RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 KRTAP20-2Q3LI61 65 aa-0.53□□□□□ -2.49
SRP54-207ENST00000555535 SPANXA1Q9NS26 97 aa-0.53□□□□□ -2.49
SRP54-207ENST00000555535 FMN2Q9NZ56 1722 aa-0.53□□□□□ -2.49
SRP54-207ENST00000555535 ARHGEF12Q9NZN5 1544 aa-0.54□□□□□ -2.5
SRP54-207ENST00000555535 FHAD1B1AJZ9 1412 aa-0.54□□□□□ -2.5
SRP54-207ENST00000555535 PRG4Q92954 1404 aaPredicted RBP-0.54□□□□□ -2.5
SRP54-207ENST00000555535 NF1P21359 2839 aa-0.54□□□□□ -2.5
SRP54-207ENST00000555535 M0R2T5 61 aa-0.54□□□□□ -2.5
SRP54-207ENST00000555535 ARPC5O15511 151 aa-0.54□□□□□ -2.5
SRP54-207ENST00000555535 HIST1H1DP16402 221 aaKnown RBP-0.54□□□□□ -2.5
SRP54-207ENST00000555535 BAGE2Q86Y30 109 aa-0.54□□□□□ -2.5
SRP54-207ENST00000555535 SDF2Q99470 211 aa-0.54□□□□□ -2.5
SRP54-207ENST00000555535 ZNF518AQ6AHZ1 1483 aa-0.54□□□□□ -2.5
SRP54-207ENST00000555535 FOCADQ5VW36 1801 aa-0.54□□□□□ -2.5
SRP54-207ENST00000555535 DOPEY1Q5JWR5 2465 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 NEBP20929 6669 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 PHLPP1O60346 1717 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 CEP152O94986 1710 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 ATRQ13535 2644 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 ANKRD36A6QL64 1941 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 SIX6O95475 246 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 COPZ1P61923 177 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 COX17Q14061 63 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 SCIMPQ6UWF3 145 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 TSLPQ969D9 159 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 PDCD10Q9BUL8 212 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 IFT140Q96RY7 1462 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 PPIP5K1Q6PFW1 1433 aa-0.55□□□□□ -2.5
SRP54-207ENST00000555535 SVEP1Q4LDE5 3571 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 F8VRH5 84 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 SPINK4O60575 86 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 TSPAN19P0C672 248 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 SCGB1A1P11684 91 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 GUCA1AP43080 201 aaPredicted RBP-0.56□□□□□ -2.5
SRP54-207ENST00000555535 DEFB105AQ8NG35 78 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 LENEPQ9Y5L5 61 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 HIVEP1P15822 2718 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 POLA1P09884 1462 aaPredicted RBP-0.56□□□□□ -2.5
SRP54-207ENST00000555535 IQSEC2Q5JU85 1478 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 PXDNQ92626 1479 aa-0.56□□□□□ -2.5
SRP54-207ENST00000555535 RIMS1Q86UR5 1692 aaKnown RBP-0.56□□□□□ -2.5
SRP54-207ENST00000555535 ANKRD30AQ9BXX3 1397 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 FLGP20930 4061 aaPredicted RBP-0.57□□□□□ -2.5
SRP54-207ENST00000555535 NBEAL1Q6ZS30 2694 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 SYS1-DBNDD2H3BUS1 97 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 NCR2O95944 276 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 APOC3P02656 99 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 RPS25P62851 125 aaKnown RBP-0.57□□□□□ -2.5
SRP54-207ENST00000555535 SMCO1Q147U7 214 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 FDCSPQ8NFU4 85 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 LINC00472Q9H8W2 130 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 COPZ2Q9P299 210 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 STAB2Q8WWQ8 2551 aa-0.57□□□□□ -2.5
SRP54-207ENST00000555535 PCNX1Q96RV3 2341 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 HMGXB3Q12766 1538 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 PDCD11Q14690 1871 aaKnown RBP-0.58□□□□□ -2.5
SRP54-207ENST00000555535 SCN7AQ01118 1682 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 PIGBOS1A0A0B4J2F0 54 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 IGLC7A0M8Q6 106 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 UQCR11O14957 56 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 Q6AWC8 147 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 AKAP14Q86UN6 197 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 AMELXQ99217 191 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 NDUFA4L2Q9NRX3 87 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 MYOM3Q5VTT5 1437 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 BICRAQ9NZM4 1560 aa-0.58□□□□□ -2.5
SRP54-207ENST00000555535 SPAARA0A1B0GVQ0 90 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 B2MP61769 119 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 ALX1Q15699 326 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 Q8N8P6 123 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 PYDC1Q8WXC3 89 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 LSM10Q969L4 123 aaKnown RBP-0.59□□□□□ -2.5
SRP54-207ENST00000555535 TCEAL4Q96EI5 215 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 DYNLRB1Q9NP97 96 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 APLNQ9ULZ1 77 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 PKHD1P08F94 4074 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 FAT1Q14517 4588 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 ROBO1Q9Y6N7 1651 aa-0.59□□□□□ -2.5
SRP54-207ENST00000555535 KIAA0556O60303 1618 aa-0.6□□□□□ -2.5
SRP54-207ENST00000555535 RAPGEF6Q8TEU7 1601 aa-0.6□□□□□ -2.5
SRP54-207ENST00000555535 GAPVD1Q14C86 1478 aa-0.6□□□□□ -2.5
SRP54-207ENST00000555535 HMGN4O00479 90 aa-0.6□□□□□ -2.51
SRP54-207ENST00000555535 TPPP2P59282 170 aa-0.6□□□□□ -2.51
SRP54-207ENST00000555535 SMIM21Q3B7S5 101 aa-0.6□□□□□ -2.51
SRP54-207ENST00000555535 ANP32BQ92688 251 aaKnown RBP-0.6□□□□□ -2.51
SRP54-207ENST00000555535 DPH3Q96FX2 82 aa-0.6□□□□□ -2.51
SRP54-207ENST00000555535 MGST2Q99735 147 aa-0.6□□□□□ -2.51
SRP54-207ENST00000555535 TMEM191AQ9H0A3 160 aa-0.6□□□□□ -2.51
SRP54-207ENST00000555535 PAPPA2Q9BXP8 1791 aa-0.6□□□□□ -2.51
SRP54-207ENST00000555535 NUP188Q5SRE5 1749 aa-0.61□□□□□ -2.51
SRP54-207ENST00000555535 ARHGEF5Q12774 1597 aa-0.61□□□□□ -2.51
SRP54-207ENST00000555535 TET3O43151 1660 aa-0.61□□□□□ -2.51
SRP54-207ENST00000555535 TRBV7-3A0A075B6L6 115 aa-0.61□□□□□ -2.51
SRP54-207ENST00000555535 MIF4GDA9UHW6 222 aaKnown RBP-0.61□□□□□ -2.51
SRP54-207ENST00000555535 SFT2D2O95562 160 aa-0.61□□□□□ -2.51
SRP54-207ENST00000555535 UBA52P62987 128 aaKnown RBP-0.61□□□□□ -2.51
SRP54-207ENST00000555535 DEFB135Q30KP9 77 aa-0.61□□□□□ -2.51
SRP54-207ENST00000555535 KRTAP6-2Q3LI66 62 aa-0.61□□□□□ -2.51
SRP54-207ENST00000555535 MAFIPQ8WZ33 124 aa-0.61□□□□□ -2.51
SRP54-207ENST00000555535 PFDN5Q99471 154 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms