RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 PPDPFQ9H3Y8 114 aa6.07□□□□□ -1.44
SYNE2-220ENST00000555612 FOXI1Q12951 378 aa6.07□□□□□ -1.44
SYNE2-220ENST00000555612 WFDC9Q8NEX5 89 aa6.07□□□□□ -1.44
SYNE2-220ENST00000555612 MED12LQ86YW9 2145 aa6.07□□□□□ -1.44
SYNE2-220ENST00000555612 JMJD7-PLA2G4BH0Y9G9 81 aa6.07□□□□□ -1.44
SYNE2-220ENST00000555612 CEP295Q9C0D2 2601 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 ALPK3Q96L96 1907 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 IGKV2-28A0A075B6P5 120 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 IGKV2D-28P01615 120 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 UBE2D4Q9Y2X8 147 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 A0A1W2PPR1 153 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 M0QY20 66 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 IGKV4-1P06312 121 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 DCANP1Q8TF63 244 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 DOPEY1Q5JWR5 2465 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 LELP1Q5T871 98 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 SPANXCQ9NY87 97 aa6.06□□□□□ -1.44
SYNE2-220ENST00000555612 TNRC6BQ9UPQ9 1833 aaKnown RBP6.05□□□□□ -1.44
SYNE2-220ENST00000555612 A0A1B0GXF2 115 aa6.05□□□□□ -1.44
SYNE2-220ENST00000555612 TMEM256-PLSCR3K7ERE1 68 aa6.05□□□□□ -1.44
SYNE2-220ENST00000555612 IGLV2-8P01709 118 aa6.05□□□□□ -1.44
SYNE2-220ENST00000555612 A0A0J9YXY3 114 aa6.05□□□□□ -1.44
SYNE2-220ENST00000555612 TRBV10-2A0A0K0K1G8 114 aa6.05□□□□□ -1.44
SYNE2-220ENST00000555612 EDN2P20800 178 aa6.05□□□□□ -1.44
SYNE2-220ENST00000555612 IGLV4-3A0A075B6K6 122 aa6.05□□□□□ -1.44
SYNE2-220ENST00000555612 ACYP1P07311 99 aa6.05□□□□□ -1.44
SYNE2-220ENST00000555612 KIAA1549LQ6ZVL6 1849 aa6.05□□□□□ -1.44
SYNE2-220ENST00000555612 A0A0B4J2C4 111 aa6.04□□□□□ -1.44
SYNE2-220ENST00000555612 TDRG1Q3Y452 100 aa6.04□□□□□ -1.44
SYNE2-220ENST00000555612 SPINK6Q6UWN8 80 aa6.04□□□□□ -1.44
SYNE2-220ENST00000555612 HRCT1Q6UXD1 115 aa6.04□□□□□ -1.44
SYNE2-220ENST00000555612 HIGD1BQ9P298 99 aa6.04□□□□□ -1.44
SYNE2-220ENST00000555612 PRR9Q5T870 116 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 U3KQK5 164 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 JMJD1CQ15652 2540 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 SPANXDQ9BXN6 97 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 SVIPQ8NHG7 77 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 UBE2D3P61077 147 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 MRGPRG-AS1Q2M3A8 158 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 CRIP1P50238 77 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 ODF3L2Q3SX64 289 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 MLST8Q9BVC4 326 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 CEP192Q8TEP8 1941 aa6.03□□□□□ -1.44
SYNE2-220ENST00000555612 PIK3CD-AS1Q5SR53 167 aa6.02□□□□□ -1.45
SYNE2-220ENST00000555612 SRCAPQ6ZRS2 3230 aa6.02□□□□□ -1.45
SYNE2-220ENST00000555612 LOC107984640A0A0U1RRK4 108 aa6.02□□□□□ -1.45
SYNE2-220ENST00000555612 ZNF22P17026 224 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-220ENST00000555612 CD164L2Q6UWJ8 174 aa6.02□□□□□ -1.45
SYNE2-220ENST00000555612 IGLV4-69A0A075B6H9 119 aa6.02□□□□□ -1.45
SYNE2-220ENST00000555612 RPL37AP8A6NKH3 93 aa6.02□□□□□ -1.45
SYNE2-220ENST00000555612 IBA57-AS1B1ANH7 110 aa6.02□□□□□ -1.45
SYNE2-220ENST00000555612 SLPIP03973 132 aa6.01□□□□□ -1.45
SYNE2-220ENST00000555612 BPY2O14599 106 aa6.01□□□□□ -1.45
SYNE2-220ENST00000555612 IGLV1-51P01701 117 aa6.01□□□□□ -1.45
SYNE2-220ENST00000555612 RNASE3P12724 160 aaKnown RBP6.01□□□□□ -1.45
SYNE2-220ENST00000555612 CASC2Q6XLA1 102 aa6.01□□□□□ -1.45
SYNE2-220ENST00000555612 ZNF706Q9Y5V0 76 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-220ENST00000555612 Q6ZTC4 211 aa6.01□□□□□ -1.45
SYNE2-220ENST00000555612 LINC00959A0A1B0GUT2 108 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 PLAC8L1A1L4L8 177 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 A8MZ25 164 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 SPANXB1Q9NS25 103 aaPredicted RBP6□□□□□ -1.45
SYNE2-220ENST00000555612 TMEM223A0PJW6 202 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 KLLNB2CW77 178 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 IGLV9-49A0A0B4J1Y8 123 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 C16orf95Q9H693 158 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 NUP210LQ5VU65 1888 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 PDE6GP18545 87 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 TRAV23DV6A0A075B6W5 121 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 IGLV5-52A0A0A0MRZ9 124 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 UPK3BQ9BT76 320 aa6□□□□□ -1.45
SYNE2-220ENST00000555612 TAX1BP3O14907 124 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 C11orf21Q9P2W6 132 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 DSCAML1Q8TD84 2053 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 TMEM258P61165 79 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 C6orf99Q4VX62 202 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 TSHBP01222 138 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 SEC61GP60059 68 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 TEN1Q86WV5 123 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 C1orf158Q8N1D5 194 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 LINC00308Q8TCZ7 52 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 CHD8Q9HCK8 2581 aa5.99□□□□□ -1.45
SYNE2-220ENST00000555612 SCXQ7RTU7 201 aa5.98□□□□□ -1.45
SYNE2-220ENST00000555612 RNF185Q96GF1 192 aa5.98□□□□□ -1.45
SYNE2-220ENST00000555612 LINC00474Q9P2X8 69 aa5.98□□□□□ -1.45
SYNE2-220ENST00000555612 TLN1Q9Y490 2541 aaKnown RBP5.98□□□□□ -1.45
SYNE2-220ENST00000555612 H3BT86 120 aa5.98□□□□□ -1.45
SYNE2-220ENST00000555612 IGLV2-11P01706 119 aa5.98□□□□□ -1.45
SYNE2-220ENST00000555612 WFDC2Q14508 124 aa5.98□□□□□ -1.45
SYNE2-220ENST00000555612 ARHGAP21Q5T5U3 1957 aa5.98□□□□□ -1.45
SYNE2-220ENST00000555612 TRBV27A0A0K0K1C4 114 aa5.98□□□□□ -1.45
SYNE2-220ENST00000555612 M0R378 163 aa5.97□□□□□ -1.45
SYNE2-220ENST00000555612 G3V4G9 280 aa5.97□□□□□ -1.45
SYNE2-220ENST00000555612 RNASE8Q8TDE3 154 aaKnown RBP5.97□□□□□ -1.45
SYNE2-220ENST00000555612 FAM236AA0A1B0GUQ0 79 aa5.97□□□□□ -1.45
SYNE2-220ENST00000555612 FAM236BA0A1B0GV22 79 aa5.97□□□□□ -1.45
SYNE2-220ENST00000555612 UBE2D2P62837 147 aa5.97□□□□□ -1.45
SYNE2-220ENST00000555612 WFDC10BQ8IUB3 73 aa5.97□□□□□ -1.45
SYNE2-220ENST00000555612 C1orf134Q5TEV5 83 aa5.97□□□□□ -1.45
SYNE2-220ENST00000555612 TRBV6-5A0A0K0K1A5 114 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms