RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 REG3AQ06141 175 aa8.49□□□□□ -1.05
SYNE2-219ENST00000555323 MIAQ16674 131 aa8.49□□□□□ -1.05
SYNE2-219ENST00000555323 C2orf66Q6UXQ4 117 aa8.49□□□□□ -1.05
SYNE2-219ENST00000555323 ZNF664Q8N3J9 261 aa8.49□□□□□ -1.05
SYNE2-219ENST00000555323 OR5A1Q8NGJ0 315 aa8.49□□□□□ -1.05
SYNE2-219ENST00000555323 FAM104AQ969W3 186 aa8.49□□□□□ -1.05
SYNE2-219ENST00000555323 UBE2WQ96B02 151 aa8.49□□□□□ -1.05
SYNE2-219ENST00000555323 AP5S1Q9NUS5 200 aa8.49□□□□□ -1.05
SYNE2-219ENST00000555323 CYSLTR1Q9Y271 337 aa8.49□□□□□ -1.05
SYNE2-219ENST00000555323 IGIPA6NJ69 53 aa8.48□□□□□ -1.05
SYNE2-219ENST00000555323 DGAT2L7PQ6IED9 249 aa8.48□□□□□ -1.05
SYNE2-219ENST00000555323 TOMM6Q96B49 74 aa8.48□□□□□ -1.05
SYNE2-219ENST00000555323 CHCHD1Q96BP2 118 aaKnown RBP8.48□□□□□ -1.05
SYNE2-219ENST00000555323 RYR3Q15413 4870 aa8.48□□□□□ -1.05
SYNE2-219ENST00000555323 TRAV8-4A0A0B4J246 113 aa8.47□□□□□ -1.05
SYNE2-219ENST00000555323 CRPP02741 224 aa8.47□□□□□ -1.05
SYNE2-219ENST00000555323 TM2D2Q9BX73 214 aa8.47□□□□□ -1.05
SYNE2-219ENST00000555323 COX11Q9Y6N1 276 aa8.47□□□□□ -1.05
SYNE2-219ENST00000555323 LINC00336Q6ZUF6 198 aa8.46□□□□□ -1.06
SYNE2-219ENST00000555323 RMI2Q96E14 147 aa8.46□□□□□ -1.06
SYNE2-219ENST00000555323 Q9HAA7 133 aa8.46□□□□□ -1.06
SYNE2-219ENST00000555323 DNAH17Q9UFH2 4485 aa8.46□□□□□ -1.06
SYNE2-219ENST00000555323 A0A096LNJ9 63 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 CCL25O15444 150 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST1H2BKO60814 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST1H2BJP06899 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST1H2BOP23527 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST1H2BBP33778 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST1H2BDP58876 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST1H2BCP62807 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST2H2BEQ16778 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-219ENST00000555323 KRTAP26-1Q6PEX3 210 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 ERASQ7Z444 233 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 BAGE3Q86Y29 109 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST1H2BHQ93079 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 TIMM17AQ99595 171 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST1H2BNQ99877 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 HIST1H2BMQ99879 126 aa8.45□□□□□ -1.06
SYNE2-219ENST00000555323 DNAH10Q8IVF4 4471 aa8.44□□□□□ -1.06
SYNE2-219ENST00000555323 IGLV4-3A0A075B6K6 122 aa8.44□□□□□ -1.06
SYNE2-219ENST00000555323 CLPSL2Q6UWE3 100 aa8.44□□□□□ -1.06
SYNE2-219ENST00000555323 Q6ZUT4 128 aa8.44□□□□□ -1.06
SYNE2-219ENST00000555323 OPRPNQ99935 248 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-219ENST00000555323 C1orf43Q9BWL3 253 aa8.44□□□□□ -1.06
SYNE2-219ENST00000555323 IGKV2D-24A0A075B6R9 120 aa8.43□□□□□ -1.06
SYNE2-219ENST00000555323 LINC00959A0A1B0GUT2 108 aa8.43□□□□□ -1.06
SYNE2-219ENST00000555323 HBDP02042 147 aa8.43□□□□□ -1.06
SYNE2-219ENST00000555323 LINC00310P59036 64 aa8.43□□□□□ -1.06
SYNE2-219ENST00000555323 MAPKAPK5-AS1Q8N8E1 139 aa8.43□□□□□ -1.06
SYNE2-219ENST00000555323 TMEM141Q96I45 108 aa8.43□□□□□ -1.06
SYNE2-219ENST00000555323 AMELXQ99217 191 aa8.43□□□□□ -1.06
SYNE2-219ENST00000555323 PDZD11Q5EBL8 140 aa8.42□□□□□ -1.06
SYNE2-219ENST00000555323 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
SYNE2-219ENST00000555323 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
SYNE2-219ENST00000555323 FRAS1Q86XX4 4008 aa8.42□□□□□ -1.06
SYNE2-219ENST00000555323 FAT2Q9NYQ8 4349 aa8.42□□□□□ -1.06
SYNE2-219ENST00000555323 LRCOL1A6NCL2 159 aa8.41□□□□□ -1.06
SYNE2-219ENST00000555323 PRSS29PA6NIE9 313 aa8.41□□□□□ -1.06
SYNE2-219ENST00000555323 C1orf196B1AJZ1 125 aa8.41□□□□□ -1.06
SYNE2-219ENST00000555323 NUPR1O60356 82 aa8.41□□□□□ -1.06
SYNE2-219ENST00000555323 HSBP1O75506 76 aa8.41□□□□□ -1.06
SYNE2-219ENST00000555323 SERF1AO75920 110 aa8.41□□□□□ -1.06
SYNE2-219ENST00000555323 TNP2Q05952 138 aa8.41□□□□□ -1.06
SYNE2-219ENST00000555323 SS18Q15532 418 aa8.41□□□□□ -1.06
SYNE2-219ENST00000555323 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
SYNE2-219ENST00000555323 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
SYNE2-219ENST00000555323 VCX2Q9H322 139 aa8.41□□□□□ -1.06
SYNE2-219ENST00000555323 IGLV10-54A0A075B6I4 117 aa8.4□□□□□ -1.06
SYNE2-219ENST00000555323 IGKV3OR2-268A0A0C4DH90 116 aa8.4□□□□□ -1.06
SYNE2-219ENST00000555323 PSCAO43653 123 aa8.4□□□□□ -1.06
SYNE2-219ENST00000555323 PMCHL1Q16048 86 aa8.4□□□□□ -1.06
SYNE2-219ENST00000555323 Q6ZN92 141 aa8.4□□□□□ -1.06
SYNE2-219ENST00000555323 TEX43Q6ZNM6 134 aa8.4□□□□□ -1.06
SYNE2-219ENST00000555323 LINC00173Q6ZV60 143 aa8.4□□□□□ -1.06
SYNE2-219ENST00000555323 CHCHD10Q8WYQ3 142 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-219ENST00000555323 A0A087WTM6 91 aa8.39□□□□□ -1.07
SYNE2-219ENST00000555323 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-219ENST00000555323 CD164L2Q6UWJ8 174 aa8.39□□□□□ -1.07
SYNE2-219ENST00000555323 FAM19A3Q7Z5A8 133 aa8.39□□□□□ -1.07
SYNE2-219ENST00000555323 TRAV13-1A0A0B4J241 112 aa8.38□□□□□ -1.07
SYNE2-219ENST00000555323 ATP5LO75964 103 aa8.38□□□□□ -1.07
SYNE2-219ENST00000555323 UBE2D1P51668 147 aa8.38□□□□□ -1.07
SYNE2-219ENST00000555323 FAM19A2Q8N3H0 131 aa8.38□□□□□ -1.07
SYNE2-219ENST00000555323 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
SYNE2-219ENST00000555323 A0A1B0GVY2 172 aa8.37□□□□□ -1.07
SYNE2-219ENST00000555323 GAGE12HA6NDE8 117 aa8.37□□□□□ -1.07
SYNE2-219ENST00000555323 IFITM10A6NMD0 228 aa8.37□□□□□ -1.07
SYNE2-219ENST00000555323 FOXI1Q12951 378 aa8.37□□□□□ -1.07
SYNE2-219ENST00000555323 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
SYNE2-219ENST00000555323 BAALCQ8WXS3 180 aa8.37□□□□□ -1.07
SYNE2-219ENST00000555323 CST9LQ9H4G1 147 aa8.37□□□□□ -1.07
SYNE2-219ENST00000555323 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
SYNE2-219ENST00000555323 XCL1P47992 114 aa8.36□□□□□ -1.07
SYNE2-219ENST00000555323 PMVKQ15126 192 aa8.36□□□□□ -1.07
SYNE2-219ENST00000555323 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
SYNE2-219ENST00000555323 WFDC2Q14508 124 aa8.35□□□□□ -1.07
SYNE2-219ENST00000555323 EREGO14944 169 aa8.34□□□□□ -1.07
SYNE2-219ENST00000555323 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
SYNE2-219ENST00000555323 NDUFA6P56556 154 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms