RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 UBE2NLQ5JXB2 153 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 MINOS1Q5TGZ0 78 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 UNQ9165/PRO28630Q6UXU0 137 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 Q6ZS49 121 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 TEN1Q86WV5 123 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 Q8N6K4 173 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 C5orf56Q8N8D9 126 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 C11orf72Q8NBR9 251 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 OR10P1Q8NGE3 313 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 OR10AG1Q8NH19 301 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 UBALD1Q8TB05 177 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 MRPL30Q8TCC3 161 aaKnown RBP2.65□□□□□ -1.99
PRPF39-209ENST00000556353 TOMM6Q96B49 74 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 B9D2Q9BPU9 175 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 LINC00574Q9H8X3 128 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 CKLFQ9UBR5 152 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 TMEM14AQ9Y6G1 99 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 MINOS1-NBL1R4GNA1 71 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 HLA-DRB4X5D2U9 266 aa2.65□□□□□ -1.99
PRPF39-209ENST00000556353 TRAV9-1A0A075B6T8 112 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 IGKV1D-13A0A0B4J2D9 117 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 TCRBV4S1A1TA0A5B7 111 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 ZNF736B4DX44 427 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-209ENST00000556353 C12orf77C9JDV5 145 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 H3BT86 120 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 GNGT2O14610 69 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 TRBV12-3P01733 135 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 IGKV1-13P0DP09 117 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 SLC25A4P12235 298 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 CRISP2P16562 243 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 LGALS3P17931 250 aaKnown RBP2.64□□□□□ -1.99
PRPF39-209ENST00000556353 BTCP35070 178 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 PSMB3P49720 205 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 MP68P56378 58 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 TAS2R45P59539 299 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 MOBPQ13875 183 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 PIGYQ3MUY2 71 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 PHF5AQ7RTV0 110 aaKnown RBP2.64□□□□□ -1.99
PRPF39-209ENST00000556353 RPP25LQ8N5L8 163 aaKnown RBP2.64□□□□□ -1.99
PRPF39-209ENST00000556353 ZNF709Q8N972 641 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 C15orf53Q8NAA6 179 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 MYOZ3Q8TDC0 251 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 HIST1H4GQ99525 98 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 SHANK2-AS3Q9BTD1 123 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 TXNL4BQ9NX01 149 aaKnown RBP2.64□□□□□ -1.99
PRPF39-209ENST00000556353 XCL2Q9UBD3 114 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 SPCS1Q9Y6A9 102 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 V9GY05 133 aa2.64□□□□□ -1.99
PRPF39-209ENST00000556353 LRP1BQ9NZR2 4599 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 TRBV20OR9-2A0A075B6H5 130 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 TRBV20-1A0A075B6N2 111 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 IGHV3-72A0A0B4J1Y9 119 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 TRBV27A0A0K0K1C4 114 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 TRBV7-7A0A0K0K1E9 115 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 LOC389332A0A1B0GUA5 103 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 FAM24AA6NFZ4 105 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 SNRPGP15A8MWD9 76 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 OOSP1A8MZH6 123 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 IGKV1D-33P01593 117 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 IGKV1-33P01594 117 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 IL5P05113 134 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 COX7CP15954 63 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 TAS2R19P59542 299 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 KIAA0087Q14695 138 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 KISS1Q15726 138 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 SP6Q3SY56 376 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 CASC10Q5T4H9 136 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 LYPD6Q86Y78 171 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 BPIFA4PQ86YQ2 179 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 Q8IYB0 196 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 LINC00337Q8N6G1 96 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 TMEM75Q8N9X5 138 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 C18orf32Q8TCD1 76 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 PPDPFLQ8WWR9 84 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 C11orf68Q9H3H3 251 aaKnown RBP2.63□□□□□ -1.99
PRPF39-209ENST00000556353 SLC25A22Q9H936 323 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 SLC39A9Q9NUM3 307 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 TAS2R4Q9NYW5 299 aa2.63□□□□□ -1.99
PRPF39-209ENST00000556353 APOBP04114 4563 aaKnown RBP2.63□□□□□ -1.99
PRPF39-209ENST00000556353 MUC4Q99102 2169 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 IGHV6-1A0A0B4J1U7 121 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 IGHV3-43A0A0B4J1X8 118 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 IGHV1-3A0A0C4DH29 117 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 MUC21A0A0G2JKD1 596 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 KANTRA0A1W2PQU2 76 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 RBMY1BA6NDE4 496 aaKnown RBP2.62□□□□□ -1.99
PRPF39-209ENST00000556353 RBMY1EA6NEQ0 496 aaKnown RBP2.62□□□□□ -1.99
PRPF39-209ENST00000556353 IGLL5B9A064 214 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 C17orf112F2Z3M2 114 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 J3QLW9 94 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 M0R378 163 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 M0R381 172 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 LST1O00453 97 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 SYNGR2O43760 224 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 TCRAP04437 139 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 RBMY1DP0C7P1 496 aaKnown RBP2.62□□□□□ -1.99
PRPF39-209ENST00000556353 RBMY1A1P0DJD3 496 aaKnown RBP2.62□□□□□ -1.99
PRPF39-209ENST00000556353 IGHV3-43DP0DP04 118 aa2.62□□□□□ -1.99
PRPF39-209ENST00000556353 SNRPGP62308 76 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms