RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 JMJD1CQ15652 2540 aa17.17■□□□□ 0.34
STRN3-207ENST00000555358 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.17■□□□□ 0.34
STRN3-207ENST00000555358 A8MTW9 85 aa17.17■□□□□ 0.34
STRN3-207ENST00000555358 HTN1P15515 57 aa17.17■□□□□ 0.34
STRN3-207ENST00000555358 XGP55808 180 aa17.17■□□□□ 0.34
STRN3-207ENST00000555358 Q6ZUT4 128 aa17.17■□□□□ 0.34
STRN3-207ENST00000555358 TIMM21Q9BVV7 248 aa17.17■□□□□ 0.34
STRN3-207ENST00000555358 M0QXV9 152 aa17.16■□□□□ 0.34
STRN3-207ENST00000555358 SLC25A20O43772 301 aa17.16■□□□□ 0.34
STRN3-207ENST00000555358 Q9UF83 564 aa17.16■□□□□ 0.34
STRN3-207ENST00000555358 NACAE9PAV3 2078 aa17.15■□□□□ 0.34
STRN3-207ENST00000555358 RBMY1BA6NDE4 496 aaKnown RBP17.15■□□□□ 0.34
STRN3-207ENST00000555358 RBMY1EA6NEQ0 496 aaKnown RBP17.15■□□□□ 0.34
STRN3-207ENST00000555358 H7C2G1 150 aa17.15■□□□□ 0.34
STRN3-207ENST00000555358 SPINK8P0C7L1 97 aa17.15■□□□□ 0.34
STRN3-207ENST00000555358 RBMY1DP0C7P1 496 aaKnown RBP17.15■□□□□ 0.34
STRN3-207ENST00000555358 TRAV8-3A0A0A6YYJ7 113 aa17.15■□□□□ 0.34
STRN3-207ENST00000555358 PRM2P04554 102 aa17.15■□□□□ 0.34
STRN3-207ENST00000555358 C9JAW5 83 aa17.14■□□□□ 0.33
STRN3-207ENST00000555358 MAP6D1Q9H9H5 199 aa17.14■□□□□ 0.33
STRN3-207ENST00000555358 CKS1BP61024 79 aa17.13■□□□□ 0.33
STRN3-207ENST00000555358 Q6ZSN1 163 aa17.13■□□□□ 0.33
STRN3-207ENST00000555358 TNFRSF18Q9Y5U5 241 aa17.13■□□□□ 0.33
STRN3-207ENST00000555358 H3BMM0 161 aa17.13■□□□□ 0.33
STRN3-207ENST00000555358 RNASE13Q5GAN3 156 aaKnown RBP17.13■□□□□ 0.33
STRN3-207ENST00000555358 CHCHD7Q9BUK0 85 aa17.13■□□□□ 0.33
STRN3-207ENST00000555358 IGHV1-58A0A0C4DH39 117 aa17.12■□□□□ 0.33
STRN3-207ENST00000555358 TENM1Q9UKZ4 2725 aa17.12■□□□□ 0.33
STRN3-207ENST00000555358 UBE2D4Q9Y2X8 147 aa17.11■□□□□ 0.33
STRN3-207ENST00000555358 PIK3CD-AS1Q5SR53 167 aa17.1■□□□□ 0.33
STRN3-207ENST00000555358 ADAMTSL4-AS1Q5T5F5 129 aa17.1■□□□□ 0.33
STRN3-207ENST00000555358 TINCRA0A1B0GVN0 87 aa17.09■□□□□ 0.33
STRN3-207ENST00000555358 Q1RN00 199 aa17.09■□□□□ 0.33
STRN3-207ENST00000555358 TRAV25A0A0B4J276 109 aa17.09■□□□□ 0.33
STRN3-207ENST00000555358 CYSRT1A8MQ03 144 aa17.09■□□□□ 0.33
STRN3-207ENST00000555358 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.09■□□□□ 0.33
STRN3-207ENST00000555358 VSIG2Q96IQ7 327 aa17.09■□□□□ 0.33
STRN3-207ENST00000555358 SPANXDQ9BXN6 97 aa17.09■□□□□ 0.33
STRN3-207ENST00000555358 SPANXCQ9NY87 97 aa17.09■□□□□ 0.33
STRN3-207ENST00000555358 TRBV30A0A0K0K1B3 111 aa17.08■□□□□ 0.33
STRN3-207ENST00000555358 SPANXA1Q9NS26 97 aa17.08■□□□□ 0.33
STRN3-207ENST00000555358 NDUFA12Q9UI09 145 aa17.08■□□□□ 0.33
STRN3-207ENST00000555358 ZNF415Q09FC8 603 aa17.08■□□□□ 0.32
STRN3-207ENST00000555358 ATXN8Q156A1 80 aa17.08■□□□□ 0.32
STRN3-207ENST00000555358 ODF3L2Q3SX64 289 aa17.08■□□□□ 0.32
STRN3-207ENST00000555358 TRIAP1O43715 76 aa17.07■□□□□ 0.32
STRN3-207ENST00000555358 LINC01620Q4KN68 170 aa17.07■□□□□ 0.32
STRN3-207ENST00000555358 LINC01600Q96MT4 127 aa17.06■□□□□ 0.32
STRN3-207ENST00000555358 ATRQ13535 2644 aa17.06■□□□□ 0.32
STRN3-207ENST00000555358 TEP1Q99973 2627 aaKnown RBP17.06■□□□□ 0.32
STRN3-207ENST00000555358 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.06■□□□□ 0.32
STRN3-207ENST00000555358 IGKV2-29A2NJV5 120 aaPredicted RBP17.06■□□□□ 0.32
STRN3-207ENST00000555358 A8MZ25 164 aa17.06■□□□□ 0.32
STRN3-207ENST00000555358 C11orf72Q8NBR9 251 aa17.05■□□□□ 0.32
STRN3-207ENST00000555358 LINC00467Q9BRT7 94 aa17.05■□□□□ 0.32
STRN3-207ENST00000555358 VWFP04275 2813 aa17.04■□□□□ 0.32
STRN3-207ENST00000555358 TMEM262E9PQX1 116 aa17.04■□□□□ 0.32
STRN3-207ENST00000555358 PRSS2P07478 247 aa17.04■□□□□ 0.32
STRN3-207ENST00000555358 MIAQ16674 131 aa17.04■□□□□ 0.32
STRN3-207ENST00000555358 IGLV1-51P01701 117 aa17.03■□□□□ 0.32
STRN3-207ENST00000555358 PF4P02776 101 aa17.03■□□□□ 0.32
STRN3-207ENST00000555358 IGHV3-53P01767 116 aa17.02■□□□□ 0.32
STRN3-207ENST00000555358 GEMIN7Q9H840 131 aaKnown RBP17.02■□□□□ 0.32
STRN3-207ENST00000555358 ZFAND6Q6FIF0 208 aa17.02■□□□□ 0.32
STRN3-207ENST00000555358 NTN5Q8WTR8 489 aaPredicted RBP17.02■□□□□ 0.32
STRN3-207ENST00000555358 IGHV3-38A0A0C4DH36 116 aa17.01■□□□□ 0.31
STRN3-207ENST00000555358 LINC00482Q8N8I6 264 aa17.01■□□□□ 0.31
STRN3-207ENST00000555358 DNAJC30Q96LL9 226 aa17.01■□□□□ 0.31
STRN3-207ENST00000555358 ICOSQ9Y6W8 199 aa17.01■□□□□ 0.31
STRN3-207ENST00000555358 NOTCH3Q9UM47 2321 aa17■□□□□ 0.31
STRN3-207ENST00000555358 TRBV10-2A0A0K0K1G8 114 aa17■□□□□ 0.31
STRN3-207ENST00000555358 BEAN1Q3B7T3 259 aa17■□□□□ 0.31
STRN3-207ENST00000555358 SPATA3Q8NHX4 192 aa17■□□□□ 0.31
STRN3-207ENST00000555358 LINC01587Q99440 93 aa16.99■□□□□ 0.31
STRN3-207ENST00000555358 RNF183Q96D59 192 aa16.98■□□□□ 0.31
STRN3-207ENST00000555358 RS1O15537 224 aa16.98■□□□□ 0.31
STRN3-207ENST00000555358 RPL13AP40429 203 aaKnown RBP16.98■□□□□ 0.31
STRN3-207ENST00000555358 NPC2P61916 151 aa16.98■□□□□ 0.31
STRN3-207ENST00000555358 CDKN2A-AS1Q9UH64 79 aa16.97■□□□□ 0.31
STRN3-207ENST00000555358 IGLV5-45A0A087WSX0 123 aa16.97■□□□□ 0.31
STRN3-207ENST00000555358 TIMM17BO60830 172 aa16.97■□□□□ 0.31
STRN3-207ENST00000555358 WFDC10AQ9H1F0 79 aa16.97■□□□□ 0.31
STRN3-207ENST00000555358 CITED1Q99966 193 aa16.96■□□□□ 0.31
STRN3-207ENST00000555358 TIRAPP58753 221 aa16.96■□□□□ 0.3
STRN3-207ENST00000555358 TEX49A0A1B0GTD5 131 aa16.95■□□□□ 0.3
STRN3-207ENST00000555358 STHQ8IWL8 128 aa16.95■□□□□ 0.3
STRN3-207ENST00000555358 INSP01308 110 aa16.94■□□□□ 0.3
STRN3-207ENST00000555358 TRRAPQ9Y4A5 3859 aa16.94■□□□□ 0.3
STRN3-207ENST00000555358 TMEM101Q96IK0 257 aa16.94■□□□□ 0.3
STRN3-207ENST00000555358 NDUFA1O15239 70 aa16.93■□□□□ 0.3
STRN3-207ENST00000555358 TRAV26-1A0A087WT03 109 aa16.93■□□□□ 0.3
STRN3-207ENST00000555358 H7C423 109 aa16.93■□□□□ 0.3
STRN3-207ENST00000555358 IFITM1P13164 125 aa16.92■□□□□ 0.3
STRN3-207ENST00000555358 C19orf73Q9NVV2 129 aa16.92■□□□□ 0.3
STRN3-207ENST00000555358 XCL2Q9UBD3 114 aa16.92■□□□□ 0.3
STRN3-207ENST00000555358 COX6A2Q02221 97 aa16.92■□□□□ 0.3
STRN3-207ENST00000555358 DAND5Q8N907 189 aa16.92■□□□□ 0.3
STRN3-207ENST00000555358 IGHV3OR16-12A0A075B7B8 117 aa16.9■□□□□ 0.3
STRN3-207ENST00000555358 COX6CP09669 75 aa16.9■□□□□ 0.3
STRN3-207ENST00000555358 CLEC2BQ92478 149 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms