RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 COPS9Q8WXC6 57 aa-0.34□□□□□ -2.46
SCFD1-218ENST00000556256 AQP10Q96PS8 301 aa-0.34□□□□□ -2.46
SCFD1-218ENST00000556256 LINC00472Q9H8W2 130 aa-0.34□□□□□ -2.46
SCFD1-218ENST00000556256 SPTBN4Q9H254 2564 aa-0.34□□□□□ -2.46
SCFD1-218ENST00000556256 CHD8Q9HCK8 2581 aa-0.34□□□□□ -2.46
SCFD1-218ENST00000556256 URB1O60287 2271 aaKnown RBP-0.34□□□□□ -2.46
SCFD1-218ENST00000556256 ZNF236Q9UL36 1845 aa-0.34□□□□□ -2.46
SCFD1-218ENST00000556256 PPRC1Q5VV67 1664 aaKnown RBP-0.34□□□□□ -2.46
SCFD1-218ENST00000556256 LRP6O75581 1613 aa-0.35□□□□□ -2.46
SCFD1-218ENST00000556256 SETXQ7Z333 2677 aaKnown RBP-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 PPIP5K1Q6PFW1 1433 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 FLNBO75369 2602 aaKnown RBP-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 PIGBOS1A0A0B4J2F0 54 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 GNG7O60262 68 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 BTG2P78543 158 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 SPAG11BQ08648 103 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 SPAG11AQ6PDA7 123 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 TTC9CQ8N5M4 171 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 ARL11Q969Q4 196 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 SPCS1Q9Y6A9 102 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 DOCK1Q14185 1865 aa-0.35□□□□□ -2.47
SCFD1-218ENST00000556256 KDM3BQ7LBC6 1761 aa-0.36□□□□□ -2.47
SCFD1-218ENST00000556256 CTXND1A0A1B0GTU2 59 aa-0.36□□□□□ -2.47
SCFD1-218ENST00000556256 I3L2K1 104 aa-0.36□□□□□ -2.47
SCFD1-218ENST00000556256 SPRR1AP35321 89 aa-0.36□□□□□ -2.47
SCFD1-218ENST00000556256 S100A12P80511 92 aa-0.36□□□□□ -2.47
SCFD1-218ENST00000556256 CCDC58Q4VC31 144 aa-0.36□□□□□ -2.47
SCFD1-218ENST00000556256 MEIG1Q5JSS6 88 aa-0.36□□□□□ -2.47
SCFD1-218ENST00000556256 PDZD2O15018 2839 aa-0.37□□□□□ -2.47
SCFD1-218ENST00000556256 ARAP2Q8WZ64 1704 aa-0.37□□□□□ -2.47
SCFD1-218ENST00000556256 HAMPP81172 84 aa-0.37□□□□□ -2.47
SCFD1-218ENST00000556256 KRTAP19-7Q3SYF9 63 aa-0.37□□□□□ -2.47
SCFD1-218ENST00000556256 NAA60Q9H7X0 242 aa-0.37□□□□□ -2.47
SCFD1-218ENST00000556256 V9GYH0 126 aa-0.37□□□□□ -2.47
SCFD1-218ENST00000556256 CNOT1A5YKK6 2376 aaKnown RBP-0.37□□□□□ -2.47
SCFD1-218ENST00000556256 MBD5Q9P267 1494 aa-0.37□□□□□ -2.47
SCFD1-218ENST00000556256 NBEAL1Q6ZS30 2694 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 HERC1Q15751 4861 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 RYR2Q92736 4967 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 LRRC37A2A6NM11 1700 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 TSC2P49815 1807 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 SPEF2Q9C093 1822 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 DNAJC13O75165 2243 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 EP300Q09472 2414 aaPredicted RBP-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 HIVEP1P15822 2718 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 K7EP13 123 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 TP53AIP1Q9HCN2 124 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 NDUFA4L2Q9NRX3 87 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 PATJQ8NI35 1801 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 DOCK2Q92608 1830 aa-0.38□□□□□ -2.47
SCFD1-218ENST00000556256 STAB2Q8WWQ8 2551 aa-0.39□□□□□ -2.47
SCFD1-218ENST00000556256 SVEP1Q4LDE5 3571 aa-0.39□□□□□ -2.47
SCFD1-218ENST00000556256 LOC100130705A0A1B0GUX0 176 aa-0.39□□□□□ -2.47
SCFD1-218ENST00000556256 Q56UQ5 140 aa-0.39□□□□□ -2.47
SCFD1-218ENST00000556256 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.39□□□□□ -2.47
SCFD1-218ENST00000556256 SPANXDQ9BXN6 97 aa-0.39□□□□□ -2.47
SCFD1-218ENST00000556256 UBR4Q5T4S7 5183 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 NF1P21359 2839 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 TRBV7-3A0A075B6L6 115 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 FAM25AB3EWG3 89 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 FAM25CB3EWG5 89 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 FAM25GB3EWG6 89 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 COX17Q14061 63 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 TMEM170BQ5T4T1 132 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 PPP3R2Q96LZ3 170 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 MGST2Q99735 147 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 FLGP20930 4061 aaPredicted RBP-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 FAT1Q14517 4588 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 C10orf71Q711Q0 1435 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 ERCC6L2Q5T890 1561 aa-0.4□□□□□ -2.47
SCFD1-218ENST00000556256 BCL9LQ86UU0 1499 aa-0.41□□□□□ -2.47
SCFD1-218ENST00000556256 PHLPP1O60346 1717 aa-0.41□□□□□ -2.47
SCFD1-218ENST00000556256 PKHD1P08F94 4074 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 F8VRH5 84 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 UQCR11O14957 56 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 HMGN1P05114 100 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 FGF7P21781 194 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 S100A3P33764 101 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 Q6JHZ5 121 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 BAGE2Q86Y30 109 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 TSLPQ969D9 159 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 DYNLRB1Q9NP97 96 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 LINC01558Q9Y6Z2 57 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 CPSF1Q10570 1443 aaKnown RBP-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 PSME4Q14997 1843 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 TGP01266 2768 aa-0.41□□□□□ -2.48
SCFD1-218ENST00000556256 MYH7P12883 1935 aa-0.42□□□□□ -2.48
SCFD1-218ENST00000556256 RIMS1Q86UR5 1692 aaKnown RBP-0.42□□□□□ -2.48
SCFD1-218ENST00000556256 FOCADQ5VW36 1801 aa-0.42□□□□□ -2.48
SCFD1-218ENST00000556256 SBF2Q86WG5 1849 aa-0.42□□□□□ -2.48
SCFD1-218ENST00000556256 USH2AO75445 5202 aa-0.42□□□□□ -2.48
SCFD1-218ENST00000556256 IGLC7A0M8Q6 106 aa-0.42□□□□□ -2.48
SCFD1-218ENST00000556256 BTAF1O14981 1849 aa-0.43□□□□□ -2.48
SCFD1-218ENST00000556256 MIF4GDA9UHW6 222 aaKnown RBP-0.43□□□□□ -2.48
SCFD1-218ENST00000556256 HMGN4O00479 90 aa-0.43□□□□□ -2.48
SCFD1-218ENST00000556256 SPRR2BP35325 72 aa-0.43□□□□□ -2.48
SCFD1-218ENST00000556256 TPPP2P59282 170 aa-0.43□□□□□ -2.48
SCFD1-218ENST00000556256 C5orf38Q86SI9 138 aa-0.43□□□□□ -2.48
SCFD1-218ENST00000556256 CREBBPQ92793 2442 aa-0.44□□□□□ -2.48
SCFD1-218ENST00000556256 RYR1P21817 5038 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms