCNA6PVL3 124 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 M0R2P5 195 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 DLEU1O43261 78 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 IGLV1-51P01701 117 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 MGPP08493 103 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 MP68P56378 58 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 SPATA45Q537H7 98 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 MORN3Q6PF18 240 aaPredicted RBP3.57□□□□□ -1.84
SRP54-211ENST00000556445 C14orf178Q8N769 122 aaPredicted RBP3.57□□□□□ -1.84
SRP54-211ENST00000556445 Q8N976 141 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 CHD6Q8TD26 2715 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 C18orf15Q96N68 181 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 PMCHL2Q9BQD1 86 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 COL12A1Q99715 3063 aa3.57□□□□□ -1.84
SRP54-211ENST00000556445 TLN2Q9Y4G6 2542 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 SONP18583 2426 aaKnown RBP3.56□□□□□ -1.84
SRP54-211ENST00000556445 APCP25054 2843 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 HELZ2Q9BYK8 2649 aaKnown RBP3.56□□□□□ -1.84
SRP54-211ENST00000556445 IGLV2-18A0A075B6J9 118 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 TRAV12-2A0A075B6T6 113 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.56□□□□□ -1.84
SRP54-211ENST00000556445 DAZ2Q13117 558 aaKnown RBP3.56□□□□□ -1.84
SRP54-211ENST00000556445 ZNF56Q15929 161 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 Q6ZQT7 251 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 DAZ4Q86SG3 579 aaKnown RBP3.56□□□□□ -1.84
SRP54-211ENST00000556445 C7orf33Q8WU49 177 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 TMEM158Q8WZ71 300 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 VSIG2Q96IQ7 327 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 SMR3AQ99954 134 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 DAZ3Q9NR90 486 aaKnown RBP3.56□□□□□ -1.84
SRP54-211ENST00000556445 KIF25-AS1Q9Y6Z4 181 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 SORL1Q92673 2214 aa3.56□□□□□ -1.84
SRP54-211ENST00000556445 FLNAP21333 2647 aaKnown RBP3.56□□□□□ -1.84
SRP54-211ENST00000556445 MYO9AB2RTY4 2548 aa3.55□□□□□ -1.84
SRP54-211ENST00000556445 TACC2O95359 2948 aa3.55□□□□□ -1.84
SRP54-211ENST00000556445 AGRNO00468 2067 aa3.55□□□□□ -1.84
SRP54-211ENST00000556445 A0A096LNJ9 63 aa3.55□□□□□ -1.84
SRP54-211ENST00000556445 TRAV12-1A0A0B4J245 112 aa3.55□□□□□ -1.84
SRP54-211ENST00000556445 M0R143 59 aa3.55□□□□□ -1.84
SRP54-211ENST00000556445 IGLC3P0DOY3 106 aa3.55□□□□□ -1.84
SRP54-211ENST00000556445 POLR2KP53803 58 aaKnown RBP3.55□□□□□ -1.84
SRP54-211ENST00000556445 RHOHQ15669 191 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms