RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 F2Z2F3 143 aa8.41□□□□□ -1.06
ACTN1-219ENST00000556432 APOMO95445 188 aa8.41□□□□□ -1.06
ACTN1-219ENST00000556432 NCR2O95944 276 aa8.41□□□□□ -1.06
ACTN1-219ENST00000556432 ZNF25P17030 456 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-219ENST00000556432 MALP21145 153 aa8.41□□□□□ -1.06
ACTN1-219ENST00000556432 RPL35P42766 123 aaKnown RBP8.41□□□□□ -1.06
ACTN1-219ENST00000556432 LYZL1Q6UWQ5 148 aa8.41□□□□□ -1.06
ACTN1-219ENST00000556432 CAMK2N2Q96S95 79 aa8.41□□□□□ -1.06
ACTN1-219ENST00000556432 CD164L2Q6UWJ8 174 aa8.4□□□□□ -1.06
ACTN1-219ENST00000556432 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
ACTN1-219ENST00000556432 TEX46H3BTG2 121 aa8.39□□□□□ -1.07
ACTN1-219ENST00000556432 IFNA1P01562 189 aa8.39□□□□□ -1.07
ACTN1-219ENST00000556432 C11orf52Q96A22 123 aa8.39□□□□□ -1.07
ACTN1-219ENST00000556432 RPL39LQ96EH5 51 aaKnown RBP8.39□□□□□ -1.07
ACTN1-219ENST00000556432 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-219ENST00000556432 RPL13AP40429 203 aaKnown RBP8.38□□□□□ -1.07
ACTN1-219ENST00000556432 MEF2BQ02080 365 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-219ENST00000556432 TWIST1Q15672 202 aa8.38□□□□□ -1.07
ACTN1-219ENST00000556432 CENPWQ5EE01 88 aa8.38□□□□□ -1.07
ACTN1-219ENST00000556432 NUP35Q8NFH5 326 aa8.38□□□□□ -1.07
ACTN1-219ENST00000556432 RAB19A4D1S5 217 aa8.37□□□□□ -1.07
ACTN1-219ENST00000556432 COX7A2LO14548 114 aa8.37□□□□□ -1.07
ACTN1-219ENST00000556432 BLOC1S1P78537 153 aa8.37□□□□□ -1.07
ACTN1-219ENST00000556432 TSKUQ8WUA8 353 aa8.37□□□□□ -1.07
ACTN1-219ENST00000556432 OPRPNQ99935 248 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-219ENST00000556432 SDHAF1A6NFY7 115 aa8.36□□□□□ -1.07
ACTN1-219ENST00000556432 TSPAN13O95857 204 aa8.36□□□□□ -1.07
ACTN1-219ENST00000556432 PMCHP20382 165 aa8.36□□□□□ -1.07
ACTN1-219ENST00000556432 TRBV20OR9-2A0A075B6H5 130 aa8.35□□□□□ -1.07
ACTN1-219ENST00000556432 KRTAP1-4P0C5Y4 121 aa8.35□□□□□ -1.07
ACTN1-219ENST00000556432 MRAP2Q96G30 205 aa8.35□□□□□ -1.07
ACTN1-219ENST00000556432 MED9Q9NWA0 146 aa8.35□□□□□ -1.07
ACTN1-219ENST00000556432 C19orf71A6NCJ1 209 aa8.34□□□□□ -1.07
ACTN1-219ENST00000556432 I3L3M4 83 aa8.34□□□□□ -1.07
ACTN1-219ENST00000556432 PDE6DO43924 150 aa8.34□□□□□ -1.07
ACTN1-219ENST00000556432 CTRLP40313 264 aa8.34□□□□□ -1.07
ACTN1-219ENST00000556432 GNG4P50150 75 aa8.34□□□□□ -1.07
ACTN1-219ENST00000556432 TEX261Q6UWH6 196 aa8.34□□□□□ -1.07
ACTN1-219ENST00000556432 SMIM15Q7Z3B0 74 aa8.34□□□□□ -1.07
ACTN1-219ENST00000556432 FAM19A5Q7Z5A7 132 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-219ENST00000556432 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
ACTN1-219ENST00000556432 TMEM242Q9NWH2 141 aa8.33□□□□□ -1.08
ACTN1-219ENST00000556432 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
ACTN1-219ENST00000556432 CEBPGP53567 150 aa8.32□□□□□ -1.08
ACTN1-219ENST00000556432 UBE2BP63146 152 aa8.32□□□□□ -1.08
ACTN1-219ENST00000556432 SPAG11BQ08648 103 aa8.32□□□□□ -1.08
ACTN1-219ENST00000556432 KRTAP11-1Q8IUC1 163 aa8.32□□□□□ -1.08
ACTN1-219ENST00000556432 CDC42SE2Q9NRR3 84 aa8.32□□□□□ -1.08
ACTN1-219ENST00000556432 C1orf196B1AJZ1 125 aa8.31□□□□□ -1.08
ACTN1-219ENST00000556432 TAGLN2P37802 199 aaKnown RBP8.31□□□□□ -1.08
ACTN1-219ENST00000556432 C5orf38Q86SI9 138 aa8.31□□□□□ -1.08
ACTN1-219ENST00000556432 FAM210AQ96ND0 272 aa8.31□□□□□ -1.08
ACTN1-219ENST00000556432 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
ACTN1-219ENST00000556432 K7EN84 100 aa8.3□□□□□ -1.08
ACTN1-219ENST00000556432 TSHBP01222 138 aa8.3□□□□□ -1.08
ACTN1-219ENST00000556432 FOXA3P55318 350 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-219ENST00000556432 EIF5A2Q9GZV4 153 aaKnown RBP8.3□□□□□ -1.08
ACTN1-219ENST00000556432 BIN3Q9NQY0 253 aa8.3□□□□□ -1.08
ACTN1-219ENST00000556432 C7orf77A4D0Y5 90 aa8.29□□□□□ -1.08
ACTN1-219ENST00000556432 C9JQL5 133 aa8.29□□□□□ -1.08
ACTN1-219ENST00000556432 ESDP10768 282 aa8.29□□□□□ -1.08
ACTN1-219ENST00000556432 SRSF3P84103 164 aaKnown RBP8.29□□□□□ -1.08
ACTN1-219ENST00000556432 RNASE13Q5GAN3 156 aaKnown RBP8.29□□□□□ -1.08
ACTN1-219ENST00000556432 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
ACTN1-219ENST00000556432 SMIM12Q96EX1 92 aa8.29□□□□□ -1.08
ACTN1-219ENST00000556432 IMMP2LQ96T52 175 aa8.29□□□□□ -1.08
ACTN1-219ENST00000556432 CNFNQ9BYD5 112 aa8.29□□□□□ -1.08
ACTN1-219ENST00000556432 M0QXV9 152 aa8.28□□□□□ -1.08
ACTN1-219ENST00000556432 SRP19P09132 144 aaKnown RBP8.28□□□□□ -1.08
ACTN1-219ENST00000556432 RNF151Q2KHN1 245 aa8.28□□□□□ -1.08
ACTN1-219ENST00000556432 ST20Q9HBF5 79 aa8.28□□□□□ -1.08
ACTN1-219ENST00000556432 CARHSP1Q9Y2V2 147 aaKnown RBP8.28□□□□□ -1.08
ACTN1-219ENST00000556432 TMEM250H0YL14 139 aa8.27□□□□□ -1.09
ACTN1-219ENST00000556432 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
ACTN1-219ENST00000556432 NUDT10Q8NFP7 164 aa8.27□□□□□ -1.09
ACTN1-219ENST00000556432 OCC1Q8TAD7 63 aa8.27□□□□□ -1.09
ACTN1-219ENST00000556432 NUDT11Q96G61 164 aa8.27□□□□□ -1.09
ACTN1-219ENST00000556432 RNASE7Q9H1E1 156 aaKnown RBP8.27□□□□□ -1.09
ACTN1-219ENST00000556432 RPP21Q9H633 154 aaKnown RBP8.27□□□□□ -1.09
ACTN1-219ENST00000556432 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
ACTN1-219ENST00000556432 ORAOV1Q8WV07 137 aa8.26□□□□□ -1.09
ACTN1-219ENST00000556432 TRBV6-5A0A0K0K1A5 114 aa8.25□□□□□ -1.09
ACTN1-219ENST00000556432 NDUFA1O15239 70 aa8.25□□□□□ -1.09
ACTN1-219ENST00000556432 FCER1GP30273 86 aa8.25□□□□□ -1.09
ACTN1-219ENST00000556432 IFITM2Q01629 132 aa8.25□□□□□ -1.09
ACTN1-219ENST00000556432 OR10D4PQ8NGN7 298 aa8.25□□□□□ -1.09
ACTN1-219ENST00000556432 SMIM7Q9BQ49 75 aa8.25□□□□□ -1.09
ACTN1-219ENST00000556432 MRPL35Q9NZE8 188 aaKnown RBP8.25□□□□□ -1.09
ACTN1-219ENST00000556432 SMAGPQ0VAQ4 97 aa8.24□□□□□ -1.09
ACTN1-219ENST00000556432 CDIP1Q9H305 208 aa8.24□□□□□ -1.09
ACTN1-219ENST00000556432 ZNF727A8MUV8 499 aa8.23□□□□□ -1.09
ACTN1-219ENST00000556432 C10orf25Q5T742 122 aa8.22□□□□□ -1.09
ACTN1-219ENST00000556432 Q6ZUT4 128 aa8.22□□□□□ -1.09
ACTN1-219ENST00000556432 LINC01551Q86U37 167 aa8.22□□□□□ -1.09
ACTN1-219ENST00000556432 RETNLBQ9BQ08 111 aa8.22□□□□□ -1.09
ACTN1-219ENST00000556432 SMDT1Q9H4I9 107 aa8.22□□□□□ -1.09
ACTN1-219ENST00000556432 F8WDY8 70 aa8.21□□□□□ -1.1
ACTN1-219ENST00000556432 ZNF861PO60384 105 aa8.21□□□□□ -1.1
ACTN1-219ENST00000556432 PEA15Q15121 130 aa8.21□□□□□ -1.1
ACTN1-219ENST00000556432 UNQ6190/PRO20217Q6UXQ8 127 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms